BLASTX nr result

ID: Ephedra25_contig00015481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00015481
         (1260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]       94   9e-17
emb|CBI17535.3| unnamed protein product [Vitis vinifera]               94   9e-17
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...    94   9e-17
ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotei...    92   6e-16
ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotei...    92   6e-16
ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [A...    92   6e-16
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...    92   6e-16
ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotei...    91   8e-16
gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobr...    91   1e-15
gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus pe...    91   1e-15
ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotei...    90   2e-15
ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotei...    90   2e-15
ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citr...    90   2e-15
ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citr...    90   2e-15
ref|XP_006383217.1| hypothetical protein POPTR_0005s12580g [Popu...    88   7e-15
ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Popu...    87   1e-14
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M...    87   1e-14
ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutr...    87   1e-14
ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabido...    87   1e-14
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]     87   1e-14

>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 46/70 (65%), Positives = 49/70 (70%)
 Frame = +1

Query: 793  ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
            ERRA+IH+                YDPN DPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100  ERRARIHKIRLEEGAKKAAEELEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFE 159

Query: 973  VYGPIKRVGI 1002
             YG IKRVGI
Sbjct: 160  AYGAIKRVGI 169


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 45/74 (60%), Positives = 51/74 (68%)
 Frame = +1

Query: 790  AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
            A+RRA+IH+                YDPN DPNI GDPYKTLFVARLNYETTE +IKREF
Sbjct: 99   AQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREF 158

Query: 970  EVYGPIKRVGIFRE 1011
            E YGPIKRV +  +
Sbjct: 159  EAYGPIKRVRLITD 172


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
            vinifera]
          Length = 514

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 45/74 (60%), Positives = 51/74 (68%)
 Frame = +1

Query: 790  AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
            A+RRA+IH+                YDPN DPNI GDPYKTLFVARLNYETTE +IKREF
Sbjct: 99   AQRRARIHKLRLEKGAEKATEEFQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREF 158

Query: 970  EVYGPIKRVGIFRE 1011
            E YGPIKRV +  +
Sbjct: 159  EAYGPIKRVRLITD 172


>ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Solanum tuberosum]
          Length = 474

 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 42/68 (61%), Positives = 48/68 (70%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN+ GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 99  ERRARIHKLRLEEGAKKAAEELEKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFE 158

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 159 AYGPIKRV 166


>ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Solanum tuberosum]
          Length = 475

 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 42/68 (61%), Positives = 48/68 (70%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN+ GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 99  ERRARIHKLRLEEGAKKAAEELEKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFE 158

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 159 AYGPIKRV 166


>ref|XP_006856031.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda]
            gi|548859890|gb|ERN17498.1| hypothetical protein
            AMTR_s00059p00067090 [Amborella trichopoda]
          Length = 458

 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 44/73 (60%), Positives = 49/73 (67%)
 Frame = +1

Query: 793  ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
            +RRA+IH                 YDP KDPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100  QRRARIHGLRLEKGAAKAAEELQKYDPTKDPNISGDPYKTLFVARLNYETTEHRIKREFE 159

Query: 973  VYGPIKRVGIFRE 1011
             YGPIKRV +  +
Sbjct: 160  AYGPIKRVRLIHD 172


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
            communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
            ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score = 91.7 bits (226), Expect = 6e-16
 Identities = 44/73 (60%), Positives = 50/73 (68%)
 Frame = +1

Query: 793  ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
            +RRA+IH+                YDPN DPNI GDPYKTLFVARLNYETTE +IKREFE
Sbjct: 100  QRRARIHQLRLEKGAEKAAEELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFE 159

Query: 973  VYGPIKRVGIFRE 1011
             YGPIKRV +  +
Sbjct: 160  SYGPIKRVRLITD 172


>ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Fragaria
           vesca subsp. vesca]
          Length = 509

 Score = 91.3 bits (225), Expect = 8e-16
 Identities = 42/69 (60%), Positives = 49/69 (71%)
 Frame = +1

Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
           A+RRA+IH+                YDPN DPNI GDPYKTLF+ARLNYETTE K++REF
Sbjct: 98  AQRRARIHQLRLEKGAAKAAEELEKYDPNSDPNISGDPYKTLFIARLNYETTESKLRREF 157

Query: 970 EVYGPIKRV 996
           + YGPIKRV
Sbjct: 158 DAYGPIKRV 166


>gb|EOX91126.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobroma cacao]
          Length = 468

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 43/74 (58%), Positives = 51/74 (68%)
 Frame = +1

Query: 790  AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
            A+RRA+IH+                YDPN DPNI GDPYKTLFVARLNYET+E ++KREF
Sbjct: 100  AQRRARIHKLRLEKGVEKAAEELKNYDPNNDPNISGDPYKTLFVARLNYETSESRMKREF 159

Query: 970  EVYGPIKRVGIFRE 1011
            E YGPIKRV +  +
Sbjct: 160  ESYGPIKRVRLITD 173


>gb|EMJ05526.1| hypothetical protein PRUPE_ppa004309mg [Prunus persica]
          Length = 517

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 42/68 (61%), Positives = 49/68 (72%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           +RRA+IH+                YDPN DPNI GDPYKTLF+ARLNYE+TE +IKREF+
Sbjct: 106 QRRARIHQLRLDKGAAKAAEELEKYDPNNDPNISGDPYKTLFIARLNYESTESRIKREFD 165

Query: 973 VYGPIKRV 996
           VYGPIKRV
Sbjct: 166 VYGPIKRV 173


>ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Solanum lycopersicum]
          Length = 390

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 42/68 (61%), Positives = 47/68 (69%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN  GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 13  ERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFE 72

