BLASTX nr result
ID: Ephedra25_contig00015186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015186
(604 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 108 1e-33
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 108 2e-33
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 106 4e-33
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 105 6e-33
ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665... 111 3e-32
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi... 114 7e-32
emb|CBI37296.3| unnamed protein product [Vitis vinifera] 101 7e-31
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 111 8e-31
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 99 9e-31
emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera] 104 1e-30
pir||E84492 probable retroelement pol polyprotein [imported] - A... 93 2e-30
gb|AAZ66952.1| 117M18_33 [Brassica rapa] 103 3e-30
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi... 105 7e-30
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao] 102 1e-29
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 102 1e-29
emb|CAB75932.1| putative protein [Arabidopsis thaliana] 106 3e-29
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran... 96 3e-29
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran... 97 6e-29
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi... 105 6e-29
gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao] 102 8e-29
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 108 bits (269), Expect(3) = 1e-33
Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = -2
Query: 435 STSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 259
S + C CI K +KPF K R+ S CLE+IH+DLCGP+ ++ RY L+F+DD+S
Sbjct: 469 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHS 528
Query: 258 KMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
+M+W + ++ K+E FE F F+ V+ + I LRTD G EF SN+FK F
Sbjct: 529 RMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVF 580
Score = 54.7 bits (130), Expect(3) = 1e-33
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
VF E++G+ REL PY+P+QNGVAERKNRT++EM
Sbjct: 579 VFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEM 612
Score = 27.3 bits (59), Expect(3) = 1e-33
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 586 NGLFAIKPLKIECY---LTNTEISNLWHNRLGHIS 491
N LF ++ IE + + T SNLWH R GH++
Sbjct: 414 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLN 448
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 108 bits (269), Expect(3) = 2e-33
Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = -2
Query: 435 STSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 259
S + C CI K +KPF K R+ S CLE+IH+DLCGP+ ++ RY L+F+DD+S
Sbjct: 454 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHS 513
Query: 258 KMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
+M+W + ++ K+E FE F F+ V+ + I LRTD G EF SN+FK F
Sbjct: 514 RMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVF 565
Score = 53.9 bits (128), Expect(3) = 2e-33
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
VF E++G+ REL PY+P QNGVAERKNRT++EM
Sbjct: 564 VFXEEEGLHRELTTPYSPXQNGVAERKNRTVVEM 597
Score = 27.3 bits (59), Expect(3) = 2e-33
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 586 NGLFAIKPLKIECY---LTNTEISNLWHNRLGHIS 491
N LF ++ IE + + T SNLWH R GH++
Sbjct: 399 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLN 433
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 106 bits (264), Expect(3) = 4e-33
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = -2
