BLASTX nr result

ID: Ephedra25_contig00016447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00016447
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564833.1| PREDICTED: uncharacterized protein LOC100839...    63   3e-08
ref|XP_004970896.1| PREDICTED: uncharacterized protein LOC101764...    60   3e-07
ref|XP_004970895.1| PREDICTED: uncharacterized protein LOC101764...    60   3e-07
gb|ACN34040.1| unknown [Zea mays] gi|414879228|tpg|DAA56359.1| T...    55   7e-06

>ref|XP_003564833.1| PREDICTED: uncharacterized protein LOC100839383 [Brachypodium
           distachyon]
          Length = 508

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
 Frame = -3

Query: 400 LSKMCNSVDYCESLFTENGIQFR---------NCEKALSHIDDLPXXXXXXXXXXXXXXX 248
           +SK C S   CESLFT N I+FR         N   ++SH DD                 
Sbjct: 381 MSKECKSAGSCESLFTGNNIKFRKAYDYSLVQNDGHSVSHTDDKDLTRSSHKRKRDRKRR 440

Query: 247 XXXXXXXXRTEDEYLNCSSDEDIATEYNHSISSSASQGKWLLSTDNFALTWNMADLAEHL 68
                      D+     S       +N   +  +  G W LSTD+F+ +W++AD+ +HL
Sbjct: 441 SHKYDSEEDNYDQLFELGS-------FNGKRAIESQYGSWYLSTDDFSASWDIADIPDHL 493

Query: 67  ALYSLRKWLNYAI*RCYR 14
           + + LR W+ +A   C+R
Sbjct: 494 STHYLRVWVKWA---CFR 508


>ref|XP_004970896.1| PREDICTED: uncharacterized protein LOC101764908 isoform X2 [Setaria
           italica]
          Length = 438

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
 Frame = -3

Query: 400 LSKMCNSVDYCESLFTENGIQFRNCEK---------ALSHIDDLPXXXXXXXXXXXXXXX 248
           LSK C S + CESLF++N IQF   ++         ++SH+ D                 
Sbjct: 307 LSKECKSGNSCESLFSDNKIQFHKDDEYSLVQNNAFSISHMPDTDDEDLVGSSHKRRKKN 366

Query: 247 XXXXXXXXRTEDEYLNCSSDEDIATEYNHSISSSASQ-GKWLLSTDNFALTWNMADLAEH 71
                     +++ L    DE +  E ++  +S  SQ G W LSTD F+ +W++AD+ +H
Sbjct: 367 RRRKRRRYEFDEDKL----DELLELESSNVKNSVESQRGSWHLSTDGFSASWDIADIPDH 422

Query: 70  LALYSLRKWLNYAI*RCYR 14
           L+ Y    W+ +A   C+R
Sbjct: 423 LSTYYFTTWVKWA---CFR 438


>ref|XP_004970895.1| PREDICTED: uncharacterized protein LOC101764908 isoform X1 [Setaria
           italica]
          Length = 512

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
 Frame = -3

Query: 400 LSKMCNSVDYCESLFTENGIQFRNCEK---------ALSHIDDLPXXXXXXXXXXXXXXX 248
           LSK C S + CESLF++N IQF   ++         ++SH+ D                 
Sbjct: 381 LSKECKSGNSCESLFSDNKIQFHKDDEYSLVQNNAFSISHMPDTDDEDLVGSSHKRRKKN 440

Query: 247 XXXXXXXXRTEDEYLNCSSDEDIATEYNHSISSSASQ-GKWLLSTDNFALTWNMADLAEH 71
                     +++ L    DE +  E ++  +S  SQ G W LSTD F+ +W++AD+ +H
Sbjct: 441 RRRKRRRYEFDEDKL----DELLELESSNVKNSVESQRGSWHLSTDGFSASWDIADIPDH 496

Query: 70  LALYSLRKWLNYAI*RCYR 14
           L+ Y    W+ +A   C+R
Sbjct: 497 LSTYYFTTWVKWA---CFR 512


>gb|ACN34040.1| unknown [Zea mays] gi|414879228|tpg|DAA56359.1| TPA: hypothetical
           protein ZEAMMB73_885360 [Zea mays]
          Length = 511

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
 Frame = -3

Query: 403 QLSKMCNSVDYCESLFTENGIQF---------RNCEKALSHIDDLPXXXXXXXXXXXXXX 251
           +LSK C S D CES F+ N I+F         RN   ++SH+ D+               
Sbjct: 380 ELSKECKSGDSCESFFSHNKIEFHKADDYSLVRNYGFSISHMPDIDVEDLTRSSHKRRKR 439

Query: 250 XXXXXXXXXRTEDEYLNCSSDEDIATEYNHSISSSASQ-GKWLLSTDNFALTWNMADLAE 74
                      ED++     DE +    +   +   SQ G W LSTD F+ +W+++D+ +
Sbjct: 440 NRRKRHRYESDEDKF-----DELLELGSSDGKNGVESQRGSWRLSTDGFSASWDISDIPD 494

Query: 73  HLALYSLRKWLNYAI*RCYR 14
           HL+      W+ +A   C+R
Sbjct: 495 HLSTCYFTIWVKWA---CFR 511


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