BLASTX nr result
ID: Ephedra25_contig00015040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00015040
(542 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001756677.1| predicted protein [Physcomitrella patens] gi... 174 2e-41
ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation spec... 173 2e-41
ref|XP_006650916.1| PREDICTED: cleavage and polyadenylation spec... 173 3e-41
dbj|BAJ86772.1| predicted protein [Hordeum vulgare subsp. vulgare] 172 5e-41
dbj|BAJ85804.1| predicted protein [Hordeum vulgare subsp. vulgare] 172 5e-41
dbj|BAJ89790.1| predicted protein [Hordeum vulgare subsp. vulgare] 172 5e-41
ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation spec... 171 8e-41
ref|NP_001146407.1| uncharacterized protein LOC100279987 [Zea ma... 171 1e-40
gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indi... 171 1e-40
gb|EMT17383.1| Cleavage and polyadenylation specificity factor s... 171 1e-40
ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation spec... 170 2e-40
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec... 170 2e-40
ref|XP_006431753.1| hypothetical protein CICLE_v10000468mg [Citr... 170 2e-40
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr... 170 2e-40
ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citr... 170 2e-40
ref|XP_006431750.1| hypothetical protein CICLE_v10000467mg [Citr... 170 2e-40
ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] g... 169 3e-40
gb|EOX98110.1| Cleavage and polyadenylation specificity factor 7... 169 4e-40
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s... 169 5e-40
ref|XP_001765559.1| predicted protein [Physcomitrella patens] gi... 169 5e-40
>ref|XP_001756677.1| predicted protein [Physcomitrella patens] gi|162692273|gb|EDQ78631.1|
predicted protein [Physcomitrella patens]
Length = 682
Score = 174 bits (440), Expect = 2e-41
Identities = 88/174 (50%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLND-EVPTLNVHGKVMVKQEGAEY 178
TQLSTG++ QR S+PYKG F+VLR+RLQQ+YE VE++ + PTL VHG + V EGA+Y
Sbjct: 507 TQLSTGSVMQRQSVPYKGTFTVLRHRLQQMYEQVEVVTKADSPTLKVHGNLTVTHEGADY 566
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESESSEDKVKDDFKIMKSLLISLFG 358
++LQW+SDPISDMV+DS++ M++ + +S A K++ KI+ SLL+SLFG
Sbjct: 567 VILQWVSDPISDMVADSVVAMILKLDSQSMFAVGGGRAKEARLEKEEIKIVHSLLVSLFG 626
Query: 359 DV--KEEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPI 514
DV EE L V +DG AT+DH ++C+D++LKDRI+ AL R+QTA+ P+
Sbjct: 627 DVTLDEEHQSLTVNVDGIEATIDHVKRGIECKDENLKDRIKVALRRIQTALYPL 680
>ref|XP_003559115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Brachypodium distachyon]
Length = 768
Score = 173 bits (439), Expect = 2e-41
Identities = 88/181 (48%), Positives = 130/181 (71%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ E
Sbjct: 588 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESCPEEPDVPTLIVHERVTIRLESES 647
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKALE--SESSEDKVKDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ M++N E P+ +E ++ E+ K K++ +L++S
Sbjct: 648 YVTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPVEEAEKTQEETEKVARKVVYALMVS 707
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LFGDVK E GK ++++DG VA +D S +V+C++ +LK+RI+ A R+Q A+RPI +SS
Sbjct: 708 LFGDVKVAEGGKFVISVDGDVAHLDGSSGDVECENAALKERIKTAFRRIQGAVRPIPLSS 767
Query: 527 A 529
+
Sbjct: 768 S 768
>ref|XP_006650916.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Oryza brachyantha]
Length = 632
Score = 173 bits (438), Expect = 3e-41
Identities = 87/181 (48%), Positives = 132/181 (72%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VP+L VH +V ++ E
Sbjct: 452 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEESDVPSLIVHERVTIRLESES 511
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ MV+N E P+ +E ++ E+ + K++ +L++S
Sbjct: 512 YVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVS 571
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LFGDVK E+GKL++++DG+VA +D +V+C++ SLK+RI+ A R+Q A+RPI ++S
Sbjct: 572 LFGDVKVAEEGKLVISVDGQVAHLDGRSGDVECENASLKERIKTAFRRIQGAVRPIPLAS 631
Query: 527 A 529
+
Sbjct: 632 S 632
>dbj|BAJ86772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 172 bits (436), Expect = 5e-41
Identities = 86/180 (47%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE-VPTLNVHGKVMVKQEGAEY 178
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ + Y
Sbjct: 525 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEEDVPTLTVHERVAIRLDSESY 584
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLISL 352
+ LQW SDPISDMVSDS++ M++N E P+ +E ++ E+ + K++ +L++SL
Sbjct: 585 VTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSL 644
Query: 353 FGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 529
FGDVK E+GKLI+T+DG A +D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 645 FGDVKVAEEGKLIITVDGDAAHLDGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>dbj|BAJ85804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 172 bits (436), Expect = 5e-41
Identities = 86/180 (47%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE-VPTLNVHGKVMVKQEGAEY 178
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ + Y
Sbjct: 525 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEEDVPTLTVHERVAIRLDSESY 584
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLISL 352
+ LQW SDPISDMVSDS++ M++N E P+ +E ++ E+ + K++ +L++SL
Sbjct: 585 VTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSL 644
Query: 353 FGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 529
FGDVK E+GKLI+T+DG A +D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 645 FGDVKVAEEGKLIITVDGDAAHLDGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>dbj|BAJ89790.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 172 bits (436), Expect = 5e-41
Identities = 86/180 (47%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE-VPTLNVHGKVMVKQEGAEY 178
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ + Y
Sbjct: 525 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEEDVPTLTVHERVAIRLDSESY 584
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLISL 352
+ LQW SDPISDMVSDS++ M++N E P+ +E ++ E+ + K++ +L++SL
Sbjct: 585 VTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPIEEAVKTEEETERVGRKVVYALMVSL 644
Query: 353 FGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 529
FGDVK E+GKLI+T+DG A +D +V+C + LK+RI+ A R+Q A+RPI +S++
Sbjct: 645 FGDVKVAEEGKLIITVDGDAAHLDGRSGDVECANAGLKERIKTAFRRIQGAVRPILLSAS 704
>ref|XP_003560694.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Brachypodium distachyon]
Length = 690
Score = 171 bits (434), Expect = 8e-41
Identities = 87/181 (48%), Positives = 133/181 (73%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST +TQ+I++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ E
Sbjct: 510 TQLSTANVTQQIAVPYSGSFEVIKYRLKQIYESVESCPEEPEVPTLIVHERVTIRLESES 569
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKAL-ESESSEDKV-KDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ M++N E P+ + E+E ++D+ K K++ +L++S
Sbjct: 570 YVTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPVEEAEKTQDETEKVARKVVYALMVS 629
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LF DVK E+GKL++++DG VA +D S +V+C++ +LK+RI+ A R+Q A+RPI +SS
Sbjct: 630 LFADVKVAEEGKLVISVDGDVAHLDGSSGDVECENAALKERIKTAFRRIQGAVRPIPLSS 689
Query: 527 A 529
+
Sbjct: 690 S 690
>ref|NP_001146407.1| uncharacterized protein LOC100279987 [Zea mays]
gi|219887045|gb|ACL53897.1| unknown [Zea mays]