Query: 435 STSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 259
S + C CI K +KPF K R+ S CLE+IH+DLCGP+ ++ RY L+F++D+S
Sbjct: 403 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHS 462
Query: 258 KMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
+M+W + ++ K+E FE F F+ V+ + I LRTD G EF SN+FK F
Sbjct: 463 RMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVF 514
Score = 54.7 bits (130), Expect(3) = 4e-33
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
VF E++G+ REL PY+P+QNGVAERKNRT++EM
Sbjct: 513 VFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEM 546
Score = 27.3 bits (59), Expect(3) = 4e-33
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 586 NGLFAIKPLKIECY---LTNTEISNLWHNRLGHIS 491
N LF ++ IE + + T SNLWH R GH++
Sbjct: 348 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLN 382
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 105 bits (262), Expect(3) = 6e-33
Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = -2
Query: 435 STSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYS 259
S + C CI K +KPF K R+ S CLE+IH+DLCGP+ ++ RY L+F+DD+S
Sbjct: 580 SVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHS 639
Query: 258 KMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
+M+W + ++ K+E FE F F+ V+ + I LRTD EF SN+FK F
Sbjct: 640 RMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVF 691
Score = 54.7 bits (130), Expect(3) = 6e-33
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
VF E++G+ REL PY+P+QNGVAERKNRT++EM
Sbjct: 690 VFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEM 723
Score = 27.3 bits (59), Expect(3) = 6e-33
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 586 NGLFAIKPLKIECY---LTNTEISNLWHNRLGHIS 491
N LF ++ IE + + T SNLWH R GH++
Sbjct: 525 NKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLN 559
>ref|XP_006590044.1| PREDICTED: uncharacterized protein LOC102665857 [Glycine max]
Length = 678
Score = 111 bits (278), Expect(3) = 3e-32
Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = -2
Query: 423 CNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTW 247
C C++ K RK F K T ++ LE+IH+D+CGPI P ++ + +Y L+F DDYS+ TW
Sbjct: 419 CERCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTW 478
Query: 246 CFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEF 112
+ +K+KSEVFENF F+ V+ E L I +R+D G EFTSN+F
Sbjct: 479 VYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKF 523
Score = 48.5 bits (114), Expect(3) = 3e-32
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
+ E GIRR L VP +PQQNGVAERKNRT++ M+
Sbjct: 526 YCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMV 559
Score = 25.0 bits (53), Expect(3) = 3e-32
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 550 CYLTNTEISNLWHNRLGHISNVYLEKI 470
CY T+ S LWH R GH++ LE++
Sbjct: 377 CY---TDSSWLWHLRFGHLNFDGLERL 400
>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1307
Score = 114 bits (285), Expect(2) = 7e-32
Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Frame = -2
Query: 441 PISTSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDD 265
P C +C++ K R+PF K+ T S+ LE++H DLCGPIT +T +KRYIL+ DD
Sbjct: 422 PKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDD 481
Query: 264 YSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*FFLK 94
+++ W L+K+KSE FE F DF+ KV+ E +KI RTD G EF S EF+ F K
Sbjct: 482 HTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAK 538
Score = 49.3 bits (116), Expect(2) = 7e-32
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
F K+GI R L PYTPQQNGV ER+NRTL+ M
Sbjct: 535 FCAKEGINRHLTAPYTPQQNGVVERRNRTLLGM 567
>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
