BLASTX nr result
ID: Ephedra25_contig00014212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00014212
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006391822.1| hypothetical protein EUTSA_v10023344mg [Eutr... 110 1e-22
emb|CAZ44328.1| restoring pentatricopeptide repeat protein homol... 107 2e-21
ref|XP_004296029.1| PREDICTED: putative pentatricopeptide repeat... 107 2e-21
emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus... 107 2e-21
gb|ACM24117.1| PPR protein [Raphanus sativus] 107 2e-21
gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raph... 107 2e-21
ref|XP_003594869.1| Pentatricopeptide repeat-containing protein ... 106 4e-21
ref|XP_006300878.1| hypothetical protein CARUB_v10019968mg [Caps... 105 5e-21
ref|XP_006300877.1| hypothetical protein CARUB_v10019968mg [Caps... 105 5e-21
ref|XP_002309562.1| predicted protein [Populus trichocarpa] 105 6e-21
ref|XP_003600422.1| Pentatricopeptide repeat-containing protein ... 105 6e-21
ref|XP_002319940.2| hypothetical protein POPTR_0013s14640g [Popu... 105 8e-21
ref|XP_003620118.1| Pentatricopeptide repeat protein-like protei... 104 1e-20
ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arab... 104 1e-20
ref|XP_006442356.1| hypothetical protein CICLE_v10024500mg [Citr... 104 1e-20
ref|XP_006382722.1| helicase domain-containing family protein [P... 104 1e-20
ref|XP_006382084.1| hypothetical protein POPTR_0006s27340g [Popu... 104 1e-20
ref|XP_006828912.1| hypothetical protein AMTR_s00001p00203780 [A... 104 1e-20
ref|XP_006300886.1| hypothetical protein CARUB_v10019976mg [Caps... 104 1e-20
ref|XP_002338159.1| predicted protein [Populus trichocarpa] 104 1e-20
>ref|XP_006391822.1| hypothetical protein EUTSA_v10023344mg [Eutrema salsugineum]
gi|557088328|gb|ESQ29108.1| hypothetical protein
EUTSA_v10023344mg [Eutrema salsugineum]
Length = 633
Score = 110 bits (276), Expect = 1e-22
Identities = 57/132 (43%), Positives = 86/132 (65%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L S M+ K + PDVVT+N +ID L K G++ EAE ++ +M R+V PNT TY+SL++G
Sbjct: 315 RLLSDMIKRK-LNPDVVTFNALIDALVKEGKLLEAEELYKEMIERSVTPNTITYNSLING 373
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR 361
C H LDEA +++ MV K+ + PD+VT N+LI+G CK+ R D ++F EM + +
Sbjct: 374 FCMHDRLDEAERMFELMVSKDSL-PDIVTCNTLINGLCKSKRVEDGRELFREMSQRGLVA 432
Query: 362 DSWIYCCLNKPF 397
D+ Y L + F
Sbjct: 433 DTITYTTLMQGF 444
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/102 (42%), Positives = 70/102 (68%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I P+VV YN +IDGLCK + EA ++F++M+++ + PN TY+SL+ LC +G +
Sbjct: 255 IKPNVVIYNTVIDGLCKYRDVNEALDLFNEMENKGIKPNVITYNSLISCLCNYGRWSDTS 314
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L S+M +K ++ PDVVT+N+LID K + +AE+++ EM
Sbjct: 315 RLLSDM-IKRKLNPDVVTFNALIDALVKEGKLLEAEELYKEM 355
Score = 93.2 bits (230), Expect = 3e-17
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
+K I P+V+TYN +I LC GR + + SDM R + P+ T+++L+D L K G L
Sbjct: 287 NKGIKPNVITYNSLISCLCNYGRWSDTSRLLSDMIKRKLNPDVVTFNALIDALVKEGKLL 346
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRD 364
EA +LY EM ++ +TP+ +TYNSLI+G C +R +AE++F M L D
Sbjct: 347 EAEELYKEM-IERSVTPNTITYNSLINGFCMHDRLDEAERMFELMVSKDSLPD 398
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/108 (38%), Positives = 70/108 (64%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PD++TY +I+G+CK G + A N+ +++ + PN Y++++DGLCK+ ++E
Sbjct: 218 KGCQPDLLTYGAVINGICKRGSMDLALNLLKKLEAEKIKPNVVIYNTVIDGLCKYRDVNE 277
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
A+ L++EM K I P+V+TYNSLI C R+SD ++ ++M K K
Sbjct: 278 ALDLFNEMENK-GIKPNVITYNSLISCLCNYGRWSDTSRLLSDMIKRK 324
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/108 (36%), Positives = 67/108 (62%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PD+VT N +I+GLCK R+ + +F +M R ++ +T TY++L+ G + G D
Sbjct: 393 KDSLPDIVTCNTLINGLCKSKRVEDGRELFREMSQRGLVADTITYTTLMQGFFQAGDCDN 452
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
A +++ +M V + + D+VTYN+L+DG C + +A IF +M K++
Sbjct: 453 AQEVFKQM-VSDGVPRDIVTYNTLLDGLCNNEKLENALFIFQDMQKSE 499
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/111 (34%), Positives = 66/111 (59%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D+VTYN ++DGLC ++ A +F DMQ + + TY+ ++ G CK G +++A +L+
Sbjct: 468 DIVTYNTLLDGLCNNEKLENALFIFQDMQKSEIELDIATYNIIIHGKCKAGEIEDAQELF 527
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
+ +K + PDV+TYN++I G C ++A+ +F EM ++ S Y
Sbjct: 528 CSLRLK-GLQPDVITYNTMISGLCSKRLLNEADALFREMKEDGPKPSSGTY 577
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/107 (32%), Positives = 60/107 (56%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ + + D +TY ++ G + G A+ +F M S V + TY++L+DGLC +
Sbjct: 425 MSQRGLVADTITYTTLMQGFFQAGDCDNAQEVFKQMVSDGVPRDIVTYNTLLDGLCNNEK 484
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
L+ A+ ++ +M K EI D+ TYN +I G CKA DA+++F +
Sbjct: 485 LENALFIFQDM-QKSEIELDIATYNIIIHGKCKAGEIEDAQELFCSL 530
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/103 (33%), Positives = 57/103 (55%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D+ TYN II G CK G I +A+ +F ++ + + P+ TY++++ GLC L+EA L+
Sbjct: 503 DIATYNIIIHGKCKAGEIEDAQELFCSLRLKGLQPDVITYNTMISGLCSKRLLNEADALF 562
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
EM ++ P TYN+LI K + + ++ EM K
Sbjct: 563 REM-KEDGPKPSSGTYNTLIRVHLKNGDKTASSELIKEMRSCK 604
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 35/146 (23%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSD-------------------------------- 124
PD+VT+N +++G C RI +A ++
Sbjct: 152 PDLVTFNSLLNGFCHGNRISDAVSLLDQMVELGYKPDTVTFTTLIHGLFLNNKVSEAVAL 211
Query: 125 ---MQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCC 295
M ++ P+ TY ++++G+CK G +D A+ L ++ E+I P+VV YN++IDG C
Sbjct: 212 VDRMAAKGCQPDLLTYGAVINGICKRGSMDLALNLLKKLEA-EKIKPNVVIYNTVIDGLC 270
Query: 296 KANRFSDAEKIFAEMHKNKELRDSWI 373
K ++A +F EM +NK ++ + I
Sbjct: 271 KYRDVNEALDLFNEM-ENKGIKPNVI 295
>emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 107 bits (267), Expect = 2e-21
Identities = 53/123 (43%), Positives = 76/123 (61%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV TYN +I GL G+ EAE ++ +M R ++PNT TYSS+++GLCK LDEA
Sbjct: 501 VEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEAT 560
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+++ M K +PDVVT+N+L+ G CKA R D ++F EM + + D+ Y L
Sbjct: 561 QMFDSMGSK-SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619
Query: 395 FAK 403
F K
Sbjct: 620 FRK 622
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/103 (42%), Positives = 71/103 (68%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
HI P+VV Y+ IIDGL K GR +A N++++MQ + + P+ +TY+ ++DG C G EA
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEA 303
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L EM ++ +I P+VVTY++LI+ K +F +AE+++ EM
Sbjct: 304 QRLLQEM-LERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = +2
Query: 14 TMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKH 193
T + K I PD+ TYN +IDG C GR EA+ + +M R + PN TYS+L++ K
Sbjct: 273 TEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKE 332
Query: 194 GFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EA +LY EM+ + I P+ +TYNS+IDG CK NR AE +F M
Sbjct: 333 RKFFEAEELYDEMLPR-GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVM 380
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/125 (39%), Positives = 73/125 (58%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L ML K I P+VVTY+ +I+ K + EAE ++ +M R ++PNT TY+S++DG
Sbjct: 305 RLLQEMLERK-INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR 361
CK LD A ++ M K +PDV T+N+LIDG C A R D ++ EM + +
Sbjct: 364 FCKQNRLDAAEHMFYVMATK-GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422
Query: 362 DSWIY 376
D+ Y
Sbjct: 423 DTTTY 427
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/122 (36%), Positives = 69/122 (56%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
L H+ P+VVT+ +++GLC+ GR+ EA + M + PN TY ++VDG+CK G
Sbjct: 169 LFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYC 379
A+ L +M I P+VV Y+++IDG K R SDA ++ EM + D + Y
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288
Query: 380 CL 385
C+
Sbjct: 289 CM 290
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRN-VLPNTWTYSSLVDGLCKHGFLDEA 211
+ P+ +TY I+DG+CK+G A N+ M+ + + PN YS+++DGL K G +A
Sbjct: 209 LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDA 268
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNK 391