gi|414873991|tpg|DAA52548.1| TPA: hypothetical protein
ZEAMMB73_264007 [Zea mays]
Length = 697
Score = 171 bits (433), Expect = 1e-40
Identities = 87/181 (48%), Positives = 128/181 (70%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST I QRI++PY G+F V+RYRL+Q+YESVE +E VPTL VH +V V+ +
Sbjct: 517 TQLSTANIIQRIAVPYSGSFEVIRYRLKQIYESVESATEESDVPTLIVHERVTVRLDSES 576
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ MV+N E P+ +E ++ E+ K K++ +L+ S
Sbjct: 577 YVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTKEETEKAALKVVYALMTS 636
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LFGDVK E+GK ++++DG VA +D +V+C++ +LK+RI+ A R+Q A+RPI +S+
Sbjct: 637 LFGDVKVAEEGKFVISVDGNVAHLDGRSGDVECENATLKERIKTAFRRIQGAVRPIPLSA 696
Query: 527 A 529
+
Sbjct: 697 S 697
>gb|EAY92623.1| hypothetical protein OsI_14368 [Oryza sativa Indica Group]
Length = 700
Score = 171 bits (433), Expect = 1e-40
Identities = 86/181 (47%), Positives = 131/181 (72%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ E
Sbjct: 520 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESES 579
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ MV+N E P+ +E ++ E+ + K++ +L++S
Sbjct: 580 YVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVS 639
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LFGDVK E+GKL++++DG+VA +D +V+C++ +L++RI+ A R+Q A+RPI + S
Sbjct: 640 LFGDVKVAEEGKLVISVDGQVAHLDGRSGDVECENATLRERIKTAFRRIQGAVRPIPLIS 699
Query: 527 A 529
+
Sbjct: 700 S 700
>gb|EMT17383.1| Cleavage and polyadenylation specificity factor subunit 3 [Aegilops
tauschii]
Length = 720
Score = 171 bits (432), Expect = 1e-40
Identities = 86/180 (47%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE-VPTLNVHGKVMVKQEGAEY 178
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VP L VH +V ++ + Y
Sbjct: 541 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEEDVPVLTVHERVAIRLDSESY 600
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLISL 352
+ LQW SDPISDMVSDS++ M++N E P+ +E ++ E+ K K++ SL++SL
Sbjct: 601 VTLQWSSDPISDMVSDSVVAMILNIGREGPKVVPIEEAVKTEEETEKVARKVVYSLMVSL 660
Query: 353 FGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSSA 529
FGDVK E+GKL++T+DG VA +D +V+ ++ LK+RI+ A R+Q A+RPI +S++
Sbjct: 661 FGDVKVAEEGKLVITVDGDVAHLDGRSGDVESENAGLKERIKTAFRRIQGAVRPIPLSAS 720
>ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X2 [Citrus sinensis]
Length = 629
Score = 170 bits (430), Expect = 2e-40
Identities = 88/183 (48%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI+IPY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 448 SQLSTANITQRITIPYSGAFGVMKYRLEQIYESVESSTDEESGVPTLQVHDRVTLKQDSE 507
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDS++ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 508 KHISMCWTSDPISDMVSDSVVALVLNINQEVPKL-VVESEAIKSEEESGKKAEKVIHALL 566
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDV+ E+GKL++ +DG VA +D +V+ +++ LK++++ A R+Q+A++PI +
Sbjct: 567 VSLFGDVQLGENGKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPL 626
Query: 521 SSA 529
S++
Sbjct: 627 SAS 629
>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 170 bits (430), Expect = 2e-40
Identities = 88/183 (48%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI+IPY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 513 SQLSTANITQRITIPYSGAFGVMKYRLEQIYESVESSTDEESGVPTLQVHDRVTLKQDSE 572
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDS++ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 573 KHISMCWTSDPISDMVSDSVVALVLNINQEVPKL-VVESEAIKSEEESGKKAEKVIHALL 631
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDV+ E+GKL++ +DG VA +D +V+ +++ LK++++ A R+Q+A++PI +
Sbjct: 632 VSLFGDVQLGENGKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPL 691
Query: 521 SSA 529
S++
Sbjct: 692 SAS 694