Length = 3048
Score = 101 bits (251), Expect(3) = 7e-31
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = -2
Query: 504 LDISAMYTWRK*TTVSHGPKNPISTSKCNNCIMAKLHRKPFKSRTG-TTSRCLEVIHSDL 328
L + T ++ V+ P+ + C +C++ K HR ++ + L+++H+D+
Sbjct: 461 LSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGKQHRSSIPKKSNWRAAEILQLVHADI 520
Query: 327 CGPITPTTYNQKRYILIFSDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLR 148
CGPI P + ++KRY+L F+DD+S+ TW + + +KSE F F F+ V+ E + + CLR
Sbjct: 521 CGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSEAFAVFKSFKTYVEKETSSFLRCLR 580
Query: 147 TDNGTEFTSNEFK*F 103
TD G EFTS EF F
Sbjct: 581 TDRGGEFTSQEFAIF 595
Score = 50.4 bits (119), Expect(3) = 7e-31
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
+F + GIRR+L YTPQQNGVAERKNRT++ M+
Sbjct: 594 IFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMV 628
Score = 28.9 bits (63), Expect(3) = 7e-31
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -1
Query: 580 LFAI-KPLKIECYLTNTE-ISNLWHNRLGHIS 491
L+A+ +P+ C+ T TE I LWH R GH+S
Sbjct: 431 LYALSQPISSTCFNTVTEDILQLWHCRYGHLS 462
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 111 bits (278), Expect(2) = 8e-31
Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = -2
Query: 423 CNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTW 247
C C++ K RK F K T ++ LE+IH+D+CGPI P ++ + +Y L+F DDYS+ TW
Sbjct: 375 CEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTW 434
Query: 246 CFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEF 112
+ +K+KSEVFENF F+ V+ E L I +R+D G EFTSN+F
Sbjct: 435 VYFLKEKSEVFENFKKFKALVEKESGLSIKAMRSDRGGEFTSNKF 479
Score = 48.5 bits (114), Expect(2) = 8e-31
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
+ E GIRR L VP +PQQNGVAERKNRT++ M+
Sbjct: 482 YCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMV 515
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 99.4 bits (246), Expect(3) = 9e-31
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Frame = -2
Query: 423 CNNCIMAKLHRKPF---KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKM 253
C CI K RK F KS TT CLE++H+DLCGP+ + RY L+F+DDYS+
Sbjct: 478 CEGCIYGKQTRKSFPVGKSWRATT--CLELVHADLCGPMKMESLGGSRYFLMFTDDYSRF 535
Query: 252 TWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
+W + +K KSE FE F F+ V+ + KI LRTD G EF SN+F F
Sbjct: 536 SWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLF 585
Score = 57.4 bits (137), Expect(3) = 9e-31
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = -1
Query: 106 VFFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
+F E+ GIRREL PYTP+QNGVAERKNRT++EM
Sbjct: 584 LFCEENGIRRELTAPYTPEQNGVAERKNRTVVEM 617
Score = 23.5 bits (49), Expect(3) = 9e-31
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 526 SNLWHNRLGHISNVYLE 476
+NLWH R GH++ +L+
Sbjct: 442 TNLWHLRYGHLNVNWLK 458
>emb|CAN76821.1| hypothetical protein VITISV_017285 [Vitis vinifera]
Length = 672
Score = 104 bits (259), Expect(3) = 1e-30
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Frame = -2
Query: 504 LDISAMYTWRK*TTVSHGPKNPISTSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDL 328
L+ + T ++ V+ P+ I + C C++ K HR F + ++ LE++HSD+
Sbjct: 325 LNFGGLKTLQQKHMVTGLPQISIPSQVCEECVVGKQHRSQFPQGKSRRAKNVLELVHSDI 384
Query: 327 CGPITPTTYNQKRYILIFSDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLR 148
CG I PT+ K+Y++IF DDYS+ TW +++KSE F F F+ +V+ E I LR
Sbjct: 385 CGLINPTSNGGKKYLIIFIDDYSRKTWVSFLQEKSEAFSAFKSFKARVEKETGRSIKILR 444
Query: 147 TDNGTEFTSNEFK*F 103
TD G E+ SNEF+ F
Sbjct: 445 TDRGGEYCSNEFEHF 459
Score = 50.8 bits (120), Expect(3) = 1e-30
