BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00015164
         (719 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica]                236   6e-75
gb|ABK24371.1| unknown [Picea sitchensis]                             234   3e-74
ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [C...   230   1e-71
ref|XP_006427690.1| hypothetical protein CICLE_v100258682mg, par...   229   3e-71
ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   232   6e-71
ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [S...   226   6e-71
ref|XP_002312393.1| hypothetical protein POPTR_0008s11840g [Popu...   230   6e-71
gb|ABD96879.1| hypothetical protein [Cleome spinosa]                  228   1e-70
ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23...   224   1e-70
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   227   2e-70
ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [A...   223   4e-70
gb|ACN40029.1| unknown [Picea sitchensis]                             218   7e-70
ref|XP_006846642.1| hypothetical protein AMTR_s00156p00078120 [A...   227   9e-70
ref|XP_004161413.1| PREDICTED: putative DNA repair protein RAD23...   220   1e-69
ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23...   220   1e-69
gb|EXC14085.1| Putative DNA repair protein RAD23-1 [Morus notabi...   220   2e-69
ref|XP_006299986.1| hypothetical protein CARUB_v10016200mg [Caps...   226   3e-69
ref|NP_186903.1| UV excision repair protein RAD23C [Arabidopsis ...   223   3e-69
ref|NP_001189793.1| UV excision repair protein RAD23C [Arabidops...   223   3e-69
gb|ABB02636.1| RAD23-like [Solanum tuberosum]                         226   3e-69

>gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica]
          Length = 390

 Score =  236 bits (603), Expect(2) = 6e-75
 Identities = 123/179 (68%), Positives = 139/179 (77%), Gaps = 12/179 (6%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y EAAS LV G++LEQTIQQ+LDMGGG+WDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 144 YGEAASILVAGSNLEQTIQQMLDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPETA 203

Query: 260 EIAVPVAHPSSGEAAVSNQEQN----------PSAAPSGGPNVAPLNLFPQGAPNI--AT 403
           EIAVPVA         ++Q  N           + APSGGPN APLNLFPQG PN+  A 
Sbjct: 204 EIAVPVARSPPSNPGATDQGTNNVIAGESDSAEATAPSGGPNAAPLNLFPQGLPNLGAAA 263

Query: 404 GNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           G G LDFLR+N QFQ LR+MVQ NPQILQPMLQELSKQNPQLM LI+++Q EFL LINE
Sbjct: 264 GGGALDFLRNNPQFQALRTMVQANPQILQPMLQELSKQNPQLMRLIQDHQAEFLHLINE 322



 Score = 71.6 bits (174), Expect(2) = 6e-75
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LVIEAFLACDKNE+LAANYLLE
Sbjct: 342 VTPEEREAIERLEAMGFDRALVIEAFLACDKNEELAANYLLE 383


>gb|ABK24371.1| unknown [Picea sitchensis]
          Length = 390

 Score =  234 bits (597), Expect(2) = 3e-74
 Identities = 122/179 (68%), Positives = 137/179 (76%), Gaps = 12/179 (6%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y EAAS LV G++LEQTIQQ+LDMGGG+WDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 144 YGEAASILVAGSNLEQTIQQMLDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPETA 203

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAA----------PSGGPNVAPLNLFPQGAPNI--AT 403
           EIAVPVA      +  + Q  N   A          PSGGPN APLNLFPQG PN+    
Sbjct: 204 EIAVPVARSPPSNSGAAGQGTNDVVAAESDLAQATVPSGGPNAAPLNLFPQGLPNLGATA 263

Query: 404 GNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           G G LDFLR+N QFQ LR+MVQ NPQILQPMLQELSKQNPQLM LI+++Q EFL LINE
Sbjct: 264 GGGALDFLRNNPQFQALRTMVQANPQILQPMLQELSKQNPQLMRLIQDHQAEFLHLINE 322



