BLASTX nr result
ID: Ephedra25_contig00015481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015481
(1260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 94 9e-17
emb|CBI17535.3| unnamed protein product [Vitis vinifera] 94 9e-17
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei... 94 9e-17
ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotei... 92 6e-16
ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotei... 92 6e-16
ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A... 92 6e-16
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p... 92 6e-16
ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotei... 91 8e-16
gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobr... 91 1e-15
gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus pe... 91 1e-15
ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotei... 90 2e-15
ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotei... 90 2e-15
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr... 90 2e-15
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr... 90 2e-15
ref|XP_006383217.1| hypothetical protein POPTR_0005s12580g [Popu... 88 7e-15
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu... 87 1e-14
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M... 87 1e-14
ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutr... 87 1e-14
ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabido... 87 1e-14
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense] 87 1e-14
>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 94.4 bits (233), Expect = 9e-17
Identities = 46/70 (65%), Positives = 49/70 (70%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDPN DPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100 ERRARIHKIRLEEGAKKAAEELEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFE 159
Query: 973 VYGPIKRVGI 1002
YG IKRVGI
Sbjct: 160 AYGAIKRVGI 169
>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 94.4 bits (233), Expect = 9e-17
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
A+RRA+IH+ YDPN DPNI GDPYKTLFVARLNYETTE +IKREF
Sbjct: 99 AQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREF 158
Query: 970 EVYGPIKRVGIFRE 1011
E YGPIKRV + +
Sbjct: 159 EAYGPIKRVRLITD 172
>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 94.4 bits (233), Expect = 9e-17
Identities = 45/74 (60%), Positives = 51/74 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
A+RRA+IH+ YDPN DPNI GDPYKTLFVARLNYETTE +IKREF
Sbjct: 99 AQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREF 158
Query: 970 EVYGPIKRVGIFRE 1011
E YGPIKRV + +
Sbjct: 159 EAYGPIKRVRLITD 172
>ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X2 [Solanum tuberosum]
Length = 474
Score = 91.7 bits (226), Expect = 6e-16
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN+ GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 99 ERRARIHKLRLEEGAKKAAEELEKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFE 158
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 159 AYGPIKRV 166
>ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
X1 [Solanum tuberosum]
Length = 475
Score = 91.7 bits (226), Expect = 6e-16
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN+ GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 99 ERRARIHKLRLEEGAKKAAEELEKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFE 158
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 159 AYGPIKRV 166
>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
gi|548859890|gb|ERN17498.1| hypothetical protein
AMTR_s00059p00067090 [Amborella trichopoda]
Length = 458
Score = 91.7 bits (226), Expect = 6e-16
Identities = 44/73 (60%), Positives = 49/73 (67%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
+RRA+IH YDP KDPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100 QRRARIHGLRLEKGAAKAAEELQKYDPTKDPNISGDPYKTLFVARLNYETTEHRIKREFE 159
Query: 973 VYGPIKRVGIFRE 1011
YGPIKRV + +
Sbjct: 160 AYGPIKRVRLIHD 172
>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
ribonucleoprotein 70 kDa, putative [Ricinus communis]
Length = 506
Score = 91.7 bits (226), Expect = 6e-16
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
+RRA+IH+ YDPN DPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100 QRRARIHQLRLEKGAEKAAEELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFE 159
Query: 973 VYGPIKRVGIFRE 1011
YGPIKRV + +
Sbjct: 160 SYGPIKRVRLITD 172
>ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Fragaria
vesca subsp. vesca]
Length = 509
Score = 91.3 bits (225), Expect = 8e-16
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
A+RRA+IH+ YDPN DPNI GDPYKTLF+ARLNYETTE K++REF
Sbjct: 98 AQRRARIHQLRLEKGAAKAAEELEKYDPNSDPNISGDPYKTLFIARLNYETTESKLRREF 157
Query: 970 EVYGPIKRV 996
+ YGPIKRV
Sbjct: 158 DAYGPIKRV 166
>gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobroma cacao]
Length = 468
Score = 90.9 bits (224), Expect = 1e-15
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
A+RRA+IH+ YDPN DPNI GDPYKTLFVARLNYET+E ++KREF
Sbjct: 100 AQRRARIHKLRLEKGVEKAAEELKNYDPNNDPNISGDPYKTLFVARLNYETSESRMKREF 159
Query: 970 EVYGPIKRVGIFRE 1011
E YGPIKRV + +
Sbjct: 160 ESYGPIKRVRLITD 173
>gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
Length = 517
Score = 90.5 bits (223), Expect = 1e-15
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
+RRA+IH+ YDPN DPNI GDPYKTLF+ARLNYE+TE +IKREF+
Sbjct: 106 QRRARIHQLRLDKGAAKAAEELEKYDPNNDPNISGDPYKTLFIARLNYESTESRIKREFD 165
Query: 973 VYGPIKRV 996
VYGPIKRV
Sbjct: 166 VYGPIKRV 173
>ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Solanum lycopersicum]
Length = 390
Score = 90.1 bits (222), Expect = 2e-15
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 13 ERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFE 72
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 73 AYGPIKRV 80
>ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Solanum lycopersicum]
Length = 482
Score = 90.1 bits (222), Expect = 2e-15
Identities = 42/68 (61%), Positives = 47/68 (69%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 105 ERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFE 164
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 165 AYGPIKRV 172
>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
gi|557527686|gb|ESR38936.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
Length = 480
Score = 89.7 bits (221), Expect = 2e-15
Identities = 43/68 (63%), Positives = 48/68 (70%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN+ GDPYKTLFVARL+YETTE KIKREFE
Sbjct: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 160 SYGPIKRV 167
>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
gi|557527685|gb|ESR38935.1| hypothetical protein
CICLE_v10025502mg [Citrus clementina]
Length = 478
Score = 89.7 bits (221), Expect = 2e-15
Identities = 43/68 (63%), Positives = 48/68 (70%)
Frame = +1
Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
ERRA+IH+ YDP+ DPN+ GDPYKTLFVARL+YETTE KIKREFE
Sbjct: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
Query: 973 VYGPIKRV 996
YGPIKRV
Sbjct: 160 SYGPIKRV 167
>ref|XP_006383217.1| hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
gi|550338799|gb|ERP61014.1| hypothetical protein
POPTR_0005s12580g [Populus trichocarpa]
Length = 422
Score = 88.2 bits (217), Expect = 7e-15
Identities = 53/121 (43%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Frame = +1
Query: 652 MILGASITLHCVNQLTSFLIHSMISDINTKIQNSVIFALFFLLI------CQAERRAKIH 813
M+ SI + V L SFL S F L+F+ + Q++R+A+IH
Sbjct: 1 MVHARSIIVSYVLCLVSFLFLSS-------------FVLYFITLRVHFHGLQSQRKARIH 47
Query: 814 RXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFEVYGPIKR 993
YDPN DP + GDPYKTLFVARLNYETTE KIKRE E YGPIK+
Sbjct: 48 MARLEKGAEKAAEELQKYDPNNDPKVSGDPYKTLFVARLNYETTESKIKRELESYGPIKQ 107
Query: 994 V 996
V
Sbjct: 108 V 108
>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
gi|550334743|gb|EEE90671.2| hypothetical protein
POPTR_0007s12690g [Populus trichocarpa]
Length = 497
Score = 87.4 bits (215), Expect = 1e-14
Identities = 42/69 (60%), Positives = 47/69 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
AER+A+IH YDP DPN+ GDPYKTLFVARL+YETTE +IKREF
Sbjct: 99 AERKARIHAARLEKGAEKAAEELQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREF 158
Query: 970 EVYGPIKRV 996
E YGPIKRV
Sbjct: 159 ESYGPIKRV 167
>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear
ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 87.4 bits (215), Expect = 1e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
AERRA++H+ YDP+ DPNI GDPYKTLFVARL+YETTE +IKREF
Sbjct: 96 AERRARVHKLRLEKGAAKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREF 155
Query: 970 EVYGPIKRVGIFREL----PRRHKF 1032
E YG IKRV + + PR + F
Sbjct: 156 ESYGAIKRVRLVTDAESNKPRGYAF 180
>ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutrema salsugineum]
gi|557090508|gb|ESQ31155.1| hypothetical protein
EUTSA_v10004249mg [Eutrema salsugineum]
Length = 434
Score = 87.0 bits (214), Expect = 1e-14
Identities = 41/69 (59%), Positives = 47/69 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
A++R +IH+ YDPN DPN GDPYKTLFVARLNYET+E KIKREF
Sbjct: 99 AQKRERIHKSRLEKGVEKAAEELKKYDPNSDPNASGDPYKTLFVARLNYETSESKIKREF 158
Query: 970 EVYGPIKRV 996
E YGPIK+V
Sbjct: 159 EAYGPIKQV 167
>ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|1354466|gb|AAD12776.1| U1 snRNP 70K truncated protein
[Arabidopsis thaliana] gi|1354468|gb|AAD12774.1| U1
snRNP 70K truncated protein [Arabidopsis thaliana]
gi|332645172|gb|AEE78693.1| U1 small nuclear
ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 204
Score = 87.0 bits (214), Expect = 1e-14
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
+++R +IH+ YDPN DPN GDPYKTLFV+RLNYE++E KIKREF
Sbjct: 99 SQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREF 158
Query: 970 EVYGPIKRVG 999
E YGPIKRVG
Sbjct: 159 ESYGPIKRVG 168
>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 87.0 bits (214), Expect = 1e-14
Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +1
Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
AERRA++H+ YDP+ DPNI GDPYKTLFVARL+YETTE +IKREF
Sbjct: 100 AERRARVHKLRLEKGAAKAAEELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKREF 159
Query: 970 EVYGPIKRVGIFREL----PRRHKF 1032
E YG IKRV + + PR + F
Sbjct: 160 ESYGAIKRVRLVTDTESNKPRGYAF 184