LY+EM K I PD+ TYN +IDG C + R+S+A+++ EM + K + Y L
Sbjct: 269 HNLYTEMQEKG-IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALIN 327
Query: 392 PFAK 403
+ K
Sbjct: 328 AYVK 331
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/105 (40%), Positives = 64/105 (60%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ I P+ +TY+ +I+GLCK R+ EA MF M S++ P+ T+++LV G CK G +D
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVD 592
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+ ++L+ EM + I D +TY +LI G K + A IF EM
Sbjct: 593 DGLELFCEM-GRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/112 (34%), Positives = 66/112 (58%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ K +PDV T+N +IDG C RI + + +M ++ +T TY++L+ G C G
Sbjct: 379 VMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVG 438
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
L+ A+ L S+ ++ + PD+VT N+L+DG C + DA ++F M K+K
Sbjct: 439 DLNAALDL-SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/88 (32%), Positives = 53/88 (60%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G K +PDVVT+N ++ G CK GR+ + +F +M R ++ + TY +L+ G K G
Sbjct: 566 MGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGN 625
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLI 283
++ A+ ++ EM + + PD +T S++
Sbjct: 626 INGALDIFQEM-ISSGVYPDTITIRSML 652
>ref|XP_004296029.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 641
Score = 107 bits (266), Expect = 2e-21
Identities = 54/123 (43%), Positives = 76/123 (61%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
IAP+VVTY +I G+C G+ EA + +M SRN+ PN TYS LVDGLCK G + EA
Sbjct: 122 IAPNVVTYTSLIQGVCNTGQFEEATKLLYEMASRNIYPNVVTYSVLVDGLCKEGKVVEAN 181
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+ E++++++I PDVVTYNSL+DG C +A K+F M + + D W L
Sbjct: 182 SVV-EIMIRKDIEPDVVTYNSLMDGYCLRGEMGEARKVFDLMLRKGRMVDVWSCSILING 240
Query: 395 FAK 403
++K
Sbjct: 241 YSK 243
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/119 (42%), Positives = 73/119 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I PDVVTYN ++DG C G + EA +F M + + + W+ S L++G KH +D+
Sbjct: 190 KDIEPDVVTYNSLMDGYCLRGEMGEARKVFDLMLRKGRMVDVWSCSILINGYSKHKKIDQ 249
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
A++L+ EM + EI PD + YN+LIDG CKA R +AEK+F+ M +L + Y L
Sbjct: 250 AIELFEEMF-RLEILPDTIVYNTLIDGFCKAGRMQEAEKLFSRMLSCGQLPNVETYAIL 307
Score = 89.0 bits (219), Expect = 6e-16
Identities = 47/113 (41%), Positives = 64/113 (56%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
++ S ML H PDVVT++ II GLC+ G A + M R N YS+++D
Sbjct: 41 RIFSKMLQGGHCVPDVVTFSTIIKGLCRRGDNNAAIQLLRKMDDRGCKANIVIYSTIIDS 100
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
LCK + +AM L+SEM + I P+VVTY SLI G C +F +A K+ EM
Sbjct: 101 LCKDRLVVDAMNLFSEM-ISRGIAPNVVTYTSLIQGVCNTGQFEEATKLLYEM 152
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/102 (44%), Positives = 59/102 (57%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I PD + YN +IDG CK GR++EAE +FS M S LPN TY+ L+DGLC L AM
Sbjct: 262 ILPDTIVYNTLIDGFCKAGRMQEAEKLFSRMLSCGQLPNVETYAILLDGLCSSQQLSRAM 321
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L EM ++ + V YN +I G KA R A F+ +
Sbjct: 322 ELLREM-EDNKMELNTVIYNIIIKGMWKAGRLKSATDFFSSL 362
Score = 76.3 bits (186), Expect = 4e-12
Identities = 42/99 (42%), Positives = 57/99 (57%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
+ V YN II G+ K GR++ A + FS + S+ V+PN TY+ +++GLC G L EA KL
Sbjct: 335 NTVIYNIIIKGMWKAGRLKSATDFFSSLSSKGVVPNVRTYTMMINGLCNGGLLVEAEKLL 394
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EM K +PD TYN +I G N S A + EM
Sbjct: 395 REMEAK-GCSPDDCTYNIIIRGFIHNNEISRAVQHIEEM 432
>emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 107 bits (266), Expect = 2e-21
Identities = 54/123 (43%), Positives = 79/123 (64%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV+TYN +I GL G+ EAE ++ +M R ++P+T TYSS++DGLCK LDEA
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+++ M K +P+VVT+N+LI+G CKA R D ++F EM + + D+ IY L
Sbjct: 565 QMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 395 FAK 403
F K
Sbjct: 624 FRK 626
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/103 (42%), Positives = 68/103 (66%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
HI P+VV Y+ IIDGLCK GR ++ N+F +MQ + + PN TY+ ++ G C G A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L EM ++ +I+P+VVTYN+LI+ K +F +A +++ EM
Sbjct: 308 QRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L ML K I+P+VVTYN +I+ K G+ EA ++ +M R ++PNT TY+S++DG
Sbjct: 309 RLLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
CK LD A ++ M K +PDV T+ +LIDG C A R D ++ EM
Sbjct: 368 FCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/122 (36%), Positives = 67/122 (54%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
L H+ PDV+T+ +++GLC+ GR+ EA + M + P+ TY + VDG+CK G
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYC 379
A+ L +M I P+VV Y+++IDG CK R SD+ +F EM + Y
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 380 CL 385
C+
Sbjct: 293 CM 294
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/101 (42%), Positives = 62/101 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I P++VTYN +I G C GR A+ + +M R + PN TY++L++ K G E
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIF 331
A +LY EM+ + I P+ +TYNS+IDG CK +R AE +F
Sbjct: 342 AAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMF 381
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/105 (40%), Positives = 64/105 (60%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ I PD +TY+ +IDGLCK R+ EA MF M S++ PN T+++L++G CK G +D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+ ++L+ EM + I D + Y +LI G K + A IF EM
Sbjct: 597 DGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/112 (35%), Positives = 66/112 (58%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ K +PDV T+ +IDG C RI + + +M R ++ NT TY++L+ G C G
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
L+ A+ L S+ ++ + PD+VT N+L+DG C + DA ++F M K+K
Sbjct: 443 DLNAALDL-SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQS-RNVLPNTWTYSSLVDGLCKHGFLDEA 211
+ PD +TY +DG+CK+G A N+ M+ ++ PN YS+++DGLCK G ++
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNK 391
L+ EM K I P++VTYN +I G C + R+S A+++ EM + K + Y L
Sbjct: 273 HNLFIEMQDKG-IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 392 PFAK 403
F K
Sbjct: 332 AFVK 335
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/90 (31%), Positives = 54/90 (60%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G K +P+VVT+N +I+G CK GR+ + +F +M R ++ + Y +L+ G K G
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDG 289
++ A+ ++ EM + + PD +T +++ G
Sbjct: 630 INGALDIFQEM-ISSGVYPDTITIRNMLTG 658
>gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 107 bits (266), Expect = 2e-21
Identities = 54/123 (43%), Positives = 79/123 (64%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV+TYN +I GL G+ EAE ++ +M R ++P+T TYSS++DGLCK LDEA
Sbjct: 507 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+++ M K +P+VVT+N+LI+G CKA R D ++F EM + + D+ IY L
Sbjct: 567 QMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 395 FAK 403
F K
Sbjct: 626 FRK 628
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/103 (43%), Positives = 72/103 (69%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
HI P+VV Y+ IID LCK GR +A+N+F++MQ + + P+ +TY+S++ G C G +A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L EM ++ +I+PDVVTYN+LI+ K +F +A +++ EM
Sbjct: 310 EQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/113 (42%), Positives = 68/113 (60%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L ML K I+PDVVTYN +I+ K G+ EA ++ +M R ++PNT TY+S++DG
Sbjct: 311 QLLQEMLERK-ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 369
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
CK LD A ++ M K +PDV T+ +LIDG C A R D ++ EM
Sbjct: 370 FCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQS-RNVLPNTWTYSSLVDGLCKHGFLDEA 211
+ P +TY I+DG+CK G A N+ M+ +++PN YS+++D LCK G +A
Sbjct: 215 LQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNK 391
L++EM K I PD+ TYNS+I G C + R+SDAE++ EM + K D Y L
Sbjct: 275 QNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 392 PFAK 403
F K
Sbjct: 334 AFVK 337
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = +2
Query: 14 TMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKH 193
T + K I PD+ TYN +I G C GR +AE + +M R + P+ TY++L++ K
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338
Query: 194 GFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIF 331
