BLASTX nr result

ID: Ephedra25_contig00014370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00014370
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24359.1| unknown [Picea sitchensis]                              64   3e-08
gb|ACA04857.1| putative copine I [Picea abies]                         62   8e-08
ref|XP_004304674.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    59   5e-07
gb|AAX20031.1| RING-finger protein [Capsicum annuum]                   59   7e-07
gb|AGL95792.1| RING-finger protein [Nicotiana tabacum]                 56   4e-06

>gb|ABK24359.1| unknown [Picea sitchensis]
          Length = 423

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/41 (78%), Positives = 33/41 (80%)
 Frame = +1

Query: 325 PSPPQPPAAKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 447
           P     PAAK KLQRRYSRIADNYNSLDEVT  LAQ+GLES
Sbjct: 38  PETYSQPAAKQKLQRRYSRIADNYNSLDEVTAALAQAGLES 78


>gb|ACA04857.1| putative copine I [Picea abies]
          Length = 220

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/93 (44%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +1

Query: 187 KRYRMGGRQSKSTRRXXXXXXXXXXXXXXXXXXXXXXXXXXXQNWYPSPP------QPPA 348
           KR  MGG+ SK  R                             ++YPS          P 
Sbjct: 14  KRLAMGGKHSKGLR---------WKRPSYSSSSYGPSPAWNSSSYYPSSAVISETYTQPV 64

Query: 349 AKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 447
           AK+KLQRRYSRIADNYNSLDEVT  LAQ+GLES
Sbjct: 65  AKNKLQRRYSRIADNYNSLDEVTAALAQAGLES 97


>ref|XP_004304674.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Fragaria vesca
           subsp. vesca]
          Length = 483

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +1

Query: 322 YPSPPQPP-AAKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 447
           Y SPP P    K KL RRYSRIADNYNSL+EVT+ LA++GLES
Sbjct: 74  YSSPPPPDYGGKRKLDRRYSRIADNYNSLEEVTEALARAGLES 116


>gb|AAX20031.1| RING-finger protein [Capsicum annuum]
          Length = 484

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 4/48 (8%)
 Frame = +1

Query: 316 NWYPSPPQPPAAKH----KLQRRYSRIADNYNSLDEVTKDLAQSGLES 447
           ++ P+PPQ   A H    +L RRYSRIADNYNSLDEVT+ LA++GLES
Sbjct: 65  SYAPAPPQQNYASHASRPRLDRRYSRIADNYNSLDEVTEALARAGLES 112


>gb|AGL95792.1| RING-finger protein [Nicotiana tabacum]
          Length = 486

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = +1

Query: 313 QNWYPSPPQPP-----AAKHKLQRRYSRIADNYNSLDEVTKDLAQSGLES 447
           QN+ P PPQ         K +L RRYSRIADNY+SLDEVT+ LA+ GLES
Sbjct: 61  QNYPPPPPQQQNYPSHVPKPRLDRRYSRIADNYSSLDEVTEALAREGLES 110


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