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
F + +GIRREL YTPQQNGV+ERKNRT++ M+
Sbjct: 459 FCDDQGIRRELTAAYTPQQNGVSERKNRTILNMV 492
Score = 24.6 bits (52), Expect(3) = 1e-30
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 586 NGLFAIKPLKIECYLTNT--EISNLWHNRLGHIS 491
N LF +K ++ +L ++S LWH R GH++
Sbjct: 293 NRLFPLKIDSVQSFLMAEVKDLSWLWHLRYGHLN 326
>pir||E84492 probable retroelement pol polyprotein [imported] - Arabidopsis
thaliana
Length = 531
Score = 92.8 bits (229), Expect(3) = 2e-30
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = -2
Query: 462 VSHGPKNPISTSKCNNCIMAKLHRKPFKSRTG-TTSRCLEVIHSDLCGPITPTTYNQKRY 286
+ P I + C +C++ K R+ F T ++ LE+IH DLCGPITP T RY
Sbjct: 326 IQGAPSLVIESEVCGSCLLGKQTRQSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRY 385
Query: 285 ILIFSDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK* 106
I + DDYS+ W L+K+K + F F +F+ V+ E KI TD G EF S EF
Sbjct: 386 IFVLIDDYSRYMWTVLLKEKGDAFFKFKNFKALVEKESGEKIQTFITDRGGEFVSGEFNS 445
Query: 105 F 103
F
Sbjct: 446 F 446
Score = 50.1 bits (118), Expect(3) = 2e-30
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
F E+ GIRR L PYTPQQNG ER++RTL+EM
Sbjct: 446 FCERTGIRRHLTAPYTPQQNGEVERRDRTLLEM 478
Score = 36.2 bits (82), Expect(3) = 2e-30
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = -1
Query: 586 NGLFAIKP--LKIEC-YLTNTEISNLWHNRLGHISNVYLEKI 470
N L+ +K K C YLT+T +S+LWH R+GH+S + L+ +
Sbjct: 279 NSLYKVKMGLRKEACLYLTSTSMSSLWHARMGHVSLITLKSM 320
>gb|AAZ66952.1| 117M18_33 [Brassica rapa]
Length = 681
Score = 103 bits (257), Expect(3) = 3e-30
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = -2
Query: 450 PKNPISTSKCNNCIMAKLHRKPFKSRTGTTSRC-LEVIHSDLCGPITPTTYNQKRYILIF 274
P+ ++ C +C+ K R+PF T + C LE++H DLCGPITP+T QKRY+ +
Sbjct: 454 PEIAVTKETCVSCLRGKQVRQPFPQSTAYRASCPLELVHGDLCGPITPSTPGQKRYVFVL 513
Query: 273 SDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
DDYS+ W L+++KSE + F FR + E + + RTD G EFTS++F F
Sbjct: 514 IDDYSRYMWTVLLEKKSEALDKFKRFRTVAEQETKMVLKTFRTDRGGEFTSHDFASF 570
Score = 52.0 bits (123), Expect(3) = 3e-30
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
F EK GI R L PY+PQQNGV ER+NRTL+EM
Sbjct: 570 FCEKHGINRHLTAPYSPQQNGVVERRNRTLLEM 602
Score = 22.7 bits (47), Expect(3) = 3e-30
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 526 SNLWHNRLGHIS 491
S+ WH RLGH++
Sbjct: 426 SSRWHARLGHVN 437
>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1200
Score = 105 bits (263), Expect(3) = 7e-30
Identities = 54/117 (46%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = -2
Query: 450 PKNPISTSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIF 274
P P C +C++ K R+ F K+ T S+ LE+IH DLCGPI+P T ++RYIL+
Sbjct: 415 PSAPKEKEICASCMLGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVL 474
Query: 273 SDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
DD+S+ W FL+K+KSE F F F+ V+ E KI LRTD G EF S EF+ F
Sbjct: 475 IDDHSRFMWSFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTF 531
Score = 48.9 bits (115), Expect(3) = 7e-30
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
F E++GI R L PYTPQQNGV ER+NRTL+ M
Sbjct: 531 FCEEEGIIRHLTAPYTPQQNGVVERRNRTLLGM 563
Score = 22.3 bits (46), Expect(3) = 7e-30
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 8/31 (25%)
Frame = -1
Query: 559 KIECYLTNTEISNL--------WHNRLGHIS 491
++E + NT+ L WH RLGHI+
Sbjct: 368 RVELKVKNTKCLQLAALNDLTKWHARLGHIN 398
>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
Length = 1318
Score = 102 bits (255), Expect(3) = 1e-29
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Frame = -2