G EA +LY EM+ + I P+ +TYNS+IDG CK +R AE +F
Sbjct: 339 GKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMF 383
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/112 (38%), Positives = 64/112 (57%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
P+VVT+ +++GLC+ GRI EA + M + P TY ++VDG+CK G A+ L
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
+M I P+VV Y+++ID CK R SDA+ +F EM + D + Y
Sbjct: 242 LRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/105 (40%), Positives = 64/105 (60%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ I PD +TY+ +IDGLCK R+ EA MF M S++ PN T+++L++G CK G +D
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 598
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+ ++L+ EM + I D + Y +LI G K + A IF EM
Sbjct: 599 DGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/112 (35%), Positives = 66/112 (58%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ K +PDV T+ +IDG C RI + + +M R ++ NT TY++L+ G C G
Sbjct: 385 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
L+ A+ L S+ ++ + PD+VT N+L+DG C + DA ++F M K+K
Sbjct: 445 DLNAALDL-SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/90 (31%), Positives = 54/90 (60%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G K +P+VVT+N +I+G CK GR+ + +F +M R ++ + Y +L+ G K G
Sbjct: 572 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 631
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDG 289
++ A+ ++ EM + + PD +T +++ G
Sbjct: 632 INGALDIFQEM-ISSGVYPDTITIRNMLTG 660
>gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 107 bits (266), Expect = 2e-21
Identities = 54/123 (43%), Positives = 79/123 (64%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV+TYN +I GL G+ EAE ++ +M R ++P+T TYSS++DGLCK LDEA
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+++ M K +P+VVT+N+LI+G CKA R D ++F EM + + D+ IY L
Sbjct: 565 QMFVSMGSK-SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 395 FAK 403
F K
Sbjct: 624 FRK 626
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/103 (42%), Positives = 68/103 (66%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
HI P+VV Y+ IIDGLCK GR ++ N+F +MQ + + PN TY+ ++ G C G A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L EM ++ +I+P+VVTYN+LI+ K +F +A +++ EM
Sbjct: 308 QRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/113 (41%), Positives = 68/113 (60%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L ML K I+P+VVTYN +I+ K G+ EA ++ +M R ++PNT TY+S++DG
Sbjct: 309 RLLQEMLERK-ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
CK LD A ++ M K +PDV T+ +LIDG C A R D ++ EM
Sbjct: 368 FCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/122 (36%), Positives = 67/122 (54%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
L H+ PDV+T+ +++GLC+ GR+ EA + M + P+ TY + VDG+CK G
Sbjct: 173 LFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYC 379
A+ L +M I P+VV Y+++IDG CK R SD+ +F EM + Y
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 380 CL 385
C+
Sbjct: 293 CM 294
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/101 (42%), Positives = 62/101 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I P++VTYN +I G C GR A+ + +M R + PN TY++L++ K G E
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIF 331
A +LY EM+ + I P+ +TYNS+IDG CK +R AE +F
Sbjct: 342 AAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMF 381
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/105 (40%), Positives = 64/105 (60%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ I PD +TY+ +IDGLCK R+ EA MF M S++ PN T+++L++G CK G +D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+ ++L+ EM + I D + Y +LI G K + A IF EM
Sbjct: 597 DGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/112 (35%), Positives = 66/112 (58%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ K +PDV T+ +IDG C RI + + +M R ++ NT TY++L+ G C G
Sbjct: 383 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNK 352
L+ A+ L S+ ++ + PD+VT N+L+DG C + DA ++F M K+K
Sbjct: 443 DLNAALDL-SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQS-RNVLPNTWTYSSLVDGLCKHGFLDEA 211
+ PD +TY +DG+CK+G A N+ M+ ++ PN YS+++DGLCK G ++
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNK 391
L+ EM K I P++VTYN +I G C + R+S A+++ EM + K + Y L
Sbjct: 273 HNLFIEMQDKG-IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 392 PFAK 403
F K
Sbjct: 332 AFVK 335
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/90 (31%), Positives = 54/90 (60%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G K +P+VVT+N +I+G CK GR+ + +F +M R ++ + Y +L+ G K G
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGN 629
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDG 289
++ A+ ++ EM + + PD +T +++ G
Sbjct: 630 INGALDIFQEM-ISSGVYPDTITIRNMLTG 658
>ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 545
Score = 106 bits (264), Expect = 4e-21
Identities = 50/105 (47%), Positives = 75/105 (71%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K++ DVVTYN ++DG C + ++ +A+++F+ M R V P+ W+YS +++G CK +DE
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDE 356
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMH 343
AMKL+ EM K +I P+VVTYNSL+DG CK+ R S A ++ EMH
Sbjct: 357 AMKLFEEMHCK-QIFPNVVTYNSLVDGLCKSGRTSCALELVDEMH 400
Score = 100 bits (248), Expect = 3e-19
Identities = 50/125 (40%), Positives = 77/125 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I+PDVVTY+ +I G C +G+++ A ++F+ M S N+ PN +T+S L+DG CK G + E
Sbjct: 227 KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVRE 286
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A + + M +K+ + DVVTYNSL+DG C + + A+ +F M + D W Y +
Sbjct: 287 AKNVLAVM-MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345
Query: 389 KPFAK 403
F K
Sbjct: 346 NGFCK 350
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/109 (37%), Positives = 64/109 (58%)
Frame = +2
Query: 14 TMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKH 193
T + K I PD+ TY +I+GLCK+GR+ +A+ +F D+ + PN +TY+SL++G C
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491
Query: 194 GFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
GF DE + + S+M P+ +TY LI + + AEK+ EM
Sbjct: 492 GFFDEGLAMLSKM-KDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 34/142 (23%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ + + PDV +Y+ +I+G CK+ + EA +F +M + + PN TY+SLVDGLCK G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387
Query: 197 FLDEAMKLYSEM----------------------------------VVKEEITPDVVTYN 274
A++L EM + ++ I PD+ TY
Sbjct: 388 RTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYT 447
Query: 275 SLIDGCCKANRFSDAEKIFAEM 340
LI+G CK R DA+K+F ++
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDL 469
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/116 (36%), Positives = 68/116 (58%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K + P+VV Y+ IID +CK + +A +++ +M S+ + P+ TYSSL+ G C G L
Sbjct: 192 KLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKY 251
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A+ L++ M + + I P+V T++ LIDG CK + +A+ + A M K D Y
Sbjct: 252 AVDLFNRM-ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTY 306
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/99 (39%), Positives = 59/99 (59%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D V+Y +I+GLC++G + A + + + V PN YS+++D +CK +++A LY
Sbjct: 162 DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY 221
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EMV K I+PDVVTY+SLI G C + A +F M
Sbjct: 222 CEMVSK-RISPDVVTYSSLISGFCVVGKLKYAVDLFNRM 259
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/102 (33%), Positives = 66/102 (64%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
+++TYN I+D +CK + +A + + ++ + + P+ +TY+ L++GLCK G LD+A K++
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKN 349
+++VK +P++ TY SLI+G C F + + ++M N
Sbjct: 467 EDLLVK-GYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507
Score = 59.7 bits (143), Expect = 4e-07
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Frame = +2
Query: 8 CSTMLGH-------------KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLP 148
C + LGH K PD VT+ +I GLC G + +A + ++
Sbjct: 102 CFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQL 161
Query: 149 NTWTYSSLVDGLCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKI 328
+ +Y +L++GLC+ G A++L V + + P+VV Y+++ID CK +DA +
Sbjct: 162 DQVSYGTLINGLCRVGETKAAVQLL-RRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDL 220
Query: 329 FAEMHKNKELRDSWIYCCLNKPF 397