 Score = 71.6 bits (174), Expect(2) = 3e-74
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LVIEAFLACDKNE+LAANYLLE
Sbjct: 342 VTPEEREAIERLEAMGFDRALVIEAFLACDKNEELAANYLLE 383


>ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [Citrus sinensis]
          Length = 377

 Score =  230 bits (586), Expect(2) = 1e-71
 Identities = 122/172 (70%), Positives = 140/172 (81%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN LEQTIQQI+DMGGGTWD+ETV RAL+AAYNNPERA+DYLYSGIPE A
Sbjct: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAP-SGGPNVAPLNLFPQ----GAPNIATGNGTLDF 424
           E+AVPVAH  + +AA +       AAP SG PN +PLN+FPQ    GAP  A+G G+LDF
Sbjct: 200 EVAVPVAHFPASQAAETGA---AGAAPVSGVPNSSPLNMFPQETLSGAP--ASGLGSLDF 254

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ LI+E+Q EFL LINE
Sbjct: 255 LRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINE 306



 Score = 67.0 bits (162), Expect(2) = 1e-71
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT  E  AI+RLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 329 VTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLE 370


>ref|XP_006427690.1| hypothetical protein CICLE_v100258682mg, partial [Citrus
           clementina] gi|557529680|gb|ESR40930.1| hypothetical
           protein CICLE_v100258682mg, partial [Citrus clementina]
          Length = 301

 Score =  229 bits (583), Expect(2) = 3e-71
 Identities = 122/172 (70%), Positives = 139/172 (80%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN LEQTIQQI+DMGGGTWD+ETV RAL+AAYNNPERA+DYLYSGIPE A
Sbjct: 64  YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 123

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAP-SGGPNVAPLNLFPQ----GAPNIATGNGTLDF 424
           E+AVPVAH  + +AA +       AAP SG PN +PLN+FPQ    GAP  A G G+LDF
Sbjct: 124 EVAVPVAHFPASQAAETGA---AGAAPVSGVPNSSPLNMFPQETLSGAP--AGGLGSLDF 178

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ LI+E+Q EFL LINE
Sbjct: 179 LRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQTEFLQLINE 230



 Score = 67.0 bits (162), Expect(2) = 3e-71
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT  E  AI+RLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 253 VTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLE 294


>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  232 bits (592), Expect(2) = 6e-71
 Identities = 118/171 (69%), Positives = 137/171 (80%), Gaps = 4/171 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN+ E+ IQQILDMGGGTWDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 156 YGQAASNLVAGNNFEEAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 215

Query: 260 EIAVPVAHPSSGEAA-VSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIAT---GNGTLDFL 427
           E+      P+SG+AA    Q Q P  APS GPN  PL+LFPQG PN+ +   G GTLDFL
Sbjct: 216 EVPPVARAPASGQAANPPAQSQQPVPAPSSGPNANPLDLFPQGIPNVGSNPAGAGTLDFL 275

Query: 428 RDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           R+++QFQ LR+MVQ NPQILQPMLQEL KQNPQLM LI+E+Q +FL LINE
Sbjct: 276 RNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINE 326



 Score = 62.4 bits (150), Expect(2) = 6e-71
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AI RLEAMGF+ +LV+E F AC+KNE+LAANYLL+
Sbjct: 349 VTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAANYLLD 390


>ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [Solanum tuberosum]
          Length = 367

 Score =  226 bits (575), Expect(2) = 6e-71
 Identities = 120/175 (68%), Positives = 138/175 (78%), Gaps = 8/175 (4%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y++AASNLV GNSLEQTIQQ++DMGGG+WD+ETV RALRAAYNNPERA+DYLYSGIPE A
Sbjct: 129 YSQAASNLVAGNSLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETA 188

