BLASTX nr result
ID: Ephedra25_contig00016250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00016250
(724 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup9... 72 2e-10
ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup9... 72 2e-10
ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citr... 71 4e-10
ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citr... 71 4e-10
ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495522.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495521.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495520.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495518.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004495516.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup9... 66 1e-08
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ... 66 1e-08
dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana b... 65 2e-08
ref|XP_006306623.1| hypothetical protein CARUB_v10008140mg [Caps... 65 2e-08
ref|NP_172510.2| nucleoporin autopeptidase [Arabidopsis thaliana... 65 2e-08
gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana] 65 2e-08
ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citr... 65 2e-08
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9... 65 3e-08
>ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Citrus sinensis]
Length = 998
Score = 71.6 bits (174), Expect = 2e-10
Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRY-PTT-AEQVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQ+ SR+ Y PTT AE + KL SIS MP YK K HEEL WEDYQ GDK
Sbjct: 318 STFGGQRGGSRIATYAPTTEAETGSASQPAGKLESISAMPVYKDKSHEELRWEDYQLGDK 377
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPAF-RNSRSCFSFNGMS 392
G PL S FG PS+ + +PAF ++S S FS + MS
Sbjct: 378 GGPL--PAGQSAGGIGFGASAAPSSPFAPSPAFGQSSASPFSSSTMS 422
>ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Citrus sinensis] gi|568844741|ref|XP_006476242.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Citrus sinensis]
Length = 1009
Score = 71.6 bits (174), Expect = 2e-10
Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRY-PTT-AEQVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQ+ SR+ Y PTT AE + KL SIS MP YK K HEEL WEDYQ GDK
Sbjct: 318 STFGGQRGGSRIATYAPTTEAETGSASQPAGKLESISAMPVYKDKSHEELRWEDYQLGDK 377
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPAF-RNSRSCFSFNGMS 392
G PL S FG PS+ + +PAF ++S S FS + MS
Sbjct: 378 GGPL--PAGQSAGGIGFGASAAPSSPFAPSPAFGQSSASPFSSSTMS 422
>ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
gi|557541433|gb|ESR52411.1| hypothetical protein
CICLE_v10018664mg [Citrus clementina]
Length = 1006
Score = 70.9 bits (172), Expect = 4e-10
Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRY-PTT-AEQVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQ+ SR+ Y PTT AE + KL SIS MP YK K HEEL WEDYQ GDK
Sbjct: 326 STFGGQRGGSRIAAYAPTTEAETGSASQPAGKLESISSMPVYKDKSHEELRWEDYQLGDK 385
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPAF-RNSRSCFSFNGMS 392
G PL S FG PS+ + +PAF ++S S FS + MS
Sbjct: 386 GGPL--PAGQSAGGIGFGASAAPSSPFAPSPAFGQSSASPFSSSTMS 430
>ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
gi|557541432|gb|ESR52410.1| hypothetical protein
CICLE_v10018664mg [Citrus clementina]
Length = 1017
Score = 70.9 bits (172), Expect = 4e-10
Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRY-PTT-AEQVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQ+ SR+ Y PTT AE + KL SIS MP YK K HEEL WEDYQ GDK
Sbjct: 326 STFGGQRGGSRIAAYAPTTEAETGSASQPAGKLESISSMPVYKDKSHEELRWEDYQLGDK 385
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPAF-RNSRSCFSFNGMS 392
G PL S FG PS+ + +PAF ++S S FS + MS
Sbjct: 386 GGPL--PAGQSAGGIGFGASAAPSSPFAPSPAFGQSSASPFSSSTMS 430
>ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X8
[Cicer arietinum]
Length = 987
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 316 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 375