+ EM + D Y L F
Sbjct: 221 YCEMVSKRISPDVVTYSSLISGF 243
>ref|XP_006300878.1| hypothetical protein CARUB_v10019968mg [Capsella rubella]
gi|482569588|gb|EOA33776.1| hypothetical protein
CARUB_v10019968mg [Capsella rubella]
Length = 626
Score = 105 bits (263), Expect = 5e-21
Identities = 56/132 (42%), Positives = 84/132 (63%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L S M+ K I PDVVT+N +ID K G++ EAE ++ +M R++ PN TY+SL++G
Sbjct: 310 RLLSDMI-EKKINPDVVTFNALIDAFSKEGKLLEAEKLYEEMIQRSIDPNNVTYNSLING 368
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR 361
C H LD+A +++ E +V ++ PDVVTYN+LI G CK NR D ++F+EM +
Sbjct: 369 FCIHDRLDKANQMF-EFMVSKDCLPDVVTYNTLIKGFCKGNRVEDGMELFSEMSERGLNG 427
Query: 362 DSWIYCCLNKPF 397
D+ Y L + F
Sbjct: 428 DTLTYNTLMQGF 439
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/126 (41%), Positives = 71/126 (56%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
+K + PDV+TYN +I LC GR A + SDM + + P+ T+++L+D K G L
Sbjct: 282 NKGVKPDVITYNSLISCLCNYGRWNYASRLLSDMIEKKINPDVVTFNALIDAFSKEGKLL 341
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
EA KLY EM ++ I P+ VTYNSLI+G C +R A ++F M L D Y L
Sbjct: 342 EAEKLYEEM-IQRSIDPNNVTYNSLINGFCIHDRLDKANQMFEFMVSKDCLPDVVTYNTL 400
Query: 386 NKPFAK 403
K F K
Sbjct: 401 IKGFCK 406
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/102 (43%), Positives = 69/102 (67%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I +VV YN +IDGLCK ++ +A +F+ M+++ V P+ TY+SL+ LC +G + A
Sbjct: 250 IEANVVIYNTVIDGLCKYRQVDDAVELFNKMENKGVKPDVITYNSLISCLCNYGRWNYAS 309
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L S+M+ K +I PDVVT+N+LID K + +AEK++ EM
Sbjct: 310 RLLSDMIEK-KINPDVVTFNALIDAFSKEGKLLEAEKLYEEM 350
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/125 (35%), Positives = 76/125 (60%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K P+VVTY+ +++G+CK G I A N+ M+ + N Y++++DGLCK+ +D+
Sbjct: 213 KGCQPNVVTYSVVVNGVCKRGDIDLALNLVKKMEVAKIEANVVIYNTVIDGLCKYRQVDD 272
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A++L+++M K + PDV+TYNSLI C R++ A ++ ++M + K D + L
Sbjct: 273 AVELFNKMENK-GVKPDVITYNSLISCLCNYGRWNYASRLLSDMIEKKINPDVVTFNALI 331
Query: 389 KPFAK 403
F+K
Sbjct: 332 DAFSK 336
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/116 (36%), Positives = 65/116 (56%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PDVVTYN +I G CK R+ + +FS+M R + +T TY++L+ G + D
Sbjct: 388 KDCLPDVVTYNTLIKGFCKGNRVEDGMELFSEMSERGLNGDTLTYNTLMQGFFQARDCDN 447
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A K+Y +M + + P+ +TYN L+DG CK + A +F ++ K+K D Y
Sbjct: 448 AQKVYQKM-ESDGVPPNSMTYNLLLDGLCKNGKLEKALVVFLDLQKSKTKLDILSY 502
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ P+ +TYN ++DGLCK G++ +A +F D+Q + +Y+ ++DG+CK G +++
Sbjct: 460 VPPNSMTYNLLLDGLCKNGKLEKALVVFLDLQKSKTKLDILSYTIMIDGMCKAGKVEDGW 519
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
L+ + + PDV TY ++I G C +A +F +M ++ L + Y
Sbjct: 520 NLFCNL---SFVKPDVKTYTTMISGFCGKGLMQEANALFKKMKEDGILPNDCTY 570
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D +N +I GL + ++ EA + M ++ PN TYS +V+G+CK G +D A+ L
Sbjct: 183 DAWAFNTLIHGLFRDNKVSEAVGLVERMVAKGCQPNVVTYSVVVNGVCKRGDIDLALNLV 242
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR------DSWIYCCL 385
+M V +I +VV YN++IDG CK + DA ++F +M +NK ++ +S I C
Sbjct: 243 KKMEV-AKIEANVVIYNTVIDGLCKYRQVDDAVELFNKM-ENKGVKPDVITYNSLISCLC 300
Query: 386 N 388
N
Sbjct: 301 N 301
>ref|XP_006300877.1| hypothetical protein CARUB_v10019968mg [Capsella rubella]
gi|482569587|gb|EOA33775.1| hypothetical protein
CARUB_v10019968mg [Capsella rubella]
Length = 452
Score = 105 bits (263), Expect = 5e-21
Identities = 56/132 (42%), Positives = 84/132 (63%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L S M+ K I PDVVT+N +ID K G++ EAE ++ +M R++ PN TY+SL++G
Sbjct: 136 RLLSDMI-EKKINPDVVTFNALIDAFSKEGKLLEAEKLYEEMIQRSIDPNNVTYNSLING 194
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR 361
C H LD+A +++ E +V ++ PDVVTYN+LI G CK NR D ++F+EM +
Sbjct: 195 FCIHDRLDKANQMF-EFMVSKDCLPDVVTYNTLIKGFCKGNRVEDGMELFSEMSERGLNG 253
Query: 362 DSWIYCCLNKPF 397
D+ Y L + F
Sbjct: 254 DTLTYNTLMQGF 265
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/126 (41%), Positives = 71/126 (56%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
+K + PDV+TYN +I LC GR A + SDM + + P+ T+++L+D K G L
Sbjct: 108 NKGVKPDVITYNSLISCLCNYGRWNYASRLLSDMIEKKINPDVVTFNALIDAFSKEGKLL 167
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
EA KLY EM ++ I P+ VTYNSLI+G C +R A ++F M L D Y L
Sbjct: 168 EAEKLYEEM-IQRSIDPNNVTYNSLINGFCIHDRLDKANQMFEFMVSKDCLPDVVTYNTL 226
Query: 386 NKPFAK 403
K F K
Sbjct: 227 IKGFCK 232
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/102 (43%), Positives = 69/102 (67%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I +VV YN +IDGLCK ++ +A +F+ M+++ V P+ TY+SL+ LC +G + A
Sbjct: 76 IEANVVIYNTVIDGLCKYRQVDDAVELFNKMENKGVKPDVITYNSLISCLCNYGRWNYAS 135
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L S+M+ K +I PDVVT+N+LID K + +AEK++ EM
Sbjct: 136 RLLSDMIEK-KINPDVVTFNALIDAFSKEGKLLEAEKLYEEM 176
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/125 (35%), Positives = 76/125 (60%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K P+VVTY+ +++G+CK G I A N+ M+ + N Y++++DGLCK+ +D+
Sbjct: 39 KGCQPNVVTYSVVVNGVCKRGDIDLALNLVKKMEVAKIEANVVIYNTVIDGLCKYRQVDD 98
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A++L+++M K + PDV+TYNSLI C R++ A ++ ++M + K D + L
Sbjct: 99 AVELFNKMENK-GVKPDVITYNSLISCLCNYGRWNYASRLLSDMIEKKINPDVVTFNALI 157
Query: 389 KPFAK 403
F+K
Sbjct: 158 DAFSK 162
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/116 (36%), Positives = 65/116 (56%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PDVVTYN +I G CK R+ + +FS+M R + +T TY++L+ G + D
Sbjct: 214 KDCLPDVVTYNTLIKGFCKGNRVEDGMELFSEMSERGLNGDTLTYNTLMQGFFQARDCDN 273
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A K+Y +M + + P+ +TYN L+DG CK + A +F ++ K+K D Y
Sbjct: 274 AQKVYQKM-ESDGVPPNSMTYNLLLDGLCKNGKLEKALVVFLDLQKSKTKLDILSY 328
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ P+ +TYN ++DGLCK G++ +A +F D+Q + +Y+ ++DG+CK G +++
Sbjct: 286 VPPNSMTYNLLLDGLCKNGKLEKALVVFLDLQKSKTKLDILSYTIMIDGMCKAGKVEDGW 345
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
L+ + + PDV TY ++I G C +A +F +M ++ L + Y
Sbjct: 346 NLFCNL---SFVKPDVKTYTTMISGFCGKGLMQEANALFKKMKEDGILPNDCTY 396
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D +N +I GL + ++ EA + M ++ PN TYS +V+G+CK G +D A+ L
Sbjct: 9 DAWAFNTLIHGLFRDNKVSEAVGLVERMVAKGCQPNVVTYSVVVNGVCKRGDIDLALNLV 68
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR------DSWIYCCL 385
+M V +I +VV YN++IDG CK + DA ++F +M +NK ++ +S I C
Sbjct: 69 KKMEV-AKIEANVVIYNTVIDGLCKYRQVDDAVELFNKM-ENKGVKPDVITYNSLISCLC 126
Query: 386 N 388
N
Sbjct: 127 N 127
>ref|XP_002309562.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 105 bits (262), Expect = 6e-21
Identities = 50/117 (42%), Positives = 74/117 (63%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ + PD V YN +I GLC+LGR+REA+++F +M S LP+ +TYS L+DG CK G+L
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
+A +L+ ++ + PD+ YN LID CK DA K+F+E+ L + IY
Sbjct: 463 KAFRLF-RVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIY 518
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/123 (37%), Positives = 71/123 (57%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDVVTY+ ++ G I EA +F M ++ P+ ++Y+ L+ G CK +DEA
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+L++EM + + +TPD V YN+LI G C+ R +A+ +F MH N L D + Y L
Sbjct: 396 QLFNEM-IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454
Query: 395 FAK 403
F K
Sbjct: 455 FCK 457
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/125 (37%), Positives = 72/125 (57%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I+PD+ TYN +I GLC R +EA + ++M S N++PN +T++ LVD +CK G + E
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSE 323
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A ++ M + + PDVVTY+SL+ G +A K+F M D++ Y L
Sbjct: 324 AQGVFKTM-TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILI 382
Query: 389 KPFAK 403
K + K
Sbjct: 383 KGYCK 387
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/114 (36%), Positives = 66/114 (57%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PD VT+N +I+GLCK+G+ +A F D ++ P +TY+++++GLCK G A
Sbjct: 161 LQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAA 220
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
L+ +M + P+VVTYN LID CK ++A IF+ M + D + Y