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAP----SGGPNVAPLNLFPQGAPNIA----TGNGT 415
           E+AVPVA      AA +     P+AAP    SG PN APLNLFPQ   N+A     G G+
Sbjct: 189 EVAVPVARGGVNSAAAA-----PTAAPTPPSSGAPNSAPLNLFPQ--ENVAGAGSAGLGS 241

Query: 416 LDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+  I+E+ +EFL LINE
Sbjct: 242 LDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFLQLINE 296



 Score = 68.9 bits (167), Expect(2) = 6e-71
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE   IERLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 319 VTPEEQEVIERLEAMGFDRALVIEAFLACDRNEELAANYLLE 360


>ref|XP_002312393.1| hypothetical protein POPTR_0008s11840g [Populus trichocarpa]
           gi|222852213|gb|EEE89760.1| hypothetical protein
           POPTR_0008s11840g [Populus trichocarpa]
          Length = 333

 Score =  230 bits (586), Expect(2) = 6e-71
 Identities = 120/174 (68%), Positives = 142/174 (81%), Gaps = 7/174 (4%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AAS+LV G++LE  +QQILDMGGGTWDR+TVVRALRAAYNNPERAI+YLYSGIPE A
Sbjct: 92  YGQAASSLVAGSNLEVAVQQILDMGGGTWDRDTVVRALRAAYNNPERAIEYLYSGIPEQA 151

Query: 260 EIAVPVAH-PSSGEAAVSNQEQNP---SAAPSGGPNVAPLNLFPQGAPNI---ATGNGTL 418
           E A PVAH P  G+A  +  +Q+P   +A PSGGPN  PL+LFPQG PN+   A G GTL
Sbjct: 152 E-APPVAHMPLGGQAPAAQPQQHPTQTAAVPSGGPNANPLDLFPQGLPNVGSGAGGAGTL 210

Query: 419 DFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           DFLR+++QFQ LR+MVQ NPQILQPMLQEL KQNP LM LI+E+Q++FL LINE
Sbjct: 211 DFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQDDFLRLINE 264



 Score = 64.7 bits (156), Expect(2) = 6e-71
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LV+E F AC+KNE+LAANYLL+
Sbjct: 287 VTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLD 328


>gb|ABD96879.1| hypothetical protein [Cleome spinosa]
          Length = 383

 Score =  228 bits (581), Expect(2) = 1e-70
 Identities = 116/172 (67%), Positives = 137/172 (79%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV G++LE TIQQILDMGGG+WDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 140 YGQAASNLVAGSNLEATIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 199

Query: 260 EIAVPVAHPSSGEAAV---SNQEQNPSAAPSGGPNVAPLNLFPQGAPNIA--TGNGTLDF 424
           E+      P+SG       +   Q P+AAP+ GPN  PL+LFPQG PN+   TG GTLDF
Sbjct: 200 EVPPVAQAPASGGQPTNPPAQAGQQPAAAPTSGPNANPLDLFPQGLPNVGSNTGAGTLDF 259

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+++QFQ LR+MVQ NPQILQPMLQEL KQNPQLM LI+E+Q +FL LINE
Sbjct: 260 LRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINE 311



 Score = 65.5 bits (158), Expect(2) = 1e-70
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGFE  LV+E F AC+KNE+LAANYLL+
Sbjct: 335 VTPEEREAIERLEAMGFERGLVLEVFFACNKNEELAANYLLD 376


>ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23-1-like [Solanum
           lycopersicum]
          Length = 366

 Score =  224 bits (572), Expect(2) = 1e-70
 Identities = 117/171 (68%), Positives = 135/171 (78%), Gaps = 4/171 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y++AASNLV GN+LEQTIQQ++DMGGG+WD+ETV RALRAAYNNPERA+DYLYSGIPE A
Sbjct: 129 YSQAASNLVAGNNLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETA 188

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIATGN----GTLDFL 427
           E++VPVA      AAV      P A  SG PN APLNLFPQ   N+A G     G+LDFL
Sbjct: 189 EVSVPVARGGVNSAAVPTAA--PIAPSSGAPNSAPLNLFPQ--ENVAGGGGAGLGSLDFL 244

