BLASTX nr result
ID: Ephedra25_contig00014719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00014719
(424 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A... 64 3e-08
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 63 4e-08
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 60 2e-07
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-07
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 60 3e-07
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
emb|CBI16896.3| unnamed protein product [Vitis vinifera] 57 2e-06
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera] 57 3e-06
gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus pe... 55 7e-06
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis] 55 1e-05
ref|XP_006373506.1| pentatricopeptide repeat-containing family p... 55 1e-05
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-05
ref|XP_002329308.1| predicted protein [Populus trichocarpa] 55 1e-05
>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
gi|548855973|gb|ERN13836.1| hypothetical protein
AMTR_s00049p00223850 [Amborella trichopoda]
Length = 570
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = -3
Query: 323 NQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTL--NPGKALSFYEWXXXXXXXX 153
N+ + +L + EW E KL+ + +S++ + L+ + +P KAL FY W
Sbjct: 145 NEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFR 204
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YN+++ VL + ++ + FW +EMKE GF M+ ++ + + +FQK
Sbjct: 205 HSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQK 254
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Frame = -3
Query: 317 VLNILKEKEWCNETVEKLNGISDI-SEAHVASALKTLN--PGKALSFYEWXXXXXXXXXX 147
V+ I+ E+EW E +KL G+ + ++ V LK L P KAL F++W
Sbjct: 62 VVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHN 121
Query: 146 XSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNA++ VL + ++ FW +EMK G+ M+ +T + + +FQK
Sbjct: 122 TVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQK 169
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = -3
Query: 317 VLNILKEKEWCNETVEKLNGISDI-SEAHVASALKTLN--PGKALSFYEWXXXXXXXXXX 147
V++++ EW NE ++L G+ + ++ V LK L P KAL F+ W
Sbjct: 203 VVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECN 262
Query: 146 XSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNA+ VL + ++ FW EEMK G M+ +T + + +FQK
Sbjct: 263 TITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQK 310
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = -3
Query: 323 NQVLNILKEKEWCNETVEKLNGISDI-SEAHVASALKTLN--PGKALSFYEWXXXXXXXX 153
+ ++ +L +W E +L S + + V LK L+ P KA F+ W
Sbjct: 64 SSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCDRNGFK 123
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
+Y+ ML +L KK++ +NFW +MKE GF + T L+++ F+K
Sbjct: 124 PSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRK 173
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = -3
Query: 317 VLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXXXX 147
+++++ +W ++ +KL + ++S+ V + LK L P KAL F+ W
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 146 XSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YN +L VL++ + ++FW EEMK+ G+ M+ +T + + +FQK
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = -3
Query: 317 VLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXXXX 147
+++++ +W ++ +KL + ++S+ V + LK L P KAL F+ W
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 146 XSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YN +L VL++ + ++FW EEMK+ G+ M+ +T + + +FQK
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 323 NQVLNILKEKEWCNETVEKL-NGISDISEAHVASALKTL--NPGKALSFYEWXXXXXXXX 153
+ +L ++ +W + +L N S ++ V LK L NP KA SF+ W
Sbjct: 67 HSILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRLDKNPEKAFSFFNWVSKKEWFM 126
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
SVY+ ++ VL+ + T + FW MKE GF ++ T L++ + F+K
Sbjct: 127 ASSSVYSLIIRVLANQETMKQFWITLRTMKEKGFYLDEETYLTISVGFKK 176
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = -3
Query: 317 VLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXXXX 147
V+ I+ EW ++ KL+ + +S+ V LK L P KA F++W
Sbjct: 206 VVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNCPLKAYKFFQWVGKQSSYQLN 265
Query: 146 XSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNA+ VL+K ++ + FW EEMK G ++ +T + + + QK
Sbjct: 266 TVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYIKISRQLQK 313
>emb|CBI16896.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = -3
Query: 353 SVAEAEVQETNQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFY 183
SV ++ + ++V I++ + W + +L+ + S VA L+ L P KAL F+
Sbjct: 211 SVDDSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFF 270
Query: 182 EWXXXXXXXXXXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
W YNAML VL +++ + FWK A+EM+ G+ ME T V+ +F K
Sbjct: 271 RWVEESDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYK 330