Sbjct: 221 GLFKKM-EEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/100 (41%), Positives = 63/100 (63%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
P+VVTYN +ID LCK + EA ++FS M+++ + P+ +TY+SL+ GLC EA L
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+EM I P++ T+N L+D CK + S+A+ +F M
Sbjct: 293 LNEM-TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/103 (33%), Positives = 62/103 (60%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
++ PD+ YN +ID +CK G +++A +FS++ + +LPN Y+++++ LCK G LDEA
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
++ + M + PD +YN +I G + S A ++ EM
Sbjct: 535 LEAFRNM-EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/104 (29%), Positives = 58/104 (55%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
++PD+ T + +ID L R+ A ++FS M + P+ T+++L++GLCK G +A+
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHK 346
+ + + P V TY ++I+G CK + A +F +M +
Sbjct: 186 EFFDDFEA-SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE 228
>ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 512
Score = 105 bits (262), Expect = 6e-21
Identities = 56/125 (44%), Positives = 77/125 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I PDVVTYN +IDGLCK GRI A + +M R PN TY+SL+D LCK+ +D+
Sbjct: 378 KQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDK 437
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A++L +++ I P V TYN LI+G CK+ R DA+K+F ++ N D + Y +
Sbjct: 438 AIELLTKL-KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496
Query: 389 KPFAK 403
K F K
Sbjct: 497 KGFCK 501
Score = 104 bits (260), Expect = 1e-20
Identities = 50/105 (47%), Positives = 71/105 (67%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K + P++VTYN +++G C + + +AE++F+ M V P+ +YS ++ G CK +DE
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMH 343
AMKL+ EM K +I PDVVTYNSLIDG CK+ R S A K+ EMH
Sbjct: 368 AMKLFEEMHCK-QIFPDVVTYNSLIDGLCKSGRISYALKLIGEMH 411
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/125 (38%), Positives = 72/125 (57%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I P VVTYN +I GLC +G++++A + M N+ P +T+S LVD CK G + E
Sbjct: 238 KRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKE 297
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLN 388
A ++ M +K+++ P++VTYNSL++G C N + AE IF M + D Y +
Sbjct: 298 AKNVFVVM-MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Query: 389 KPFAK 403
F K
Sbjct: 357 SGFCK 361
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/129 (34%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K + DVV YN IIDG+CK + +A + +S+M ++ + P TY++L+ GLC G L +
Sbjct: 203 KLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKD 262
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWI----- 373
A+ L +M++ E I P V T++ L+D CK + +A+ +F M K K+++ + +
Sbjct: 263 AIGLLHKMIL-ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK-KDVKPNIVTYNSL 320
Query: 374 ---YCCLNK 391
YC +N+
Sbjct: 321 MNGYCLVNE 329
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/97 (38%), Positives = 58/97 (59%)
Frame = +2
Query: 50 VTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLYSE 229
V+Y +I+GLCK+G+ + A M + + V + Y++++DG+CK +++A YSE
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234
Query: 230 MVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
MV K I P VVTYN+LI G C + DA + +M
Sbjct: 235 MVAK-RICPTVVTYNTLICGLCIMGQLKDAIGLLHKM 270
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Frame = +2
Query: 8 CSTMLGHKHIA-------------PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLP 148
C + LGH ++ PD +T +I GLC G I +A + + +
Sbjct: 113 CFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQL 172
Query: 149 NTWTYSSLVDGLCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKI 328
N +Y +L++GLCK G A+++ + K + DVV YN++IDG CK +DA
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGK-LVRLDVVMYNTIIDGVCKDKLVNDAFDF 231
Query: 329 FAEM 340
++EM
Sbjct: 232 YSEM 235
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +2
Query: 14 TMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKH 193
T L +I P V TYN +I+GLCK GR+++A+ +F D+ + +TY++++ G CK
Sbjct: 443 TKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Query: 194 GFL 202
GF+
Sbjct: 503 GFV 505
>ref|XP_002319940.2| hypothetical protein POPTR_0013s14640g [Populus trichocarpa]
gi|566201353|ref|XP_006376538.1| hypothetical protein
POPTR_0013s14640g [Populus trichocarpa]
gi|550325856|gb|EEE95863.2| hypothetical protein
POPTR_0013s14640g [Populus trichocarpa]
gi|550325857|gb|ERP54335.1| hypothetical protein
POPTR_0013s14640g [Populus trichocarpa]
Length = 558
Score = 105 bits (261), Expect = 8e-21
Identities = 52/116 (44%), Positives = 72/116 (62%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ + PD V+YN +I GLC+ R EAE +F DM S PN TYS L+D L K G+LD
Sbjct: 402 HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD 461
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWI 373
+AM L+ M + PD+VTYN +IDG CK +F DA ++FAE+ ++W+
Sbjct: 462 QAMGLFRAM-ENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWV 516
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/105 (40%), Positives = 67/105 (63%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV TYN +++G C + EA +F M S+ +P+ +++S LV+G CK +DEA
Sbjct: 335 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAK 394
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKN 349
+L+ EM + PD V+YN+LI G C+A R +AE++F +MH N
Sbjct: 395 QLFDEM-THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSN 438
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/123 (34%), Positives = 67/123 (54%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I P VVTY +I GL LGR +EA + ++M+ N++P+ +S L+D +CK G + EA
Sbjct: 265 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 324
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+ M + + PDV TYN+L++G C +A K+F M + D + + L
Sbjct: 325 VILKTM-TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNG 383
Query: 395 FAK 403
+ K
Sbjct: 384 YCK 386
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/115 (33%), Positives = 68/115 (59%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
+I PD+V ++ +ID +CK G + EA + M V P+ TY++L++G C + EA
Sbjct: 299 NIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEA 358
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
K++ M+ K + PDV +++ L++G CKA R +A+++F EM + D+ Y
Sbjct: 359 RKVFEVMISKGRM-PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSY 412
Score = 75.1 bits (183), Expect = 9e-12
Identities = 30/74 (40%), Positives = 51/74 (68%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PD+VTYN +IDG+CK G+ ++A +F+++ + + PN W + +DG+CK G LDEA
Sbjct: 475 LKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAH 534
Query: 215 KLYSEMVVKEEITP 256
K + +M K++ +P
Sbjct: 535 KAFRQM-EKDDCSP 547
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/102 (37%), Positives = 59/102 (57%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ P+V+T++ +I+G C G+I A +F M +R PN +YS ++ GLC+ G E +
Sbjct: 160 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 219
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
KL M V PDVV YN+++D CK ++A IF +M
Sbjct: 220 KLLEHMKV-VGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 260
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/100 (42%), Positives = 55/100 (55%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PDVV YN I+D LCK + EA ++F M+ +LP TY+SL+ GL G EA L
Sbjct: 232 PDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGL 291
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+EM I PD+V ++ LID CK S+A I M
Sbjct: 292 LNEM-KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 330
>ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat
protein-like protein [Medicago truncatula]
Length = 841
Score = 104 bits (260), Expect = 1e-20
Identities = 49/104 (47%), Positives = 73/104 (70%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I PDV TYN +I G C +G++++A ++F+ M S+N++P+ +T+S LVDG CK G + E
Sbjct: 362 KRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKE 421
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
A + + M++K+ I PDVVTY+SL+DG C N + AE IF M
Sbjct: 422 AKNVLA-MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Score = 102 bits (255), Expect = 4e-20
Identities = 52/120 (43%), Positives = 77/120 (64%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
M+ + I PDVVTY+ ++DG C + + +AE++F+ M R V N +Y+ +++G CK
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
+DEAMKL+ EM K +I PDV+TY+SLIDG CK+ R S A ++ EMH + D Y
