BLASTX nr result
ID: Ephedra25_contig00014027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00014027
(1328 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519964.1| photosystem I assembly protein Ycf4 (chlorop... 324 6e-86
ref|YP_001876587.1| photosystem I assembly protein ycf4 [Welwits... 265 3e-68
ref|YP_002519965.1| putative heme-binding protein (chloroplast) ... 258 5e-66
ref|YP_008082205.1| photosystem I assembly protein Ycf4 (chlorop... 249 2e-63
dbj|BAN16921.1| photosystem I assembly protein Ycf4 (chloroplast... 249 2e-63
ref|YP_002905092.1| photosystem I assembly protein ycf4 [Picea s... 221 7e-55
gb|ACP50778.1| photosystem I assembly protein ycf4 [Pinus ponder... 219 2e-54
ref|YP_004891736.1| photosystem I assembly protein Ycf4 (chlorop... 218 5e-54
ref|YP_003934196.1| photosystem I assembly protein Ycf4 [Cedrus ... 218 5e-54
ref|YP_008965225.1| photosystem I assembly protein Ycf4 (chlorop... 217 1e-53
gb|AET48471.1| photosystem I assembly protein ycf4 (chloroplast)... 216 1e-53
ref|YP_004276385.1| photosystem I assembly protein ycf4 [Pinus n... 216 1e-53
ref|YP_001806632.1| photosystem I assembly protein Ycf4 [Cryptom... 216 1e-53
ref|YP_008965041.1| photosystem I assembly protein Ycf4 (chlorop... 215 3e-53
ref|YP_008082143.1| photosystem I assembly protein ycf4 (chlorop... 215 4e-53
ref|YP_004891527.1| photosystem I assembly protein Ycf4 (chlorop... 215 4e-53
ref|YP_002905154.1| photosystem I assembly protein ycf4 [Pinus c... 215 4e-53
gb|AET46032.1| photosystem I assembly protein ycf4 (chloroplast)... 214 5e-53
ref|YP_004276315.1| photosystem I assembly protein ycf4 [Pinus m... 214 7e-53
ref|NP_042405.1| photosystem I assembly protein Ycf4 [Pinus thun... 214 8e-53
>ref|YP_002519964.1| photosystem I assembly protein Ycf4 (chloroplast) [Ephedra
equisetina] gi|220983565|dbj|BAH11332.1| photosystem I
assembly protein Ycf4 (chloroplast) [Ephedra equisetina]
Length = 185
Score = 324 bits (830), Expect = 6e-86
Identities = 165/187 (88%), Positives = 165/187 (88%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MNHQSKRLWIESIQGSRRKSN SYLGRNLIPLLFFE KIL
Sbjct: 1 MNHQSKRLWIESIQGSRRKSNFLFASVLFAGALGFFLVGFSSYLGRNLIPLLFFE--KIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL
Sbjct: 59 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL
Sbjct: 119 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 178
Query: 535 RVSIEGV 515
RVSIEGV
Sbjct: 179 RVSIEGV 185
>ref|YP_001876587.1| photosystem I assembly protein ycf4 [Welwitschia mirabilis]
gi|254814033|sp|B2Y1X0.1|YCF4_WELMI RecName:
Full=Photosystem I assembly protein Ycf4
gi|163311642|gb|ABY26800.1| photosystem I assembly
protein ycf4 [Welwitschia mirabilis]
gi|220983449|dbj|BAH11218.1| photosystem I assembly
protein Ycf4 (chloroplast) [Welwitschia mirabilis]
Length = 185
Score = 265 bits (677), Expect = 3e-68
Identities = 129/186 (69%), Positives = 149/186 (80%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN+QSKRLWIE IQGSRRKSN SYLGRNL+PLL ++I+
Sbjct: 1 MNNQSKRLWIEPIQGSRRKSNFFFASILFGGALGFFLVGFSSYLGRNLLPLL--SSQQII 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLFFS Y WCTIFF+VGSGYNQIDEK GI+CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFFSSYLWCTIFFNVGSGYNQIDEKTGIVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++NV MI M+VQ++LFSS H+LYMKV+GLPDIPLARTGE ++ KEMEQKA ELARFL
Sbjct: 119 RFPLKNVHMIKMEVQENLFSSRHILYMKVKGLPDIPLARTGENLNLKEMEQKAAELARFL 178
Query: 535 RVSIEG 518
VSIEG
Sbjct: 179 HVSIEG 184
