BLASTX nr result
ID: Ephedra25_contig00015172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015172
(1103 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec... 354 3e-95
ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [A... 354 4e-95
ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citr... 353 7e-95
gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus... 353 9e-95
gb|AFK44906.1| unknown [Medicago truncatula] 352 1e-94
gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kD... 352 2e-94
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec... 351 3e-94
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin... 351 3e-94
gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus pe... 350 4e-94
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p... 350 6e-94
ref|XP_004496579.1| PREDICTED: cleavage and polyadenylation spec... 350 8e-94
ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation spec... 350 8e-94
ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea ma... 348 3e-93
ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [S... 347 4e-93
ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation spec... 347 6e-93
ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group] g... 346 8e-93
emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group] 346 8e-93
gb|ACG33128.1| cleavage and polyadenylation specificity factor 5... 345 1e-92
ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Popu... 345 1e-92
emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group] 345 1e-92
>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product
[Vitis vinifera]
Length = 200
Score = 354 bits (909), Expect = 3e-95
Identities = 170/198 (85%), Positives = 176/198 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG LQPDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMV 208
PVISTIPQQLSRF M+
Sbjct: 181 PVISTIPQQLSRFQFNMM 198
>ref|XP_006827703.1| hypothetical protein AMTR_s00009p00259100 [Amborella trichopoda]
gi|548832323|gb|ERM95119.1| hypothetical protein
AMTR_s00009p00259100 [Amborella trichopoda]
Length = 200
Score = 354 bits (908), Expect = 4e-95
Identities = 170/199 (85%), Positives = 177/199 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + VVNAYPLSSYTFGTKEPKMEKDTSVA+RLARM+VNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSSVVNAYPLSSYTFGTKEPKMEKDTSVAERLARMRVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG LQPDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANAAALQPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVN 205
PVISTIPQQLSRF M+N
Sbjct: 181 PVISTIPQQLSRFQFNMIN 199
>ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citrus clementina]
gi|568874546|ref|XP_006490376.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Citrus sinensis] gi|557523777|gb|ESR35144.1|
hypothetical protein CICLE_v10005929mg [Citrus
clementina]
Length = 200
Score = 353 bits (906), Expect = 7e-95
Identities = 170/198 (85%), Positives = 175/198 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMV 208
PVISTIPQQLSRF M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198
>gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus vulgaris]
Length = 200
Score = 353 bits (905), Expect = 9e-95
Identities = 170/200 (85%), Positives = 175/200 (87%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M S VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENE+EG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEMEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF KM+ N
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200
>gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 352 bits (904), Expect = 1e-94
Identities = 170/200 (85%), Positives = 174/200 (87%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF KM+ N
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200
>gb|EOY23171.1| Cleavage/polyadenylation specificity factor, 25kDa subunit
[Theobroma cacao]
Length = 200
Score = 352 bits (903), Expect = 2e-94
Identities = 169/198 (85%), Positives = 175/198 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + PVVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSE+EYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMV 208
PVISTIPQQLSRF M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198
>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Cucumis sativus]
Length = 200
Score = 351 bits (901), Expect = 3e-94
Identities = 168/198 (84%), Positives = 175/198 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + PVVN YPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG LQPDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMV 208
PVISTIPQQLSRF M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198
>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 351 bits (901), Expect = 3e-94
Identities = 170/200 (85%), Positives = 174/200 (87%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M S VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENE EG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF KM+ N
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200
>gb|EMJ19638.1| hypothetical protein PRUPE_ppa011679mg [Prunus persica]
Length = 200
Score = 350 bits (899), Expect = 4e-94
Identities = 168/200 (84%), Positives = 176/200 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + VVN YPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF M+++
Sbjct: 181 PVISTIPQQLSRFQFNMISS 200
>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 200
Score = 350 bits (898), Expect = 6e-94
Identities = 169/198 (85%), Positives = 174/198 (87%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMV 208
PVISTIPQQLSRF M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198
>ref|XP_004496579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cicer arietinum]
Length = 202
Score = 350 bits (897), Expect = 8e-94
Identities = 167/195 (85%), Positives = 173/195 (88%)
Frame = -3
Query: 786 VVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 607
VVN YPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHNHPHIL
Sbjct: 8 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEGILLVQEHNHPHIL 67
Query: 606 LLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRPNFE 427