Query: 423 CNNCIMAKLHRKPFKSRTGT-TSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTW 247
C C+ K R PF ++ T T+ L++IH+D+CGPI + N +Y ++F DD+S+ W
Sbjct: 493 CEVCLQGKQSRHPFPKQSQTRTANRLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCW 552
Query: 246 CFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK 109
F +KQKSE + F+ F+ V+ + + KI LR+DNG+E+TSNEFK
Sbjct: 553 IFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFK 598
Score = 48.1 bits (113), Expect(3) = 1e-29
Identities = 20/31 (64%), Positives = 29/31 (93%)
Frame = -1
Query: 94 KKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
++GI++ L VPY+PQQNGV+ERKNRT++EM+
Sbjct: 603 QEGIKQFLTVPYSPQQNGVSERKNRTIMEMI 633
Score = 25.8 bits (55), Expect(3) = 1e-29
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 526 SNLWHNRLGHISNVYLEKI 470
+ LWH RLGHI+ +++ +
Sbjct: 456 ARLWHRRLGHINYQFIKNM 474
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 102 bits (255), Expect(3) = 1e-29
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -2
Query: 423 CNNCIMAKLHRKPFKSRTG-TTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTW 247
C +C++ K R F S T +S+ LE++H+DLCGPI+P+T Q RYI + DD ++ W
Sbjct: 368 CESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMW 427
Query: 246 CFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK 109
L+K+KSEVFE F F+ V+ E N I LRTD G EFTS +F+
Sbjct: 428 SILLKEKSEVFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQ 473
Score = 50.4 bits (119), Expect(3) = 1e-29
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
+ GIRR L PYTPQQNGV ER+NRTL+EM
Sbjct: 475 YCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEM 507
Score = 23.5 bits (49), Expect(3) = 1e-29
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 574 AIKPLKIECYLTN-TEISNLWHNRLGHIS 491
++K K C LT E WH RLGHI+
Sbjct: 314 SLKVGKPSCLLTKINEEPWRWHARLGHIN 342
>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
Length = 1339
Score = 106 bits (265), Expect(3) = 3e-29
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Frame = -2
Query: 423 CNNCIMAKLHRKPFKSRTG-TTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMTW 247
C C+ K HR+ +T +S L+++HSD+CGPITP +++ KRYIL F DD+++ TW
Sbjct: 470 CAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTW 529
Query: 246 CFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEF 112
+ + +KSE F F F+ V+ E +TCLRTD G EFTSNEF
Sbjct: 530 VYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEF 574
Score = 43.1 bits (100), Expect(3) = 3e-29
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLI 11
F GI R+L +TPQQNGVAERKNRT++
Sbjct: 577 FCRSHGISRQLTAAFTPQQNGVAERKNRTIM 607
Score = 25.4 bits (54), Expect(3) = 3e-29
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -1
Query: 580 LFAIKPLKIECYLTNTEI----SNLWHNRLGHIS 491
L A KP K L E+ ++LWH R GH++
Sbjct: 411 LLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLN 444
>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974460|gb|EFV57947.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1324
Score = 96.3 bits (238), Expect(3) = 3e-29
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = -2
Query: 450 PKNPISTSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIF 274
P + I+ + C C+ K R PF KS T + LE++HSD+CGP+ + RY L F
Sbjct: 448 PSDAITKTDCVTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSF 507
Query: 273 SDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*FFLK 94
DD+S+ ++ + +K K+EV F DF V+ + + ++ CLRTDNG E+ +N F F ++
Sbjct: 508 IDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVR 567
Query: 93 R 91
+
Sbjct: 568 K 568
Score = 48.9 bits (115), Expect(3) = 3e-29