>ref|YP_002519965.1| putative heme-binding protein (chloroplast) [Ephedra equisetina]
gi|220983566|dbj|BAH11333.1| putative heme-binding
protein (chloroplast) [Ephedra equisetina]
Length = 251
Score = 258 bits (658), Expect = 5e-66
Identities = 128/129 (99%), Positives = 128/129 (99%)
Frame = -2
Query: 388 MNKSSSLVIHHIEVTQNRAAVSLRYVACFIVLPCLISISLEKCVESWVTFWWNTSSSKIL 209
MNKSSSLVIHHIEVTQNRAAVSLRYVACFIVLPCLISISLEKCVESWVTFWWNTSSSKIL
Sbjct: 20 MNKSSSLVIHHIEVTQNRAAVSLRYVACFIVLPCLISISLEKCVESWVTFWWNTSSSKIL 79
Query: 208 DYLQEENNLVRVSQIEELLLFETTVEDFSETHLKKNFLFELYKKDCIQIVTHLGTNLLEF 29
DYLQEENNLVRVSQIEELLLFETTVEDFSETHLKKNFLFELYKKDCIQIVTHLGTNLLEF
Sbjct: 80 DYLQEENNLVRVSQIEELLLFETTVEDFSETHLKKNFLFELYKKDCIQIVTHLGTNLLEF 139
Query: 28 IILSTFFFM 2
IILSTF FM
Sbjct: 140 IILSTFLFM 148
>ref|YP_008082205.1| photosystem I assembly protein Ycf4 (chloroplast) [Gnetum montanum]
gi|490345030|gb|AGL11050.1| photosystem I assembly
protein Ycf4 (chloroplast) [Gnetum montanum]
Length = 188
Score = 249 bits (635), Expect = 2e-63
Identities = 123/189 (65%), Positives = 142/189 (75%)
Frame = -2
Query: 1084 MTYMNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIE 905
M MNHQ+KRLWIE I+GSRRKSN SY+GRNL+P L
Sbjct: 1 MISMNHQAKRLWIEPIKGSRRKSNFFFASIILGGALGFLLVGFSSYIGRNLVPPLLSH-- 58
Query: 904 KILFIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRR 725
+ILF+PQGI+MCFYGIAGLFFS Y WCTI F+VG GYN+IDEKKGI+C FRWGFPG+ RR
Sbjct: 59 QILFVPQGIVMCFYGIAGLFFSSYLWCTILFNVGGGYNKIDEKKGILCFFRWGFPGKNRR 118
Query: 724 VYLRFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELA 545
V+LR ++NVQ I M+VQ+SLF S HVLYMKV+GLPDIPLARTG+ + EMEQKA ELA
Sbjct: 119 VFLRVPLKNVQTIKMEVQESLFYSRHVLYMKVKGLPDIPLARTGDHFNLSEMEQKAAELA 178
Query: 544 RFLRVSIEG 518
FLRVSIEG
Sbjct: 179 HFLRVSIEG 187
>dbj|BAN16921.1| photosystem I assembly protein Ycf4 (chloroplast) [Gnetum ula]
Length = 188
Score = 249 bits (635), Expect = 2e-63
Identities = 123/189 (65%), Positives = 142/189 (75%)
Frame = -2
Query: 1084 MTYMNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIE 905
M MNHQ+KRLWIE I+GSRRKSN SY+GRNL+P L
Sbjct: 1 MISMNHQAKRLWIEPIKGSRRKSNLFFASIILGGALGFLLVGFSSYIGRNLVPPLLSH-- 58
Query: 904 KILFIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRR 725
+ILF+PQGI+MCFYGIAGLFFS Y WCTI F+VG GYN+IDEKKGI+C FRWGFPG+ RR
Sbjct: 59 QILFVPQGIVMCFYGIAGLFFSSYLWCTILFNVGGGYNKIDEKKGILCFFRWGFPGKNRR 118
Query: 724 VYLRFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELA 545
V+LR ++NVQ I M+VQ+SLF S HVLYMKV+GLPDIPLARTG+ + EMEQKA ELA
Sbjct: 119 VFLRVPLKNVQTIKMEVQESLFYSRHVLYMKVKGLPDIPLARTGDHFNLSEMEQKAAELA 178
Query: 544 RFLRVSIEG 518
FLRVSIEG
Sbjct: 179 HFLRVSIEG 187
>ref|YP_002905092.1| photosystem I assembly protein ycf4 [Picea sitchensis]
gi|523420642|ref|YP_008082816.1| photosystem I assembly
protein Ycf4 (chloroplast) [Picea abies]
gi|226875302|gb|ACO89041.1| photosystem I assembly
protein ycf4 [Picea sitchensis]
gi|502524850|emb|CCW23100.1| photosystem I assembly
protein Ycf4 (chloroplast) [Picea abies]
Length = 184
Score = 221 bits (562), Expect = 7e-55
Identities = 107/186 (57%), Positives = 138/186 (74%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN++SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNNRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQEIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI FDVGSGYN+ D++KGI+CLFRWGFPG+ RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFDVGSGYNKFDKRKGIVCLFRWGFPGKNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPLARTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLARTGDNLNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>gb|ACP50778.1| photosystem I assembly protein ycf4 [Pinus ponderosa]