>ref|XP_006431753.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533875|gb|ESR44993.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 588
Score = 170 bits (430), Expect = 2e-40
Identities = 87/182 (47%), Positives = 131/182 (71%), Gaps = 7/182 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI++PY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 407 SQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSE 466
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDS++ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 467 KHISMHWTSDPISDMVSDSVVALVLNINREVPKV-VVESEAIKSEEESGKKAEKVIHALL 525
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDVK ++GK+++ +DG VA +D +V+ +++ LK+R++ A R+Q A++PI +
Sbjct: 526 VSLFGDVKLGDNGKVVINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPL 585
Query: 521 SS 526
S+
Sbjct: 586 SA 587
>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533874|gb|ESR44992.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 694
Score = 170 bits (430), Expect = 2e-40
Identities = 87/182 (47%), Positives = 131/182 (71%), Gaps = 7/182 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI++PY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 513 SQLSTANITQRITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSE 572
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDS++ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 573 KHISMHWTSDPISDMVSDSVVALVLNINREVPKV-VVESEAIKSEEESGKKAEKVIHALL 631
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDVK ++GK+++ +DG VA +D +V+ +++ LK+R++ A R+Q A++PI +
Sbjct: 632 VSLFGDVKLGDNGKVVINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPL 691
Query: 521 SS 526
S+
Sbjct: 692 SA 693
>ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
gi|557533873|gb|ESR44991.1| hypothetical protein
CICLE_v10000467mg [Citrus clementina]
Length = 694
Score = 170 bits (430), Expect = 2e-40
Identities = 88/183 (48%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI+IPY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 513 SQLSTTNITQRITIPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSE 572
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDSI+ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 573 KHISMHWTSDPISDMVSDSIVALVLNINREVPKV-VVESEAIKSEEESGKKAEKVIHALL 631
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDVK ++GKL++ +DG VA +D +V+ +++ LK++++ A R+Q+A++PI +
Sbjct: 632 VSLFGDVKLGDNGKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPL 691
Query: 521 SSA 529
+++
Sbjct: 692 AAS 694
>ref|XP_006431750.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
gi|557533872|gb|ESR44990.1| hypothetical protein
CICLE_v10000467mg [Citrus clementina]
Length = 588
Score = 170 bits (430), Expect = 2e-40
Identities = 88/183 (48%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI+IPY GAF V++YRL+Q+YESVE DE VPTL VH +V +KQ+
Sbjct: 407 SQLSTTNITQRITIPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSE 466
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESE---SSEDKVKDDFKIMKSLL 343
++I + W SDPISDMVSDSI+ +V+N N E P+ +ESE S E+ K K++ +LL
Sbjct: 467 KHISMHWTSDPISDMVSDSIVALVLNINREVPKV-VVESEAIKSEEESGKKAEKVIHALL 525
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDVK ++GKL++ +DG VA +D +V+ +++ LK++++ A R+Q+A++PI +
Sbjct: 526 VSLFGDVKLGDNGKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPL 585
Query: 521 SSA 529
+++
Sbjct: 586 AAS 588
>ref|NP_001051928.1| Os03g0852900 [Oryza sativa Japonica Group] gi|27573349|gb|AAO20067.1|
putative cleavage and polyadenylation specifity factor
protein [Oryza sativa Japonica Group]
gi|29126360|gb|AAO66552.1| putative cleavage and
polyadenylation specifity factor [Oryza sativa Japonica