Sbjct: 488 MVDEAMKLFKEMHHK-QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITY 546
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/105 (40%), Positives = 67/105 (63%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
HK I PDV+TY+ +IDGLCK GRI A + +M R P+ TY+S++D LCK +D
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+A+ L +++ + I PD+ TY L+ G C++ + DA K+F ++
Sbjct: 561 KAITLLTKL-KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/120 (35%), Positives = 66/120 (55%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D V+Y +I+GLCK+G + A + + V P+ Y++++DG+CK +++A LY
Sbjct: 297 DQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLY 356
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKPFAK 403
SE V K I PDV TYN+LI G C + DA +F +M + D + + L F K
Sbjct: 357 SEKVSK-RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/112 (33%), Positives = 66/112 (58%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PD++TYN I+D LCK + +A + + ++ + + P+ TY+ LV GLC+ G L++A K+
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
+ +++VK DV Y +I G C F +A + ++M +N + D+ Y
Sbjct: 601 FEDLLVK-GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/109 (31%), Positives = 57/109 (52%)
Frame = +2
Query: 14 TMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKH 193
T L + I PD+ TY ++ GLC+ G++ +A +F D+ + + + Y+ ++ G C
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626
Query: 194 GFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
G DEA+ L S+M + PD TY +I + + AEK+ EM
Sbjct: 627 GLFDEALALLSKM-EENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674
>ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata] gi|297332289|gb|EFH62707.1| hypothetical protein
ARALYDRAFT_475066 [Arabidopsis lyrata subsp. lyrata]
Length = 332
Score = 104 bits (260), Expect = 1e-20
Identities = 53/124 (42%), Positives = 78/124 (62%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
++ PDVVT+N +I+ K G+I EAE ++ +M RN+ P+T TY+SL+DG CKH LD+A
Sbjct: 145 NVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDA 204
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNK 391
++ MV K +P+V+T N+LI GCC+A R D K+ EM + + DS Y L
Sbjct: 205 KHIFDLMVSKGG-SPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIH 263
Query: 392 PFAK 403
F +
Sbjct: 264 GFCQ 267
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ HI DVV Y IID LCK G +A+N+F++M + + PN TY+ ++DG C +G
Sbjct: 71 MDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGK 130
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYC 379
+A +L +M ++ + PDVVT+N+LI+ K + S+AE+++ EM D+ Y
Sbjct: 131 WTDAEQLLRDM-IESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYN 189
Query: 380 CLNKPFAK 403
L F K
Sbjct: 190 SLIDGFCK 197
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/113 (39%), Positives = 72/113 (63%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
+L MLG ++I PD +TYN +IDG CK R+ +A+++F M S+ PN T ++L+ G
Sbjct: 171 ELYREMLG-RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG 229
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
C+ +D+ +KL EM ++ + PD V+YN+LI G C+A + A+ +F EM
Sbjct: 230 CCRAKRVDDGIKLLHEM-LRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/127 (34%), Positives = 73/127 (57%)
Frame = +2
Query: 23 GHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFL 202
GH+ P+ VTY I++G+CK+G A N+ M ++ + Y++++D LCK G
Sbjct: 40 GHQ---PNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHH 96
Query: 203 DEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCC 382
+A L++EM K I P+V+TYN +IDGCC +++DAE++ +M ++ D +
Sbjct: 97 SKAQNLFTEMHDK-GIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNA 155
Query: 383 LNKPFAK 403
L F K
Sbjct: 156 LINAFVK 162
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
DVV +N +++GLC+ GR+ EAE + M PN TY ++V+G+CK G D A+ L
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLL 68
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
+M + I DVV Y ++ID CK S A+ +F EMH + Y C+
Sbjct: 69 RKM-DESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCM 121
>ref|XP_006442356.1| hypothetical protein CICLE_v10024500mg [Citrus clementina]
gi|557544618|gb|ESR55596.1| hypothetical protein
CICLE_v10024500mg [Citrus clementina]
Length = 515
Score = 104 bits (259), Expect = 1e-20
Identities = 52/116 (44%), Positives = 76/116 (65%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
+++ P +VTY+ ++DG C +GRI +A N+F M + PN +Y+ L++G CK G +DE
Sbjct: 225 RNVDPGIVTYSTLLDGFCLVGRIDDARNLFVSMMDKGCRPNVVSYTILINGYCKRGKVDE 284
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
AM LYSEMV K I P+VVTY++L+ G +A R DA K+F M NK + +S Y
Sbjct: 285 AMSLYSEMVSK-GIRPNVVTYSALLAGLFQAGRVGDARKLFDGMKFNKVIPNSRTY 339
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/117 (36%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K I P+VVTY+ ++ GL + GR+ +A +F M+ V+PN+ TY + +DGLCK+G+L E
Sbjct: 295 KGIRPNVVTYSALLAGLFQAGRVGDARKLFDGMKFNKVIPNSRTYVAHIDGLCKNGYLSE 354
Query: 209 AMKLYSEMV-VKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A++L+ + K + ++ +N LIDG CKA R A ++F ++ ++ + D Y
Sbjct: 355 ALELFHNLENCKFKFVIEI--FNCLIDGLCKARRLETALELFHKLSHHRLVPDVVTY 409
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 15/115 (13%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG------------- 181
P VTY IIDGLCK G I +A+++F +M+S+ + N Y+ LV G
Sbjct: 144 PTTVTYAVIIDGLCKDGYIDKAKDLFLEMKSKGIHANVVAYNCLVHGFCCDDVVTLNVMI 203
Query: 182 --LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
LCK+G +D+A ++ E++++ + P +VTY++L+DG C R DA +F M
Sbjct: 204 DYLCKNGKVDKASEML-ELMIQRNVDPGIVTYSTLLDGFCLVGRIDDARNLFVSM 257
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PDVVT++ +I G C GRI EA +F + + PN TY +L+ GLC+ G A++L
Sbjct: 68 PDVVTFDTLIKGFCTEGRILEATKLFKKVVAFGCTPNAITYGTLITGLCRTGNTTLALRL 127
Query: 221 YSEMV-----VKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWI-YCC 382
+ EMV + P VTY +IDG CK A+ +F EM K+K + + + Y C
Sbjct: 128 HEEMVNGINTLGVICKPTTVTYAVIIDGLCKDGYIDKAKDLFLEM-KSKGIHANVVAYNC 186
Query: 383 L 385
L
Sbjct: 187 L 187
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/100 (29%), Positives = 56/100 (56%)
Frame = +2
Query: 56 YNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLYSEMV 235
+N +IDGLCK R+ A +F + ++P+ TY+ ++ GLC+ G L++ + +M
Sbjct: 374 FNCLIDGLCKARRLETALELFHKLSHHRLVPDVVTYNIMISGLCREGQLEKENGMLLDM- 432
Query: 236 VKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKE 355
+ P+ +T+++L+ C +D +K+ +HK KE
Sbjct: 433 DRMGCAPNAITFSTLM---CTFLENNDKQKVVELLHKMKE 469
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/97 (28%), Positives = 50/97 (51%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
L H + PDVVTYN +I GLC+ G++ + M DM PN T+S+L+ ++
Sbjct: 397 LSHHRLVPDVVTYNIMISGLCREGQLEKENGMLLDMDRMGCAPNAITFSTLMCTFLENND 456
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRF 310
+ ++L +M + + PD + ++D K ++
Sbjct: 457 KQKVVELLHKM-KERNVMPDAYVCSVVVDLLAKDEKY 492
>ref|XP_006382722.1| helicase domain-containing family protein [Populus trichocarpa]
gi|550338089|gb|ERP60519.1| helicase domain-containing
family protein [Populus trichocarpa]
Length = 588
Score = 104 bits (259), Expect = 1e-20
Identities = 49/107 (45%), Positives = 75/107 (70%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ K + PD VTY+ ++ GLC++GR +EA N+F +M S +LP+ TYS+L+DGLCKHG
Sbjct: 374 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 433
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
LDEA+KL M + +I PD+V YN LI+G A + A+++F+++
Sbjct: 434 LDEALKLLKSM-QESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL 479
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/98 (46%), Positives = 67/98 (68%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I PDVVTY+ I+ G C LG + EA +F++M RNV+PNT T++ LVDGLCK G + EA
Sbjct: 239 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEAR 298
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKI 328
++ E + K+ P+ TYN+L+DG C N+ +A+K+
Sbjct: 299 CVF-EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 335
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/127 (35%), Positives = 76/127 (59%)
Frame = +2
Query: 5 LCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGL 184
L + M+G +++ P+ VT+ ++DGLCK G + EA +F M + PN +TY++L+DG
Sbjct: 265 LFNEMVG-RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 323
Query: 185 CKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRD 364
C + +DEA K+ +++V + P V +YN LI+G CK R +A+ + EM + + D
Sbjct: 324 CLNNQMDEAQKVL-DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPD 382
Query: 365 SWIYCCL 385
+ Y L
Sbjct: 383 TVTYSTL 389
