BLASTX nr result

ID: Ephedra25_contig00014133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00014133
         (812 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16251.1| unknown [Picea sitchensis]                              69   4e-16

>gb|ABR16251.1| unknown [Picea sitchensis]
          Length = 672

 Score = 69.3 bits (168), Expect(2) = 4e-16
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = +1

Query: 1   DDSNSGWVWLDHWMSLYPCSSYERKASKPANVEHNRAHKGLASHETESDRTKRSSRRTHN 180
           DDS+SGWVWL+ WMS  P SS   + S  +N+   +  + + S E E  R KRS R+  +
Sbjct: 271 DDSDSGWVWLERWMSAQPWSS-SGQTSTSSNLRSQKISENVPSTELEVGRPKRSMRKVPS 329

Query: 181 ISSHDNSSNQHDFEPEKPKRGV 246
            S+ ++ SNQ D E EKPKRG+
Sbjct: 330 -STQEHISNQLDMESEKPKRGL 350



 Score = 42.4 bits (98), Expect(2) = 4e-16
 Identities = 18/44 (40%), Positives = 31/44 (70%)
 Frame = +2

Query: 269 ANQAEHESEKPKRTIKKASSTTYEVIFEQLEFEAEKIKRRMKKI 400
           ++Q E E+EKPKR  +K  ++  + + +Q E EAEK+KR ++K+
Sbjct: 362 SDQPEVEAEKPKRNFRKGLNSAPDSVTDQHEVEAEKVKRNLRKV 405



 Score = 54.7 bits (130), Expect(2) = 4e-12
 Identities = 27/74 (36%), Positives = 47/74 (63%)
 Frame = +3

Query: 453 EKIKRSLRKVSNSVLEAQAIEKAETMDLEKAKRNVNKSSTTTPDPAQDRTIVESELPK*S 632
           EK+KR+LRKVS+ ++E   + +   +++EK KR++ K S +T D   D   VE+E+PK +
Sbjct: 396 EKVKRNLRKVSHPMVEY--VSEQPEVEIEKVKRSIRKVSNSTVDSVSDHLEVETEMPKRN 453

Query: 633 IKKAPSAMSDPVSE 674
           ++K      D +S+
Sbjct: 454 LRKVSKPTLDTISD 467



 Score = 43.5 bits (101), Expect(2) = 4e-12
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = +2

Query: 227 RSQRE--ESVCEHIPDANQAEHESEKPKRTIKKASSTTYEVIFEQLEFEAEKIKRRMKK 397
           RS R+   S  EHI  +NQ + ESEKPKR ++K   +  + + +Q E EAEK KR  +K
Sbjct: 322 RSMRKVPSSTQEHI--SNQLDMESEKPKRGLRKVLKSAVDSVSDQPEVEAEKPKRNFRK 378



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
 Frame = +3

Query: 273 TRQSMNLRSQRGLSKRLPAQPMRLFLNNLSLKPRKLKGA*KRFRASSFGLHNIRTS*N*M 452
           T  S NLRSQ+ +S+ +P+  + +     S+  RK+  + +   ++   + +        
Sbjct: 295 TSTSSNLRSQK-ISENVPSTELEVGRPKRSM--RKVPSSTQEHISNQLDMES-------- 343

Query: 453 EKIKRSLRKVSNSVLEAQAIEKAETMDLEKAKRNVNKSSTTTPDPAQDRTIVESELPK*S 632
           EK KR LRKV  S +++  +     ++ EK KRN  K   + PD   D+  VE+E  K +
Sbjct: 344 EKPKRGLRKVLKSAVDS--VSDQPEVEAEKPKRNFRKGLNSAPDSVTDQHEVEAEKVKRN 401

Query: 633 IKKAPSAMSDPVSENALVEPEASKRGLKKVSNVS----DEHHQMEIEVPK 770
           ++K    M + VSE   VE E  KR ++KVSN +     +H ++E E+PK
Sbjct: 402 LRKVSHPMVEYVSEQPEVEIEKVKRSIRKVSNSTVDSVSDHLEVETEMPK 451


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