Query: 428 RDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           R+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+  I+E+ +EFL LINE
Sbjct: 245 RNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFLQLINE 295



 Score = 68.9 bits (167), Expect(2) = 1e-70
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE   IERLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 318 VTPEEQEVIERLEAMGFDRALVIEAFLACDRNEELAANYLLE 359


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223547781|gb|EEF49273.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 359

 Score =  227 bits (579), Expect(2) = 2e-70
 Identities = 117/172 (68%), Positives = 137/172 (79%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y EAASNLV G++LEQTIQQI+DMGGGTWD+ETV RALRAAYNNPERA+DYLYSGIPE A
Sbjct: 119 YGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLYSGIPETA 178

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIATGN-----GTLDF 424
           E+AVPVAH  +G+A  +     P+A  SG PN +PLN+FPQ A + A G      G+LDF
Sbjct: 179 EVAVPVAHLPAGQATETGAA--PAAPLSGVPNSSPLNMFPQEALSAAGGGSAGGLGSLDF 236

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+N QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ +I+E+  EFL L+NE
Sbjct: 237 LRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRMIQEHHAEFLQLLNE 288



 Score = 65.9 bits (159), Expect(2) = 2e-70
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT  E AAIERL AMGF+ +LVIEAFLACD+NE LAANYLLE
Sbjct: 311 VTPAEQAAIERLVAMGFDRALVIEAFLACDRNEVLAANYLLE 352


>ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [Amborella trichopoda]
           gi|548848021|gb|ERN07124.1| hypothetical protein
           AMTR_s00019p00116110 [Amborella trichopoda]
          Length = 370

 Score =  223 bits (569), Expect(2) = 4e-70
 Identities = 116/171 (67%), Positives = 136/171 (79%), Gaps = 4/171 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AAS LV GN+LEQ IQQILDMGG +WDR+TV RALRAAYNNPERA++YLYSGIP  A
Sbjct: 130 YGQAASTLVAGNNLEQMIQQILDMGGDSWDRDTVTRALRAAYNNPERAVEYLYSGIPAAA 189

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPS--AAPSGGPNVAPLNLFPQGAP--NIATGNGTLDFL 427
           E+AVPV  P+S +AA +  E + +  A  S GPN +PLN+FPQG+P      G G+LDFL
Sbjct: 190 EVAVPVV-PTSAQAADATTEADVAGVAPNSAGPNASPLNMFPQGSPTSGAIAGGGSLDFL 248

Query: 428 RDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           R+NEQFQ LR MVQ NPQILQPMLQELSKQNPQL+ LI+E+Q EFL LINE
Sbjct: 249 RNNEQFQTLRHMVQANPQILQPMLQELSKQNPQLLRLIQEHQAEFLQLINE 299



 Score = 68.6 bits (166), Expect(2) = 4e-70
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LVIEAFLACD+NE+LA NYLLE
Sbjct: 322 VTPEEREAIERLEAMGFDRALVIEAFLACDRNEELAINYLLE 363


>gb|ACN40029.1| unknown [Picea sitchensis]
          Length = 403

 Score =  218 bits (556), Expect(2) = 7e-70
 Identities = 118/195 (60%), Positives = 136/195 (69%), Gaps = 28/195 (14%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN+LE  IQQILDMGGG+WDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 138 YGQAASNLVAGNNLEHVIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPETA 197

Query: 260 EIAVPVAH--PSSGEA--------AVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNI---- 397
           E+A PVA   PS G+A        A +      SA    GPN APL+LFPQG PN+    
Sbjct: 198 EVAPPVARPTPSVGQAANPTAPAPAAAAAAAAASATAQAGPNAAPLDLFPQGLPNLGAGA 257