Length = 184
Score = 219 bits (559), Expect = 2e-54
Identities = 107/186 (57%), Positives = 136/186 (73%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_004891736.1| photosystem I assembly protein Ycf4 (chloroplast) [Picea
morrisonicola] gi|347977517|dbj|BAK86474.1| photosystem I
assembly protein Ycf4 (chloroplast) [Picea morrisonicola]
Length = 184
Score = 218 bits (555), Expect = 5e-54
Identities = 106/186 (56%), Positives = 137/186 (73%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN++SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNNRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQEIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI FDVGSGYN+ D++KGI+CLFRWGFPG+ RR++
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFDVGSGYNKFDKRKGIVCLFRWGFPGKNRRIFP 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPLARTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLARTGDNLNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_003934196.1| photosystem I assembly protein Ycf4 [Cedrus deodara]
gi|228017083|gb|ACP51905.1| photosystem I assembly
protein ycf4 [Cedrus deodara]
gi|307683271|dbj|BAJ19579.1| photosystem I assembly
protein Ycf4 (chloroplast) [Cedrus deodara]
Length = 184
Score = 218 bits (555), Expect = 5e-54
Identities = 108/186 (58%), Positives = 135/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN QSK LWIE I GSR++SN SY G +LIPLL ++IL
Sbjct: 1 MNRQSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGEDLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
FIPQGI+MCFYGIAGLF S Y WCTI FDVGSGYN+ D++KGI+CLFRWGFPGR RR++L
Sbjct: 59 FIPQGIVMCFYGIAGLFISSYLWCTILFDVGSGYNKFDKRKGIVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI +VQ+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKTEVQEGI-SPRRVLYMEIKGRQDIPLTRTGDNLNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_008965225.1| photosystem I assembly protein Ycf4 (chloroplast) [Calocedrus
formosana] gi|482841053|dbj|BAN16987.1| photosystem I
assembly protein Ycf4 (chloroplast) [Calocedrus
formosana] gi|563317811|dbj|BAO19909.1| photosystem I
assembly protein Ycf4 (chloroplast) [Calocedrus
formosana]
Length = 184
Score = 217 bits (552), Expect = 1e-53
Identities = 108/186 (58%), Positives = 135/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I+GSR+ SN SYLGRNLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPIKGSRKISNFFFACLLFLGSLGFFVVGISSYLGRNLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI +VGSGYN+ DEK+G++CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILCNVGSGYNKFDEKEGVVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++Q I M+VQ+ +F V+YM+++G DIPL RT E + +EMEQKA ELARFL
Sbjct: 119 RFLMKDIQAIKMEVQEGIF-PRRVIYMEIKGQQDIPLTRTEENLTLREMEQKAAELARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>gb|AET48471.1| photosystem I assembly protein ycf4 (chloroplast) [Pinus glabra]
Length = 184
Score = 216 bits (551), Expect = 1e-53
Identities = 107/186 (57%), Positives = 136/186 (73%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGXLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_004276385.1| photosystem I assembly protein ycf4 [Pinus nelsonii]
gi|228016832|gb|ACP51658.1| photosystem I assembly
protein ycf4 [Pinus attenuata]
gi|323522703|gb|ADX94951.1| photosystem I assembly
protein ycf4 [Pinus nelsonii] gi|356999226|gb|AET47107.1|
photosystem I assembly protein ycf4 (chloroplast) [Pinus