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/116 (37%), Positives = 71/116 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K AP V +YN +I+G CK R+ EA+++ +M + + P+T TYS+L+ GLC+ G E
Sbjct: 342 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 401
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A+ L+ EM + PD++TY++L+DG CK +A K+ M ++K D +Y
Sbjct: 402 ALNLFKEM-CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 456
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/106 (38%), Positives = 64/106 (60%)
Frame = +2
Query: 23 GHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFL 202
GH+ PDV++Y+ +I+GLCK G A + M+ + PN Y++++D LCK +
Sbjct: 168 GHQ---PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 224
Query: 203 DEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
++AM L SEM V I PDVVTY++++ G C ++A +F EM
Sbjct: 225 NDAMDLLSEM-VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 269
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/119 (36%), Positives = 68/119 (57%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K P++V Y IID LCK + +A ++ S+M R + P+ TYS+++ G C G L+E
Sbjct: 202 KGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNE 261
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
A L++EMV + + P+ VT+ L+DG CK S+A +F M K +++ Y L
Sbjct: 262 ATILFNEMVGR-NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNAL 319
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/102 (37%), Positives = 62/102 (60%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
I PD +T+N +I+G C G I+EA +F++M R P+ +YS++++GLCK G A+
Sbjct: 134 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 193
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+L +M K P++V Y ++ID CK +DA + +EM
Sbjct: 194 QLLRKMEEK-GCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 234
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/122 (31%), Positives = 65/122 (53%)
Frame = +2
Query: 2 KLCSTMLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDG 181
KL +M K I PD+V YN +I+G+ G++ A+ +FS + + + P TY+ ++ G
Sbjct: 439 KLLKSMQESK-IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 497
Query: 182 LCKHGFLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELR 361
L K G DEA +L+ +M + P+ +YN +I G + S A ++ EM +
Sbjct: 498 LLKEGLSDEAYELFRKM-EDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSA 556
Query: 362 DS 367
DS
Sbjct: 557 DS 558
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/104 (29%), Positives = 63/104 (60%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ +V + N +I+ LC+L + A ++ M + P+ T+++L++G C G + EA+
Sbjct: 99 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAV 158
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHK 346
L++EM V+ PDV++Y+++I+G CK+ S A ++ +M +
Sbjct: 159 GLFNEM-VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE 201
>ref|XP_006382084.1| hypothetical protein POPTR_0006s27340g [Populus trichocarpa]
gi|550337191|gb|ERP59881.1| hypothetical protein
POPTR_0006s27340g [Populus trichocarpa]
Length = 483
Score = 104 bits (259), Expect = 1e-20
Identities = 47/105 (44%), Positives = 72/105 (68%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ + PD+V+YN +IDGLC+LGR+REA ++F +M + LP+ TYS L+DG CK G+L
Sbjct: 297 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 356
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+A +L+ M + P++V YN LID CK+ +A K+F+E+
Sbjct: 357 KAFRLFRAM-QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 400
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/123 (34%), Positives = 72/123 (58%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ P+VVTY+ +++G + EA +F M ++ P+ ++Y+ L++G CK + EA
Sbjct: 230 VEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 289
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+L++EM + + +TPD+V+YN+LIDG C+ R +A +F M N L D Y L
Sbjct: 290 QLFNEM-IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 348
Query: 395 FAK 403
F K
Sbjct: 349 FCK 351
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PDV TY II+GLCK+G A +F M P+ TYS+++D LCK ++EA+ +
Sbjct: 92 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 151
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+S M K I+P++ TYNSLI G C +R+ +A + EM
Sbjct: 152 FSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEM 190
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/104 (39%), Positives = 65/104 (62%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PDV +YN +I+G CK RI EA+ +F++M + + P+ +Y++L+DGLC+ G L E
Sbjct: 263 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 322
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
A L+ M+ + PD+ TY+ L+DG CK + A ++F M
Sbjct: 323 AHDLFKNMLTNGNL-PDLCTYSILLDGFCKQGYLAKAFRLFRAM 365
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/98 (40%), Positives = 64/98 (65%)
Frame = +2
Query: 47 VVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLYS 226
+VT+N +I+GLCK+G+ +A +F DM +R P+ TY+++++GLCK G A L+
Sbjct: 59 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFK 118
Query: 227 EMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+M + PDVVTY+++ID CK R ++A IF+ M
Sbjct: 119 KM-GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 155
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/103 (40%), Positives = 62/103 (60%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
+I P++VT++ +I+ CK G + EA + M V PN TYSSL++G + EA
Sbjct: 194 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEA 253
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
KL+ M+ K PDV +YN LI+G CKA R +A+++F EM
Sbjct: 254 RKLFDVMITK-GCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 295
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/107 (39%), Positives = 64/107 (59%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G PDVVTY+ IID LCK R+ EA ++FS M+++ + PN +TY+SL+ GLC
Sbjct: 120 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 179
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EA + +EM + I P++VT++ LI+ CK +A + M
Sbjct: 180 WREASAMLNEM-MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 225
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/103 (37%), Positives = 62/103 (60%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PD+ TY+ ++DG CK G + +A +F MQS + PN Y+ L+D +CK L EA KL
Sbjct: 337 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 396
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKN 349
+SE+ V + + P+V Y ++I+G CK +A + F M ++
Sbjct: 397 FSELFV-QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEED 438
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/111 (31%), Positives = 66/111 (59%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
++ P++V YN +ID +CK ++EA +FS++ + + PN Y+++++GLCK G LDEA
Sbjct: 369 YLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 428
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRD 364
++ + M ++ P+ +YN +I G + S A ++ EM + + D
Sbjct: 429 LEAFRNM-EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 478
>ref|XP_006828912.1| hypothetical protein AMTR_s00001p00203780 [Amborella trichopoda]
gi|548833891|gb|ERM96328.1| hypothetical protein
AMTR_s00001p00203780 [Amborella trichopoda]
Length = 583
Score = 104 bits (259), Expect = 1e-20
Identities = 50/123 (40%), Positives = 81/123 (65%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
IAPDVVTY+ +I+GLC+ +I +A ++F +M R ++PN+ T+++L+DG CK G +++ +
Sbjct: 282 IAPDVVTYSVLINGLCRERKIEQACDLFDEMNERGLVPNSITFTTLIDGYCKEGNIEKGL 341
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
++Y +M +K+ + PD+VTYNSLI G CK +A ++F E+ K D Y L
Sbjct: 342 QIYQKM-MKKGLKPDLVTYNSLIYGHCKVGELKEARELFFEIRKMGLRPDKITYTTLIDG 400
Query: 395 FAK 403
F K
Sbjct: 401 FCK 403
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/104 (41%), Positives = 64/104 (61%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K + PD+VTYN +I G CK+G ++EA +F +++ + P+ TY++L+DG CK G +
Sbjct: 350 KGLKPDLVTYNSLIYGHCKVGELKEARELFFEIRKMGLRPDKITYTTLIDGFCKEGDIKA 409
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
AM++ EM VKE I D V Y +LI G + DA+K EM
Sbjct: 410 AMEIRREM-VKEGIELDNVAYTALIAGLSREGWIPDAQKALREM 452
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/121 (33%), Positives = 75/121 (61%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
P+V T+N I+ ++G+I+EA+ +F ++ +R + P+ ++++L++GLCK G L+ L
Sbjct: 214 PNVYTFNMIMHSFSRIGKIKEAQLLFREIGNRGLTPSVVSFNTLINGLCKKGDLEGGFSL 273
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKPFA 400
++V+E I PDVVTY+ LI+G C+ + A +F EM++ + +S + L +
