BLASTX nr result

ID: Ephedra25_contig00015326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00015326
         (557 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25066.1| unknown [Picea sitchensis]                              63   4e-08
gb|ACN39941.1| unknown [Picea sitchensis]                              58   1e-06

>gb|ABK25066.1| unknown [Picea sitchensis]
          Length = 321

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
 Frame = -3

Query: 534 DREKERKSFRSLGQFVIDVPRRIESFSSRTYSPRGIFGGDDQQSCSPA---KSPSTRFRS 364
           D+     S ++L + +I++PRR++SFSS    PR +   DDQQ+ SP+   KSPSTR RS
Sbjct: 234 DQGMTSTSRKTLDKIIIEIPRRVDSFSS----PR-LLSSDDQQAFSPSQSLKSPSTRLRS 288

Query: 363 FKRLMSRDKG-LPQSP 319
            KRL+SRDK  +PQSP
Sbjct: 289 LKRLLSRDKRVVPQSP 304


>gb|ACN39941.1| unknown [Picea sitchensis]
          Length = 318

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 47/103 (45%), Positives = 58/103 (56%), Gaps = 16/103 (15%)
 Frame = -3

Query: 555 SSASGCVDREKERKSF--RSLGQFVIDVPRRIESFSSRTYSPRGIFGGDDQQSCSPA--- 391
           SS S  V  EK   S   ++L + +ID+P+R  SFSS    PR +F  DDQQ  SP+   
Sbjct: 220 SSMSNSVFFEKGATSTSRKTLDKIIIDIPQRANSFSS----PR-LFCSDDQQVFSPSGQS 274

Query: 390 -KSPSTRFRSFKRLMSRDKG-LPQSP---------QGSSSNSR 295
            KSPS R RS KRL+S+DK  +P SP         QG SS SR
Sbjct: 275 LKSPSMRLRSLKRLLSKDKKVVPPSPDDRRNLHIEQGDSSQSR 317


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