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 73  AYGPIKRV 80


>ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Solanum lycopersicum]
          Length = 482

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 42/68 (61%), Positives = 47/68 (69%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN  GDPYKTLFVARLNYETTE ++KREFE
Sbjct: 105 ERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFE 164

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 165 AYGPIKRV 172


>ref|XP_006425696.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|568824794|ref|XP_006466779.1| PREDICTED: U1 small
           nuclear ribonucleoprotein 70 kDa-like [Citrus sinensis]
           gi|557527686|gb|ESR38936.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 480

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 43/68 (63%), Positives = 48/68 (70%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN+ GDPYKTLFVARL+YETTE KIKREFE
Sbjct: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 160 SYGPIKRV 167


>ref|XP_006425695.1| hypothetical protein CICLE_v10025502mg [Citrus clementina]
           gi|557527685|gb|ESR38935.1| hypothetical protein
           CICLE_v10025502mg [Citrus clementina]
          Length = 478

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 43/68 (63%), Positives = 48/68 (70%)
 Frame = +1

Query: 793 ERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFE 972
           ERRA+IH+                YDP+ DPN+ GDPYKTLFVARL+YETTE KIKREFE
Sbjct: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159

Query: 973 VYGPIKRV 996
            YGPIKRV
Sbjct: 160 SYGPIKRV 167


>ref|XP_006383217.1| hypothetical protein POPTR_0005s12580g [Populus trichocarpa]
           gi|550338799|gb|ERP61014.1| hypothetical protein
           POPTR_0005s12580g [Populus trichocarpa]
          Length = 422

 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 53/121 (43%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
 Frame = +1

Query: 652 MILGASITLHCVNQLTSFLIHSMISDINTKIQNSVIFALFFLLI------CQAERRAKIH 813
           M+   SI +  V  L SFL  S              F L+F+ +       Q++R+A+IH
Sbjct: 1   MVHARSIIVSYVLCLVSFLFLSS-------------FVLYFITLRVHFHGLQSQRKARIH 47

Query: 814 RXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREFEVYGPIKR 993
                            YDPN DP + GDPYKTLFVARLNYETTE KIKRE E YGPIK+
Sbjct: 48  MARLEKGAEKAAEELQKYDPNNDPKVSGDPYKTLFVARLNYETTESKIKRELESYGPIKQ 107

Query: 994 V 996
           V
Sbjct: 108 V 108


>ref|XP_002310221.2| hypothetical protein POPTR_0007s12690g [Populus trichocarpa]
           gi|550334743|gb|EEE90671.2| hypothetical protein
           POPTR_0007s12690g [Populus trichocarpa]
          Length = 497

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = +1

Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
           AER+A+IH                 YDP  DPN+ GDPYKTLFVARL+YETTE +IKREF
Sbjct: 99  AERKARIHAARLEKGAEKAAEELQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREF 158

Query: 970 EVYGPIKRV 996
           E YGPIKRV
Sbjct: 159 ESYGPIKRV 167


>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
            gi|355523491|gb|AET03945.1| U1 small nuclear
            ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 502

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = +1

Query: 790  AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
            AERRA++H+                YDP+ DPNI GDPYKTLFVARL+YETTE +IKREF
Sbjct: 96   AERRARVHKLRLEKGAAKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREF 155

Query: 970  EVYGPIKRVGIFREL----PRRHKF 1032
            E YG IKRV +  +     PR + F
Sbjct: 156  ESYGAIKRVRLVTDAESNKPRGYAF 180


>ref|XP_006393869.1| hypothetical protein EUTSA_v10004249mg [Eutrema salsugineum]
           gi|557090508|gb|ESQ31155.1| hypothetical protein
           EUTSA_v10004249mg [Eutrema salsugineum]
          Length = 434

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 41/69 (59%), Positives = 47/69 (68%)
 Frame = +1

Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
           A++R +IH+                YDPN DPN  GDPYKTLFVARLNYET+E KIKREF
Sbjct: 99  AQKRERIHKSRLEKGVEKAAEELKKYDPNSDPNASGDPYKTLFVARLNYETSESKIKREF 158

Query: 970 EVYGPIKRV 996
           E YGPIK+V
Sbjct: 159 EAYGPIKQV 167


>ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
           gi|1354466|gb|AAD12776.1| U1 snRNP 70K truncated protein
           [Arabidopsis thaliana] gi|1354468|gb|AAD12774.1| U1
           snRNP 70K truncated protein [Arabidopsis thaliana]
           gi|332645172|gb|AEE78693.1| U1 small nuclear
           ribonucleoprotein-70K [Arabidopsis thaliana]
          Length = 204

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 40/70 (57%), Positives = 48/70 (68%)
 Frame = +1

Query: 790 AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
           +++R +IH+                YDPN DPN  GDPYKTLFV+RLNYE++E KIKREF
Sbjct: 99  SQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREF 158

Query: 970 EVYGPIKRVG 999
           E YGPIKRVG
Sbjct: 159 ESYGPIKRVG 168


>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 45/85 (52%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = +1

Query: 790  AERRAKIHRXXXXXXXXXXXXXXXXYDPNKDPNIVGDPYKTLFVARLNYETTERKIKREF 969
            AERRA++H+                YDP+ DPNI GDPYKTLFVARL+YETTE +IKREF
Sbjct: 100  AERRARVHKLRLEKGAAKAAEELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKREF 159

Query: 970  EVYGPIKRVGIFREL----PRRHKF 1032
            E YG IKRV +  +     PR + F
Sbjct: 160  ESYGAIKRVRLVTDTESNKPRGYAF 184


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