BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00014266
         (1113 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001008646.1| Bifunctional endo-1,4-beta-xylanase xylA pre...    60   2e-06
ref|XP_638677.1| RNA-binding region RNP-1 domain-containing prot...    59   3e-06

>ref|XP_001008646.1| Bifunctional endo-1,4-beta-xylanase xylA precursor, putative
           [Tetrahymena thermophila] gi|89290413|gb|EAR88401.1|
           hypothetical protein TTHERM_00163920 [Tetrahymena
           thermophila SB210]
          Length = 449

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
 Frame = -2

Query: 764 NNKNGQRMR----GAINQPDHHARPENNFHPNKFQSNNVHHKFPGKHF-SQRNFEKNFNQ 600
           NN NGQ  +    G  NQ +++ +  NN + N  Q+N  H+   G++  +  N + N N 
Sbjct: 203 NNNNGQNNQNNNNGQNNQNNNNGQNNNNNNNNNNQNNQNHNNNNGQNNQNNNNGQNNQNN 262

Query: 599 RRPQNYIDPRVSADNDNAEKNGKANVSENNVST-----NMAENNGNTSMAEINENADCTN 435
              QN      + DN N + N K N S+NN +      N   NN N S    N N    N
Sbjct: 263 NNGQN----NNNQDNKNDQNNQKNNNSQNNQNNSNNNQNNQNNNNNNSQNNQNNNNGQNN 318

Query: 434 ENTNMAEIIDNADCANDSEGGASCRQGQKGHKN 336
           +N N  +  +N D  N+++   + ++   G  N
Sbjct: 319 QNNNNGQNNNNQDNKNNNKNDQNNQKNNNGQNN 351



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 8/187 (4%)
 Frame = -2

Query: 764 NNKNGQRMRGAINQPDHHARPENNFHPNKFQSNNVHHKFPGKHFSQRNFEKNFNQRRPQN 585
           NN NGQ      N+ D + +  NN   N+  SNN  +     + + +N + N N +  QN
Sbjct: 261 NNNNGQNNNNQDNKNDQNNQKNNNSQNNQNNSNNNQNNQNNNNNNSQNNQNNNNGQNNQN 320

Query: 584 YIDPR--VSADNDNAEKNGKANVSENNVSTNMAENNGNTSMAE------INENADCTNEN 429
             + +   + DN N  KN + N   NN   N   NN N + ++       N+N    N+N
Sbjct: 321 NNNGQNNNNQDNKNNNKNDQNNQKNNNGQNNQNNNNNNNNNSDNQNNQNNNKNNGQNNQN 380

Query: 428 TNMAEIIDNADCANDSEGGASCRQGQKGHKNWKXXXXXXXXXXXNVQHSFENGEKVGKRK 249
            N  +   N +   +++   + +  Q  H + +              +   NG +    +
Sbjct: 381 NNNGQNNQNNNNGQNNQNNNNGQNNQNNHNDGQNKGQNNQNNNNQQNNQNNNGNQQQNNQ 440

Query: 248 NKFSANG 228
           N  + NG
Sbjct: 441 NNNNKNG 447


>ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
           discoideum AX4] gi|60467316|gb|EAL65349.1| RNA-binding
           region RNP-1 domain-containing protein [Dictyostelium
           discoideum AX4]
          Length = 892

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 8/217 (3%)
 Frame = -2

Query: 833 LKMEGEEAVVPSVKSKTFHPRIPNNKNG-QRMRGAINQPDHHARPENNFHPNKFQSNNVH 657
           + ++G++A++ +V  +      PNN+N  + +    N  + + +  NN + N   SNN+ 
Sbjct: 41  MNIQGQQAIMGAVNQELISE--PNNRNNSETLNNNNNNNNKNNKKNNNNNNNNSSSNNIK 98

Query: 656 HKFPGKH-----FSQRNFE--KNFNQRRPQNYIDPRVSADNDNAEKNGKANVSENNVSTN 498
                K+      S+ +FE  +N N+ +  N  D +   +NDN   N   N + NN + N
Sbjct: 99  ETDGNKNDVENEISEVDFEGSENENENKNTNQNDIKNENENDNNNNNNNNNNNNNNNNNN 158

Query: 497 MAENNGNTSMAEINENADCTNENTNMAEIIDNADCANDSEGGASCRQGQKGHKNWKXXXX 318
              NN N +    N N    NEN N  E  +  +  N++E         +  K+ +    
Sbjct: 159 NNNNNNNNNNNNNNNNNSNENENENENENENENENENENENAKENENENEKEKDNEDNKE 218

Query: 317 XXXXXXXNVQHSFENGEKVGKRKNKFSANGASHGYSN 207
                   +++  E+        N  + N  ++  +N
Sbjct: 219 SKTSPPQKIKNLDESNNNSNSNSNSNNNNNNNNNNNN 255