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIE 8
F +KGIR E +P TPQQNGVAER NRTL+E
Sbjct: 564 FLVRKGIRHERTIPETPQQNGVAERMNRTLVE 595
Score = 30.0 bits (66), Expect(3) = 3e-29
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 595 SEHNGLFAIKPLKIECYLTNTEISNLWHNRLGHIS 491
+++NGL+ + + +T ++ +LWH RLGH+S
Sbjct: 399 TQYNGLYRLNRCD-QWAMTVHDVPDLWHRRLGHLS 432
>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trichinella spiralis] gi|316974954|gb|EFV58419.1|
retrovirus-related Pol polyprotein from transposon TNT
1-94 [Trichinella spiralis]
Length = 1003
Score = 96.7 bits (239), Expect(3) = 6e-29
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = -2
Query: 450 PKNPISTSKCNNCIMAKLHRKPF-KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIF 274
P + I+ + C C+ K R PF KS T + LE++HSD+CGP+ + RY L F
Sbjct: 141 PSDAITKTDCVTCLKGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSF 200
Query: 273 SDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*FFLK 94
DD+S+ ++ + +K K+EV F DF V+ + + ++ CLRTDNG E+ +N F F ++
Sbjct: 201 IDDFSRKSFVYFLKHKNEVLSKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVR 260
Query: 93 R 91
+
Sbjct: 261 K 261
Score = 48.9 bits (115), Expect(3) = 6e-29
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIE 8
F +KGIR E +P TPQQNGVAER NRTL+E
Sbjct: 257 FLVRKGIRHERTIPETPQQNGVAERMNRTLVE 288
Score = 28.5 bits (62), Expect(3) = 6e-29
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -1
Query: 595 SEHNGLFAIKPLKIECYLTNTEISNLWHNRLGHIS 491
+++NGL+ + + +T ++ +LWH +LGH+S
Sbjct: 92 TQYNGLYRLNRCD-QWAMTVHDVPDLWHRQLGHLS 125
>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 822
Score = 105 bits (261), Expect(3) = 6e-29
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = -2
Query: 450 PKNPISTSKCNNCIMAKLHRKPFKSRTGTTSRC-LEVIHSDLCGPITPTTYNQKRYILIF 274
PK + KC +CI++K R PF + T ++ LE+IHSD+CGP+ ++ N RYIL F
Sbjct: 185 PKFNVEEGKCESCILSKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTF 244
Query: 273 SDDYSKMTWCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK*F 103
DD ++M W + +K KSEVF+ F F+ V+ N +I LR D GTE+ S EF F
Sbjct: 245 IDDATRMVWVYFLKAKSEVFQTFKKFKNLVENNANCRIKKLRIDRGTEYLSKEFSEF 301
Score = 44.3 bits (103), Expect(3) = 6e-29
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1
Query: 103 FFEKKGIRRELIVPYTPQQNGVAERKNRTLIEM 5
F E GI R+L Y+PQQN V+ER+NR+L+EM
Sbjct: 301 FLEGNGIERQLTAAYSPQQNEVSERRNRSLVEM 333
Score = 24.6 bits (52), Expect(3) = 6e-29
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 532 EISNLWHNRLGHISNVYLE 476
E + LWH RLGH + L+
Sbjct: 155 EATELWHKRLGHTGHSNLK 173
>gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
Length = 1266
Score = 102 bits (255), Expect(3) = 8e-29
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Frame = -2
Query: 423 CNNCIMAKLHRKPF--KSRTGTTSRCLEVIHSDLCGPITPTTYNQKRYILIFSDDYSKMT 250
C C+ K R PF +S+T T+R L++IH+D+CGPI + N +Y ++F DD+S+
Sbjct: 493 CEVCLQGKQSRHPFPKQSQTRATNR-LQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFC 551
Query: 249 WCFLIKQKSEVFENFIDFRKKVQTERNLKITCLRTDNGTEFTSNEFK 109
W F +KQKSE + F+ F+ V+ + + KI LR+DNG+E+TSNEFK
Sbjct: 552 WIFFLKQKSEAIQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFK 598
Score = 45.1 bits (105), Expect(3) = 8e-29
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = -1
Query: 94 KKGIRRELIVPYTPQQNGVAERKNRTLIEMM 2
++GI++ L V Y+PQQNGV+ERKNRT++EM+
Sbjct: 603 QEGIKQFLTVTYSPQQNGVSERKNRTIMEMI 633
Score = 25.8 bits (55), Expect(3) = 8e-29
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 526 SNLWHNRLGHISNVYLEKI 470
+ LWH RLGHI+ +++ +
Sbjct: 456 ARLWHRRLGHINYQFIKNM 474