Sbjct: 274 -KRLMVEEGIAPDVVTYSVLINGLCRERKIEQACDLFDEMNERGLVPNSITFTTLIDGYC 332
Query: 401 K 403
K
Sbjct: 333 K 333
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/122 (35%), Positives = 66/122 (54%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ + + P+ +T+ +IDG CK G I + ++ M + + P+ TY+SL+ G CK G
Sbjct: 312 MNERGLVPNSITFTTLIDGYCKEGNIEKGLQIYQKMMKKGLKPDLVTYNSLIYGHCKVGE 371
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYC 379
L EA +L+ E + K + PD +TY +LIDG CK A +I EM K D+ Y
Sbjct: 372 LKEARELFFE-IRKMGLRPDKITYTTLIDGFCKEGDIKAAMEIRREMVKEGIELDNVAYT 430
Query: 380 CL 385
L
Sbjct: 431 AL 432
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PDV TY +IDG C+ G + + +M+ ++P TY+ L++GLCK G + A
Sbjct: 457 LTPDVATYTMVIDGYCRRGDVMMGFKLLEEMKINGIVPGVITYNVLMNGLCKQGQMKNAG 516
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAE 337
L + M + I PD VTYN L+DG C++ + K+ E
Sbjct: 517 MLLNAM-LNLGIAPDDVTYNILLDGRCRSEGSKELVKLRGE 556
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/105 (35%), Positives = 58/105 (55%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PD +TY +IDG CK G I+ A + +M + + Y++L+ GL + G++ +A
Sbjct: 387 LRPDKITYTTLIDGFCKEGDIKAAMEIRREMVKEGIELDNVAYTALIAGLSREGWIPDAQ 446
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKN 349
K EM ++E +TPDV TY +IDG C+ K+ EM N
Sbjct: 447 KALREM-LREGLTPDVATYTMVIDGYCRRGDVMMGFKLLEEMKIN 490
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/99 (33%), Positives = 52/99 (52%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D V Y +I GL + G I +A+ +M + P+ TY+ ++DG C+ G + KL
Sbjct: 425 DNVAYTALIAGLSREGWIPDAQKALREMLREGLTPDVATYTMVIDGYCRRGDVMMGFKLL 484
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EM + I P V+TYN L++G CK + +A + M
Sbjct: 485 EEMKING-IVPGVITYNVLMNGLCKQGQMKNAGMLLNAM 522
>ref|XP_006300886.1| hypothetical protein CARUB_v10019976mg [Capsella rubella]
gi|482569596|gb|EOA33784.1| hypothetical protein
CARUB_v10019976mg [Capsella rubella]
Length = 622
Score = 104 bits (259), Expect = 1e-20
Identities = 47/116 (40%), Positives = 77/116 (66%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
+ I+PD+ T+N +I+ K G+ EAE +++DM SR ++PNT TY+S+VDG CKH LD+
Sbjct: 322 RQISPDIFTFNALINASVKEGKFTEAEELYADMLSRGIVPNTVTYNSMVDGFCKHNRLDD 381
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
A +++ +++ + +P+VVT+N+LI GCC A D K+ EM + + D+ Y
Sbjct: 382 ANRMF-DLMASKGCSPNVVTFNTLIHGCCMAKMVDDGMKLLREMSRRGLVADTISY 436
Score = 91.3 bits (225), Expect = 1e-16
Identities = 39/107 (36%), Positives = 72/107 (67%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ HI D+V YN IID LCK G+ +A+N+F++M+ + + P+ TY+ ++D C G
Sbjct: 249 MDESHIKADLVIYNPIIDRLCKEGKHSDAQNLFTEMREKGIFPSVVTYNCMIDASCSSGR 308
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+A +L +M ++ +I+PD+ T+N+LI+ K +F++AE+++A+M
Sbjct: 309 WSDAERLLRDM-IERQISPDIFTFNALINASVKEGKFTEAEELYADM 354
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/107 (33%), Positives = 70/107 (65%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+ + + D ++YN +I GLC++G++ A+++F +M S+ V P+T T + L+ G C++G
Sbjct: 424 MSRRGLVADTISYNTLIHGLCQVGKLNAAQDLFREMTSQGVYPDTITCNILLYGFCENGK 483
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
L++A++++ E++ K +I D TYN +I G CK N+ +A +F +
Sbjct: 484 LEDALEMF-EVIQKSKIDLDTATYNIIIHGMCKGNKVDEAWDLFCSL 529
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/115 (36%), Positives = 64/115 (55%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
P+VVT+ +++GLC+ GR+ EA + M PN TY ++V+G+CK G D A+ L
Sbjct: 186 PNVVTFTTLMNGLCREGRVLEALALLDRMVKNGHGPNVVTYRTIVNGMCKMGDTDSALNL 245
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCL 385
+M + I D+V YN +ID CK + SDA+ +F EM + Y C+
Sbjct: 246 LRKM-DESHIKADLVIYNPIIDRLCKEGKHSDAQNLFTEMREKGIFPSVVTYNCM 299
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/114 (32%), Positives = 64/114 (56%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ PD +T N ++ G C+ G++ +A MF +Q + +T TY+ ++ G+CK +DEA
Sbjct: 464 VYPDTITCNILLYGFCENGKLEDALEMFEVIQKSKIDLDTATYNIIIHGMCKGNKVDEAW 523
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
L+ + + + + PDV TYN +I G C + S+A +F++M N D Y
Sbjct: 524 DLFCSLPI-DGVEPDVQTYNIMISGFCGKSAMSEANALFSKMKDNGHEPDDCTY 576
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/120 (30%), Positives = 68/120 (56%)
Frame = +2
Query: 17 MLGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHG 196
++ K +P+VVT+N +I G C + + + +M R ++ +T +Y++L+ GLC+ G
Sbjct: 388 LMASKGCSPNVVTFNTLIHGCCMAKMVDDGMKLLREMSRRGLVADTISYNTLIHGLCQVG 447
Query: 197 FLDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
L+ A L+ EM + + PD +T N L+ G C+ + DA ++F + K+K D+ Y
Sbjct: 448 KLNAAQDLFREM-TSQGVYPDTITCNILLYGFCENGKLEDALEMFEVIQKSKIDLDTATY 506
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/99 (35%), Positives = 54/99 (54%)
Frame = +2
Query: 44 DVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKLY 223
D TYN II G+CK ++ EA ++F + V P+ TY+ ++ G C + EA L+
Sbjct: 502 DTATYNIIIHGMCKGNKVDEAWDLFCSLPIDGVEPDVQTYNIMISGFCGKSAMSEANALF 561
Query: 224 SEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
S+M PD TYN+LI GC +A + + ++ EM
Sbjct: 562 SKMKDNGH-EPDDCTYNTLIRGCLRAGEIAASGELVKEM 599
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
P +VT++ ++ G C RI EA + M PN T+++L++GLC+ G + EA+ L
Sbjct: 151 PTIVTFSTLLHGFCLEDRISEAVALSDRMAETGCTPNVVTFTTLMNGLCREGRVLEALAL 210
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIY 376
M VK P+VVTY ++++G CK A + +M ++ D IY
Sbjct: 211 LDRM-VKNGHGPNVVTYRTIVNGMCKMGDTDSALNLLRKMDESHIKADLVIY 261
>ref|XP_002338159.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 104 bits (259), Expect = 1e-20
Identities = 47/105 (44%), Positives = 72/105 (68%)
Frame = +2
Query: 26 HKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLD 205
H+ + PD+V+YN +IDGLC+LGR+REA ++F +M + LP+ TYS L+DG CK G+L
Sbjct: 213 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 272
Query: 206 EAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+A +L+ M + P++V YN LID CK+ +A K+F+E+
Sbjct: 273 KAFRLFRAM-QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/123 (34%), Positives = 72/123 (58%)
Frame = +2
Query: 35 IAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAM 214
+ P+VVTY+ +++G + EA +F M ++ P+ ++Y+ L++G CK + EA
Sbjct: 146 VEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 205
Query: 215 KLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEMHKNKELRDSWIYCCLNKP 394
+L++EM + + +TPD+V+YN+LIDG C+ R +A +F M N L D Y L
Sbjct: 206 QLFNEM-IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 264
Query: 395 FAK 403
F K
Sbjct: 265 FCK 267
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PDV TY II+GLCK+G A +F M P+ TYS+++D LCK ++EA+ +
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 221 YSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
+S M K I+P++ TYNSLI G C +R+ +A + EM
Sbjct: 68 FSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEM 106
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/104 (39%), Positives = 65/104 (62%)
Frame = +2
Query: 29 KHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDE 208
K PDV +YN +I+G CK RI EA+ +F++M + + P+ +Y++L+DGLC+ G L E
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238
Query: 209 AMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
A L+ M+ + PD+ TY+ L+DG CK + A ++F M
Sbjct: 239 AHDLFKNMLTNGNL-PDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/103 (40%), Positives = 62/103 (60%)
Frame = +2
Query: 32 HIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEA 211
+I P++VT++ +I+ CK G + EA + M V PN TYSSL++G + EA
Sbjct: 110 NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEA 169
Query: 212 MKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
KL+ M+ K PDV +YN LI+G CKA R +A+++F EM
Sbjct: 170 RKLFDVMITK-GCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 211
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/107 (39%), Positives = 64/107 (59%)
Frame = +2
Query: 20 LGHKHIAPDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGF 199
+G PDVVTY+ IID LCK R+ EA ++FS M+++ + PN +TY+SL+ GLC
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 200 LDEAMKLYSEMVVKEEITPDVVTYNSLIDGCCKANRFSDAEKIFAEM 340
EA + +EM + I P++VT++ LI+ CK +A + M
Sbjct: 96 WREASAMLNEM-MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 141
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 41 PDVVTYNYIIDGLCKLGRIREAENMFSDMQSRNVLPNTWTYSSLVDGLCKHGFLDEAMKL 220
PD+ TY+ ++DG CK G + +A +F MQS + PN Y+ L+D +CK L EA KL
Sbjct: 253 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 312
Query: 221 YSEMVVK 241
+SE+ V+
Sbjct: 313 FSELFVQ 319