Query: 398 --------------ATGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMG 535
                           G G LDFLR+N QFQ LR+MVQ NPQILQPMLQELSKQNPQLM 
Sbjct: 258 GAGAGAGLGAGAGAGAGAGALDFLRNNPQFQALRTMVQANPQILQPMLQELSKQNPQLMR 317

Query: 536 LIEENQEEFLSLINE 580
           LI+++Q +FL L+NE
Sbjct: 318 LIQDHQADFLRLVNE 332



 Score = 72.8 bits (177), Expect(2) = 7e-70
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LVIEAFLACDKNEQLAANYLLE
Sbjct: 355 VTPEEREAIERLEAMGFDRALVIEAFLACDKNEQLAANYLLE 396


>ref|XP_006846642.1| hypothetical protein AMTR_s00156p00078120 [Amborella trichopoda]
           gi|548849494|gb|ERN08317.1| hypothetical protein
           AMTR_s00156p00078120 [Amborella trichopoda]
          Length = 389

 Score =  227 bits (579), Expect(2) = 9e-70
 Identities = 118/173 (68%), Positives = 135/173 (78%), Gaps = 6/173 (3%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV G++LEQ IQQILDMGGG+WDR+TVVRALRAAYNNPERA++YLYSGIPE A
Sbjct: 145 YGQAASNLVAGSNLEQAIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 204

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAA----PSGGPNVAPLNLFPQGAPNI--ATGNGTLD 421
           E   PVA   +   AV+   Q P AA    PS GPN  PL+LFPQG PN+  A G GTLD
Sbjct: 205 EAPAPVARSPASGPAVNPSVQAPQAAQPAVPSSGPNANPLDLFPQGLPNMGGAAGAGTLD 264

Query: 422 FLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           FLR+++QFQ LR M Q NPQILQPMLQEL KQNPQLM LI+E+Q +FL LINE
Sbjct: 265 FLRNSQQFQALRDMFQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINE 317



 Score = 63.5 bits (153), Expect(2) = 9e-70
 Identities = 29/42 (69%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEA+GF+ +LV+E F AC+KNE+LAANYLL+
Sbjct: 341 VTPEEREAIERLEALGFDRALVLEVFFACNKNEELAANYLLD 382


>ref|XP_004161413.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
           sativus]
          Length = 401

 Score =  220 bits (560), Expect(2) = 1e-69
 Identities = 112/172 (65%), Positives = 134/172 (77%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN+LEQT+QQ++DMGGG WDRETVVRALRAAYNNPERA+DYLYSGIPE A
Sbjct: 161 YGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESA 220

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIATGN-----GTLDF 424
           E+AVPV    SG+A  +  + +  A  SG PN APLN+FPQ A +  +G      G+L+F
Sbjct: 221 EVAVPVGRFGSGQA--TETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEF 278

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+N QFQ LR+MV  NPQILQPMLQEL KQNPQL+ LI+++  EFL LINE
Sbjct: 279 LRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINE 330



 Score = 70.1 bits (170), Expect(2) = 1e-69
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT  E AAIERLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 353 VTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLE 394


>ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
           sativus]
          Length = 358

 Score =  220 bits (560), Expect(2) = 1e-69
 Identities = 112/172 (65%), Positives = 134/172 (77%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV GN+LEQT+QQ++DMGGG WDRETVVRALRAAYNNPERA+DYLYSGIPE A
Sbjct: 118 YGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESA 177

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIATGN-----GTLDF 424
           E+AVPV    SG+A  +  + +  A  SG PN APLN+FPQ A +  +G      G+L+F
Sbjct: 178 EVAVPVGRFGSGQA--TETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEF 235

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+N QFQ LR+MV  NPQILQPMLQEL KQNPQL+ LI+++  EFL LINE
Sbjct: 236 LRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINE 287



 Score = 70.1 bits (170), Expect(2) = 1e-69
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT  E AAIERLEAMGF+ +LVIEAFLACD+NE+LAANYLLE
Sbjct: 310 VTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLE 351