LLQIGNTFCKLPGGRLKPGENE+EG L PDW++GECVAIWWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGANSAALVPDWQIGECVAIWWRPNFE 127
Query: 426 TLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 247
T+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST
Sbjct: 128 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 246 IPQQLSRFTIKMVNN 202
IPQQLSRF KM+ N
Sbjct: 188 IPQQLSRFQFKMITN 202
>ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Fragaria vesca subsp. vesca]
Length = 200
Score = 350 bits (897), Expect = 8e-94
Identities = 168/200 (84%), Positives = 176/200 (88%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + +VN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSAMVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSANLVPDWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLFLV LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF M+++
Sbjct: 181 PVISTIPQQLSRFQFNMISS 200
>ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|514741959|ref|XP_004960022.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Setaria italica] gi|194705542|gb|ACF86855.1| unknown
[Zea mays] gi|218195850|gb|EEC78277.1| hypothetical
protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein
OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and
polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 348 bits (892), Expect = 3e-93
Identities = 165/198 (83%), Positives = 175/198 (88%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W+VGECVA+WWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 255 ISTIPQQLSRFTIKMVNN 202
ISTIPQQLSRF MV++
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein
SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 347 bits (891), Expect = 4e-93
Identities = 164/198 (82%), Positives = 175/198 (88%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W++GECVA+WWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRP 124
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 255 ISTIPQQLSRFTIKMVNN 202
ISTIPQQLSRF MV++
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X1 [Solanum tuberosum]
gi|565373499|ref|XP_006353310.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X2 [Solanum tuberosum]
gi|565373501|ref|XP_006353311.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X3 [Solanum tuberosum]
gi|565373503|ref|XP_006353312.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X4 [Solanum tuberosum]
Length = 200
Score = 347 bits (889), Expect = 6e-93
Identities = 165/200 (82%), Positives = 175/200 (87%)
Frame = -3
Query: 801 MFSGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 622
M + VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNY KEGMRTSVE ILLVQEHN
Sbjct: 1 MVTSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHN 60
Query: 621 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWW 442
HPHILLLQIGNTFCKLPGGRLKPGENEIEG +QP+W++GECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQIGECVAIWW 120
Query: 441 RPNFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 262
RPNFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
Query: 261 PVISTIPQQLSRFTIKMVNN 202
PVISTIPQQLSRF M+++
Sbjct: 181 PVISTIPQQLSRFQFNMIHS 200
>ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial
[Oryza sativa Japonica Group]
Length = 259
Score = 346 bits (888), Expect = 8e-93
Identities = 164/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 62 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHP 121
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W+VGECVA+WWRP
Sbjct: 122 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 181
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 182 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 241
Query: 255 ISTIPQQLSRFTIKMVNN 202
ISTIPQQLSRF MV++
Sbjct: 242 ISTIPQQLSRFQFNMVSS 259
>emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 346 bits (888), Expect = 8e-93
Identities = 164/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W+VGECVA+WWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 255 ISTIPQQLSRFTIKMVNN 202
ISTIPQQLSRF MV++
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 345 bits (886), Expect = 1e-92
Identities = 164/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W+VGECVA+WWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V L EREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 255 ISTIPQQLSRFTIKMVNN 202
ISTIPQQLSRF MV++
Sbjct: 185 ISTIPQQLSRFQFNMVSS 202
>ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Populus trichocarpa]
gi|118487488|gb|ABK95571.1| unknown [Populus
trichocarpa] gi|222868907|gb|EEF06038.1| hypothetical
protein POPTR_0015s13200g [Populus trichocarpa]
Length = 202
Score = 345 bits (886), Expect = 1e-92
Identities = 166/193 (86%), Positives = 171/193 (88%)
Frame = -3
Query: 786 VVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 607
VVN YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL
Sbjct: 8 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 67
Query: 606 LLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRPNFE 427
LLQIGNTFCKLPGGRLKPGENEIEG L PDW++GECVA WWRPNFE
Sbjct: 68 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVATWWRPNFE 127
Query: 426 TLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 247
T+MYPYCPPHITKPKECKKL+LV LSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST
Sbjct: 128 TIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 187
Query: 246 IPQQLSRFTIKMV 208
IPQQLSRF M+
Sbjct: 188 IPQQLSRFQFNMI 200
>emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 345 bits (886), Expect = 1e-92
Identities = 164/195 (84%), Positives = 172/195 (88%)
Frame = -3
Query: 795 SGPVVNAYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 616
S PVVN YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP
Sbjct: 5 SSPVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 64
Query: 615 HILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXLQPDWKVGECVAIWWRP 436
HILLLQIGNTFCKLPGGRLKPGENEIEG P+W+VGECVA+WWRP
Sbjct: 65 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 124
Query: 435 NFETLMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 256
NFET+MYPYCPPHITKPKECKKLF+V LSEREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 125 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 184
Query: 255 ISTIPQQLSRFTIKM 211
ISTIPQQLSRF M
Sbjct: 185 ISTIPQQLSRFQFNM 199