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 376 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 406
>ref|XP_004495522.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X7
[Cicer arietinum]
Length = 993
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 304 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 363
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 364 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 394
>ref|XP_004495521.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X6
[Cicer arietinum]
Length = 995
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 306 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 365
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 366 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 396
>ref|XP_004495520.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X5
[Cicer arietinum]
Length = 1005
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 337 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 396
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 397 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 427
>ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X4
[Cicer arietinum]
Length = 1022
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 333 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 392
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 393 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 423
>ref|XP_004495518.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Cicer arietinum]
Length = 1023
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 334 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 393
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 394 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 424
>ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
[Cicer arietinum]
Length = 1025
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 336 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 395
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 396 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 426
>ref|XP_004495516.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Cicer arietinum]
Length = 1026
Score = 66.2 bits (160), Expect = 1e-08
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+ FGGQ+ SRV Y T E KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 337 SGFGGQRGGSRVASYSATPEADSGTSGQTAKLESISAMPVYKEKSHEELRWEDYQLGDKG 396
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNS 422
PL + G+ ++ST+ T AF S
Sbjct: 397 GPLASAPQPTGFNSNAGF----NSSTTQTNAFSPS 427
>ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like, partial
[Cucumis sativus]
Length = 436
Score = 66.2 bits (160), Expect = 1e-08
Identities = 38/71 (53%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -1
Query: 721 TSSSRATAFGGQQSSSRVIRYPTTAEQVP---VRKTR*KLASISVMP*YKKKYHEELIWE 551
TS FGGQ+ SRV Y T E P + KL SIS MP YK K HEEL WE
Sbjct: 122 TSGFGQAGFGGQRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWE 181
Query: 550 DYQAGDKGRPL 518
DYQ GDKG PL
Sbjct: 182 DYQLGDKGGPL 192
>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
Length = 994
Score = 66.2 bits (160), Expect = 1e-08
Identities = 38/71 (53%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -1
Query: 721 TSSSRATAFGGQQSSSRVIRYPTTAEQVP---VRKTR*KLASISVMP*YKKKYHEELIWE 551
TS FGGQ+ SRV Y T E P + KL SIS MP YK K HEEL WE
Sbjct: 314 TSGFGQAGFGGQRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWE 373
Query: 550 DYQAGDKGRPL 518
DYQ GDKG PL
Sbjct: 374 DYQLGDKGGPL 384
>dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana benthamiana]
Length = 1023
Score = 65.5 bits (158), Expect = 2e-08
Identities = 46/101 (45%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAEQVPVRKTR*--KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+A GGQ+ +RV Y T E T+ KL SIS MP Y+ K HEEL WEDYQ GDK
Sbjct: 304 SAVGGQRGGTRVAAYQATPEADSGSGTQPAGKLESISAMPVYRDKSHEELRWEDYQLGDK 363