>gb|EXC14085.1| Putative DNA repair protein RAD23-1 [Morus notabilis]
          Length = 421

 Score =  220 bits (561), Expect(2) = 2e-69
 Identities = 114/170 (67%), Positives = 131/170 (77%), Gaps = 3/170 (1%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV G++LEQTIQQI+DMGGG WDRETV RALRAAYNNPERA+DYLYSGIPE A
Sbjct: 184 YGQAASNLVAGSNLEQTIQQIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAA 243

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQ---GAPNIATGNGTLDFLR 430
           E+AVPVA   + +A  +     P+   SG PN APLN+FPQ            G+LDFLR
Sbjct: 244 EVAVPVARFPASQATETGATTAPA---SGAPNSAPLNMFPQETLAGAGAGGALGSLDFLR 300

Query: 431 DNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           +N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ LI+E+Q EFL LINE
Sbjct: 301 NNQQFQTLRSMVQANPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLINE 350



 Score = 69.3 bits (168), Expect(2) = 2e-69
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LVIEA+LACD+NE+LAANYLLE
Sbjct: 373 VTPEEQEAIERLEAMGFDRALVIEAYLACDRNEELAANYLLE 414


>ref|XP_006299986.1| hypothetical protein CARUB_v10016200mg [Capsella rubella]
           gi|482568695|gb|EOA32884.1| hypothetical protein
           CARUB_v10016200mg [Capsella rubella]
          Length = 427

 Score =  226 bits (576), Expect(2) = 3e-69
 Identities = 114/171 (66%), Positives = 136/171 (79%), Gaps = 4/171 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNL  G++LE TIQQILDMGGGTWDR+TVVRALRAA+NNPERA++YLYSGIPE A
Sbjct: 182 YGQAASNLAAGSNLESTIQQILDMGGGTWDRDTVVRALRAAFNNPERAVEYLYSGIPEQA 241

Query: 260 EIAVPVAHPSSG--EAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIA--TGNGTLDFL 427
           E+      P+SG   A+   Q Q P+AAP+ GPN  PLNLFPQG PN+    G GTLDFL
Sbjct: 242 EVPPVSRAPASGGQPASPPAQTQQPAAAPASGPNANPLNLFPQGLPNVGGNPGAGTLDFL 301

Query: 428 RDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           R+++QFQ LR+MVQ NPQ+LQPMLQEL KQNP LM LI+++Q +FL LINE
Sbjct: 302 RNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINE 352



 Score = 63.2 bits (152), Expect(2) = 3e-69
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLE MGF+ +LV+E F AC+KNE+LAANYLL+
Sbjct: 379 VTPEEREAIERLEGMGFDRALVLEVFFACNKNEELAANYLLD 420


>ref|NP_186903.1| UV excision repair protein RAD23C [Arabidopsis thaliana]
           gi|55976503|sp|Q84L31.2|RD23C_ARATH RecName:
           Full=Ubiquitin receptor RAD23c; Short=AtRAD23c; AltName:
           Full=Putative DNA repair protein RAD23-3; AltName:
           Full=RAD23-like protein 3; Short=AtRAD23-3
           gi|6957717|gb|AAF32461.1| putative RAD23 [Arabidopsis
           thaliana] gi|14517454|gb|AAK62617.1| AT3g02540/F16B3_17
           [Arabidopsis thaliana] gi|21360453|gb|AAM47342.1|
           AT3g02540/F16B3_17 [Arabidopsis thaliana]
           gi|30409724|dbj|BAC76392.1| RAD23-like protein
           [Arabidopsis thaliana] gi|110735092|gb|ABG89116.1|
           Rad23-1 [synthetic construct]
           gi|332640303|gb|AEE73824.1| UV excision repair protein
           RAD23C [Arabidopsis thaliana]
          Length = 419