Group] gi|108712151|gb|ABF99946.1| Cleavage and
polyadenylation specificity factor, 73 kDa subunit,
putative, expressed [Oryza sativa Japonica Group]
gi|113550399|dbj|BAF13842.1| Os03g0852900 [Oryza sativa
Japonica Group] gi|125588676|gb|EAZ29340.1| hypothetical
protein OsJ_13407 [Oryza sativa Japonica Group]
Length = 700
Score = 169 bits (429), Expect = 3e-40
Identities = 86/181 (47%), Positives = 130/181 (71%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE--VPTLNVHGKVMVKQEGAE 175
TQLST ITQRI++PY G+F V++YRL+Q+YESVE +E VPTL VH +V ++ E
Sbjct: 520 TQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVESSTEESDVPTLIVHERVTIRLESES 579
Query: 176 YILLQWISDPISDMVSDSIITMVMNFNPESPRAKALES--ESSEDKVKDDFKIMKSLLIS 349
Y+ LQW SDPISDMVSDS++ MV+N E P+ +E ++ E+ + K++ +L++S
Sbjct: 580 YVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVVPVEEAVKTQEETERVAQKVVYALMVS 639
Query: 350 LFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMSS 526
LFGDVK E+GKL++++DG+VA +D V+C++ +L++RI+ A R+Q A+RPI + S
Sbjct: 640 LFGDVKVAEEGKLVISVDGQVAHLDGRSGGVECENATLRERIKTAFRRIQGAVRPIPLIS 699
Query: 527 A 529
+
Sbjct: 700 S 700
>gb|EOX98110.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
cacao]
Length = 694
Score = 169 bits (428), Expect = 4e-40
Identities = 89/183 (48%), Positives = 134/183 (73%), Gaps = 7/183 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QLST ITQRI+IP+ GAF V+++RL+Q+YESVE DE VPTL VH +V VKQ+
Sbjct: 513 SQLSTANITQRITIPFAGAFGVIKHRLEQIYESVESSTDEESGVPTLRVHDRVTVKQDSD 572
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESES---SEDKVKDDFKIMKSLL 343
++I L W SDPISDMVSDSI+ +V+N + E P+ +ESE+ E+ K K++ +LL
Sbjct: 573 KHISLHWTSDPISDMVSDSIVALVLNISREIPKV-VVESEAVKMEEENGKKAEKVIHALL 631
Query: 344 ISLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRM 520
+SLFGDVK E+GKL++++DG VA +D +V+ +++ LK+R++ A R+Q+A++PI +
Sbjct: 632 VSLFGDVKLGENGKLMISVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPL 691
Query: 521 SSA 529
S++
Sbjct: 692 SAS 694
>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
notabilis]
Length = 693
Score = 169 bits (427), Expect = 5e-40
Identities = 85/182 (46%), Positives = 132/182 (72%), Gaps = 6/182 (3%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEMLNDE---VPTLNVHGKVMVKQEGA 172
+QL+T ITQRI+IPY AFSV+++RL+Q+Y+SVE DE VPTL VH +V VK E
Sbjct: 512 SQLATANITQRITIPYSSAFSVIKHRLKQIYDSVESSTDEESGVPTLRVHDRVTVKHESD 571
Query: 173 EYILLQWISDPISDMVSDSIITMVMNFNPESPR--AKALESESSEDKVKDDFKIMKSLLI 346
++I L W SDPISDMVSDS++ +V+N N E P+ ++ ++++ ED K K++ +LL+
Sbjct: 572 KHISLHWTSDPISDMVSDSVVALVLNINREVPKVVVESEDTKTEEDNEKKAEKVIYALLV 631
Query: 347 SLFGDVK-EEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPIRMS 523
SLFGDVK +GK+++ +DG VA +D +V+ +++ LK+R++ A R+Q+A++PI +S
Sbjct: 632 SLFGDVKLRGNGKIMINVDGNVAQLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLS 691
Query: 524 SA 529
S+
Sbjct: 692 SS 693
>ref|XP_001765559.1| predicted protein [Physcomitrella patens] gi|162683197|gb|EDQ69609.1|
predicted protein [Physcomitrella patens]
Length = 682
Score = 169 bits (427), Expect = 5e-40
Identities = 86/174 (49%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 TQLSTGAITQRISIPYKGAFSVLRYRLQQLYESVEML-NDEVPTLNVHGKVMVKQEGAEY 178
TQLSTG++ QR S+PYKG F VLR+RLQQ+YE VE + + P L VHG + + EGA+
Sbjct: 507 TQLSTGSVMQRQSVPYKGTFIVLRHRLQQMYEQVEAVAKADSPILKVHGNLTITHEGADQ 566
Query: 179 ILLQWISDPISDMVSDSIITMVMNFNPESPRAKALESESSEDKVKDDFKIMKSLLISLFG 358
++LQW+SDPISDMV+DS++ M++ + +S A E K++ KI+ SLL+SLFG
Sbjct: 567 VILQWVSDPISDMVADSVVAMILKLDSQSMFAVGGERSKETRLEKNEIKIVHSLLVSLFG 626
Query: 359 DV--KEEDGKLIVTMDGKVATVDHSCTEVDCQDDSLKDRIQNALNRMQTAIRPI 514
DV E+ L V +DG VATVDH ++C+D++LK+RI+ AL R+QTA+ P+
Sbjct: 627 DVTLDEKQQTLTVNVDGTVATVDHVKKGIECKDENLKERIKVALRRIQTALYPL 680