>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = -3
Query: 353 SVAEAEVQETNQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFY 183
SV ++ + ++V I++ + W + +L+ + S VA L+ L P KAL F+
Sbjct: 211 SVDDSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFF 270
Query: 182 EWXXXXXXXXXXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
W YNAML VL +++ + FWK A+EM+ G+ ME T V+ +F K
Sbjct: 271 RWVEESDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYK 330
>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Brachypodium distachyon]
Length = 585
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = -3
Query: 296 KEWCNETVEK-LNGIS---DISEAHVASALKTLN--PGKALSFYEWXXXXXXXXXXXSVY 135
+E +E +EK L G+ ++E VA L+ L P KAL F+ W Y
Sbjct: 164 EEGSDEALEKRLEGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAY 223
Query: 134 NAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
NAM VL ++ + Q FW+ +EMK G ++ +T + + +FQK
Sbjct: 224 NAMARVLGREESVQEFWELIQEMKADGIYLDIDTYVKLNRQFQK 267
>dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Frame = -3
Query: 281 ETVEKLNGISD----ISEAHVASALKTLN--PGKALSFYEWXXXXXXXXXXXSVYNAMLS 120
E KL G+++ ++EA VA L+ P KAL+F+ W YNAM
Sbjct: 176 ELERKLEGVAEQLMPLTEAAVAGVLREARDVPSKALAFFRWAGRQRGYEHGSVAYNAMAR 235
Query: 119 VLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
VL ++++ + FW+ +EMK G ++ +T + + +FQK
Sbjct: 236 VLGREDSLREFWELVQEMKAGGVHVDIDTYMKLSRQFQK 274
>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
Length = 650
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 323 NQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXX 153
++V I++ + W + +L+ + S VA L+ L P KAL F+ W
Sbjct: 221 SRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLXK 280
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNAML VL +++ + FWK A+EM+ G+ ME T V+ +F K
Sbjct: 281 HDKXTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYXKVVGRFYK 330
>gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus persica]
Length = 675
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 323 NQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXX 153
++V I++ + W + K+ ++ +S V L+ L+ P KAL F+ W
Sbjct: 230 SRVCKIVRNEVWSGDVERKILDLNVALSSDMVKVVLENLSTEPMKALIFFRWMEESGFLK 289
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNAM VL +++ FWK +EM+ +G+ +E T + V+ +F K
Sbjct: 290 HDQQTYNAMARVLGREDCKDRFWKVVDEMRSNGYELELETYVKVLGRFCK 339
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -3
Query: 320 QVLNILKEKEWCNETVEKL----NGISDISEAHVASALKTLNPGKALSFYEWXXXXXXXX 153
+V+ ++ W +E +KL N SD HV L+ P KAL F++W
Sbjct: 204 KVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGY-PLKALRFFQWVGECPGYE 262
Query: 152 XXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YN + VL + ++ FW EEMK G M+ +T + + +FQK
Sbjct: 263 HSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQK 312
>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
Length = 628
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = -3
Query: 320 QVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXXXXXX 150
+V++++ +W +E ++L I D+S+ V LK L P KA SF+ W
Sbjct: 203 KVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEH 262
Query: 149 XXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNA VLS+ ++ FW EEMK G+ ++ + + + +FQK
Sbjct: 263 NSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQK 311
>ref|XP_006373506.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320328|gb|ERP51303.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 658
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = -3
Query: 308 ILKEKEWCNETVEKLNGIS-DISEAHVASALKTL--NPGKALSFYEWXXXXXXXXXXXSV 138
I++ K W + ++ G+S + S V L+ L P KAL F+ W
Sbjct: 230 IVRSKFWGEDVEGEIKGLSAEFSSGLVKIVLEHLAMEPMKALIFFRWVEESELCKHDGGS 289
Query: 137 YNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNAM VL K+ FWK +EM+ +GF ME T +V+ F +
Sbjct: 290 YNAMARVLGSKDCIDRFWKVIDEMRSNGFEMEVETFDTVLAWFMR 334
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = -3
Query: 332 QETNQVLNILKEKEWCNETVEKLNGIS-DISEAHVASALKTLN--PGKALSFYEWXXXXX 162
++ +V++++ EW ++ ++L I ++SE V L+ L P KAL F+ W
Sbjct: 199 EDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCA 258
Query: 161 XXXXXXSVYNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YN M VL + ++ FW EEMK G ++ +T + + +FQK
Sbjct: 259 GYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQK 311
>ref|XP_002329308.1| predicted protein [Populus trichocarpa]
Length = 658
Score = 55.1 bits (131), Expect = 1e-05
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = -3
Query: 308 ILKEKEWCNETVEKLNGIS-DISEAHVASALKTL--NPGKALSFYEWXXXXXXXXXXXSV 138
I++ K W + ++ G+S + S V L+ L P KAL F+ W
Sbjct: 230 IVRSKFWGEDVEGEIKGLSAEFSSGLVKIVLEHLAIEPMKALIFFRWVEESELCKHDGGS 289
Query: 137 YNAMLSVLSKKNTSQNFWKFAEEMKEHGFLMERNTLLSVMMKFQK 3
YNAM VL K+ FWK +EM+ +GF ME T +V+ F +
Sbjct: 290 YNAMARVLGSKDCIDRFWKVIDEMRSNGFEMEVETFDTVLAWFMR 334