 Score =  223 bits (568), Expect(2) = 3e-69
 Identities = 113/172 (65%), Positives = 136/172 (79%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNL  G++LE TIQQILDMGGGTWDRETVV ALRAA+NNPERA++YLY+GIPE A
Sbjct: 174 YGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQA 233

Query: 260 EIAVPVAHPSSGEAAVSN---QEQNPSAAPSGGPNVAPLNLFPQGAPNIA--TGNGTLDF 424
           E+  PVA P +     +N   Q Q P+AAP+ GPN  PL+LFPQG PN+    G GTLDF
Sbjct: 234 EVP-PVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDF 292

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+++QFQ LR+MVQ NPQ+LQPMLQEL KQNP LM LI+++Q +FL LINE
Sbjct: 293 LRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINE 344



 Score = 66.2 bits (160), Expect(2) = 3e-69
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGFE +LV+E F AC+KNE+LAANYLL+
Sbjct: 371 VTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLD 412


>ref|NP_001189793.1| UV excision repair protein RAD23C [Arabidopsis thaliana]
           gi|332640305|gb|AEE73826.1| UV excision repair protein
           RAD23C [Arabidopsis thaliana]
          Length = 418

 Score =  223 bits (568), Expect(2) = 3e-69
 Identities = 113/172 (65%), Positives = 136/172 (79%), Gaps = 5/172 (2%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNL  G++LE TIQQILDMGGGTWDRETVV ALRAA+NNPERA++YLY+GIPE A
Sbjct: 173 YGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQA 232

Query: 260 EIAVPVAHPSSGEAAVSN---QEQNPSAAPSGGPNVAPLNLFPQGAPNIA--TGNGTLDF 424
           E+  PVA P +     +N   Q Q P+AAP+ GPN  PL+LFPQG PN+    G GTLDF
Sbjct: 233 EVP-PVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDF 291

Query: 425 LRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           LR+++QFQ LR+MVQ NPQ+LQPMLQEL KQNP LM LI+++Q +FL LINE
Sbjct: 292 LRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINE 343



 Score = 66.2 bits (160), Expect(2) = 3e-69
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGFE +LV+E F AC+KNE+LAANYLL+
Sbjct: 370 VTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLD 411


>gb|ABB02636.1| RAD23-like [Solanum tuberosum]
          Length = 384

 Score =  226 bits (577), Expect(2) = 3e-69
 Identities = 116/169 (68%), Positives = 136/169 (80%), Gaps = 2/169 (1%)
 Frame = +2

Query: 80  YAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLYSGIPEVA 259
           Y +AASNLV G++LE T+QQILDMGGG+W+R+TVVRALRAAYNNPERAI+YLYSGIPE A
Sbjct: 148 YGQAASNLVAGSTLETTVQQILDMGGGSWERDTVVRALRAAYNNPERAIEYLYSGIPEQA 207

Query: 260 EIAVPVAHPSSGEAAVSNQEQNPSAAPSGGPNVAPLNLFPQGAPNIAT--GNGTLDFLRD 433
           EI  P A P SG+A     + +P A PSGGPN  PL+LFPQG PN+ +  G G LDFL +
Sbjct: 208 EI--PPAAPVSGQAVNPPVQASPPAVPSGGPNANPLDLFPQGLPNVGSNVGAGNLDFLSN 265

Query: 434 NEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLIEENQEEFLSLINE 580
           + QFQ LR+MVQ NPQILQPMLQEL KQNPQLM LI+E+Q +FL LINE
Sbjct: 266 SPQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINE 314



 Score = 62.8 bits (151), Expect(2) = 3e-69
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +1

Query: 592 VTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYLLE 717
           VT EE  AIERLEAMGF+ +LV++ F AC+KNE++AANYLL+
Sbjct: 336 VTPEEREAIERLEAMGFDRALVLQVFFACNKNEEMAANYLLD 377