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPAFRNSRSCFS 407
G P S S FG F S+STS P ++S + FS
Sbjct: 364 GGP--ASVGQSTSGINFGSSAFASSSTS--PFGQSSSNPFS 400
>ref|XP_006306623.1| hypothetical protein CARUB_v10008140mg [Capsella rubella]
gi|482575334|gb|EOA39521.1| hypothetical protein
CARUB_v10008140mg [Capsella rubella]
Length = 1123
Score = 65.5 bits (158), Expect = 2e-08
Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = -1
Query: 697 FGGQQSSSRVIRYPTTAEQVPVRKTR*--KLASISVMP*YKKKYHEELIWEDYQAGDKGR 524
FGGQQ SR + Y T E T+ KL SIS MP YK K HEEL WEDYQ GDKG
Sbjct: 423 FGGQQGGSRAVPYSPTVEAETGSGTQPAGKLESISAMPAYKDKNHEELRWEDYQRGDKGG 482
Query: 523 PL 518
PL
Sbjct: 483 PL 484
>ref|NP_172510.2| nucleoporin autopeptidase [Arabidopsis thaliana]
gi|79317517|ref|NP_001031018.1| nucleoporin
autopeptidase [Arabidopsis thaliana]
gi|19310423|gb|AAL84948.1| At1g10390/F14N23_29
[Arabidopsis thaliana] gi|27764948|gb|AAO23595.1|
At1g10390/F14N23_29 [Arabidopsis thaliana]
gi|110742211|dbj|BAE99032.1| hypothetical protein
[Arabidopsis thaliana] gi|332190453|gb|AEE28574.1|
nucleoporin autopeptidase [Arabidopsis thaliana]
gi|332190454|gb|AEE28575.1| nucleoporin autopeptidase
[Arabidopsis thaliana]
Length = 1041
Score = 65.5 bits (158), Expect = 2e-08
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAEQVPVRKTR*--KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQQ SR + Y T E T+ KL SIS MP YK+K +EEL WEDYQ GDK
Sbjct: 337 STFGGQQGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDK 396
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPA 434
G PL S G+ + PS ++P+
Sbjct: 397 GGPLPA----GQSPGNAGFGISPSQPNPFSPS 424
>gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana]
Length = 1096
Score = 65.5 bits (158), Expect = 2e-08
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAEQVPVRKTR*--KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQQ SR + Y T E T+ KL SIS MP YK+K +EEL WEDYQ GDK
Sbjct: 391 STFGGQQGGSRAVPYAPTVEADTGTGTQPAGKLESISAMPAYKEKNYEELRWEDYQRGDK 450
Query: 529 GRPLFGCTLDSHSKPTFGYIVFPSASTSWTPA 434
G PL S G+ + PS ++P+
Sbjct: 451 GGPLPA----GQSPGNAGFGISPSQPNPFSPS 478
>ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citrus clementina]
gi|557534778|gb|ESR45896.1| hypothetical protein
CICLE_v10000333mg [Citrus clementina]
Length = 793
Score = 65.1 bits (157), Expect = 2e-08
Identities = 46/107 (42%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRY-PTT-AEQVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDK 530
+ FGGQ+ SR+ + PTT AE + KL SIS MP YK K HEEL WEDYQ GDK
Sbjct: 595 STFGGQRGGSRIAAFAPTTEAETGSASQPAGKLDSISAMPAYKDKSHEELRWEDYQLGDK 654
Query: 529 GRPL-----FGCTLDSHSKPTFGYIVFPSASTSWTPAFRNSRSCFSF 404
G P FG + S T + P ST + +F S S +F
Sbjct: 655 GGPFPPPPSFGQSSASPFSST-SNLFAPKTSTFTSSSFGTSTSTSAF 700
>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Solanum tuberosum]
Length = 993
Score = 64.7 bits (156), Expect = 3e-08
Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -1
Query: 703 TAFGGQQSSSRVIRYPTTAE-QVPVRKTR*KLASISVMP*YKKKYHEELIWEDYQAGDKG 527
+A GGQ+ +RV Y T + P KL SIS MP YK+K HEEL WEDYQ GDKG
Sbjct: 289 SAVGGQRGGTRVAAYQATPDADNPSGTQPAKLESISAMPVYKEKSHEELRWEDYQLGDKG 348
Query: 526 RPLFGCTLDSHSKPTFGYIVFPSASTS 446
P S S FG F S++TS
Sbjct: 349 GP--APAGQSTSGMNFGSSAFASSTTS 373
Score = 35.0 bits (79), Expect(3) = 9e-06
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3
Query: 290 LVSTSGMPEYMRKSHVVLRYEDFQAGD 210
L S S MP Y KSH LR+ED+Q GD
Sbjct: 320 LESISAMPVYKEKSHEELRWEDYQLGD 346
Score = 31.6 bits (70), Expect(3) = 9e-06
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -2
Query: 372 GQLGGSRVVPYTATTGQDIPMGQLPGKL 289
GQ GG+RV Y AT D P G P KL
Sbjct: 293 GQRGGTRVAAYQATPDADNPSGTQPAKL 320
Score = 28.5 bits (62), Expect(3) = 9e-06
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = -1
Query: 529 GRPLFGCT----LDSHSKPTFGYIVFPSASTSWTPAFRNSRSCF 410
G P FG T S S P FG PS S +PAF S S F
Sbjct: 210 GTPSFGTTTASAFGSTSTPAFGTPSAPSFSFGSSPAFGQSTSAF 253