muricata] gi|357000536|gb|AET48399.1| photosystem I
assembly protein ycf4 (chloroplast) [Pinus greggii]
gi|357001123|gb|AET48978.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus hartwegii]
Length = 184
Score = 216 bits (551), Expect = 1e-53
Identities = 106/186 (56%), Positives = 135/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_001806632.1| photosystem I assembly protein Ycf4 [Cryptomeria japonica]
gi|171854890|dbj|BAG16630.1| photosystem I assembly
protein ycf4 [Cryptomeria japonica]
gi|239794259|dbj|BAH73256.1| photosystem I assembly
protein ycf4 [Cryptomeria japonica]
gi|239794341|dbj|BAH73337.1| photosystem I assembly
protein ycf4 [Cryptomeria japonica]
Length = 184
Score = 216 bits (551), Expect = 1e-53
Identities = 109/186 (58%), Positives = 134/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR+ SN SYLGRNLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKISNFFFACLLFLGSLGFFVVGISSYLGRNLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI +VGSGYN+ DEK+G++CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILCNVGSGYNKFDEKEGVVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
+F ++++Q I M+VQ+ LF VLYM+++G DIPL RT E + +EMEQKA ELARFL
Sbjct: 119 QFRMKDIQAIKMEVQEGLF-PRRVLYMEIKGQQDIPLTRTEENLTLREMEQKAAELARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_008965041.1| photosystem I assembly protein Ycf4 (chloroplast) [Agathis dammara]
gi|347977310|dbj|BAK86772.1| photosystem I assembly
protein Ycf4 (chloroplast) [Agathis dammara]
gi|354991255|gb|AER45501.1| ycf4 (chloroplast) [Agathis
australis] gi|563317625|dbj|BAO19725.1| photosystem I
assembly protein Ycf4 (chloroplast) [Agathis dammara]
Length = 184
Score = 215 bits (548), Expect = 3e-53
Identities = 110/186 (59%), Positives = 133/186 (71%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR+ SN SYLGRNLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKMSNFFWACILFLGSLGFFLVGISSYLGRNLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
FIPQGI+MCFYGIAGLF S Y WCTI +VGSGYN+ DEK+GI+CLFRWGFPGR RR++L
Sbjct: 59 FIPQGIVMCFYGIAGLFISSYLWCTILCNVGSGYNKFDEKEGIVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
+F I+++Q I M+VQ+ LF VLYM+++G +IPL RT + +EMEQKA ELARFL
Sbjct: 119 QFLIKDIQAIKMEVQEGLF-PRRVLYMEIKGQQEIPLTRTEDNFTLREMEQKAAELARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_008082143.1| photosystem I assembly protein ycf4 (chloroplast) [Cunninghamia
lanceolata] gi|490344960|gb|AGL10989.1| photosystem I
assembly protein ycf4 (chloroplast) [Cunninghamia
lanceolata]
Length = 184
Score = 215 bits (547), Expect = 4e-53
Identities = 107/186 (57%), Positives = 133/186 (71%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR+ SN SYLGRNLIP F ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKMSNFFFACLLFFGSLGFFVVGISSYLGRNLIP--FLSSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGI+GLF S Y WCTI +VGSGYN+ DEK+G++CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGISGLFISSYLWCTILCNVGSGYNKFDEKEGVVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
+F ++++Q I M+VQ+ LF VLYM+++G DIPL RT E + +EMEQKA ELARFL
Sbjct: 119 QFLMKDIQAIKMEVQEGLF-PRRVLYMEIKGQQDIPLTRTEENLTLREMEQKAAELARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_004891527.1| photosystem I assembly protein Ycf4 (chloroplast) [Taiwania
cryptomerioides] gi|512721829|ref|YP_008082444.1|
photosystem I assembly protein Ycf4 (chloroplast)
[Taiwania flousiana] gi|347977429|dbj|BAK86860.1|
photosystem I assembly protein Ycf4 (chloroplast)
[Taiwania cryptomerioides] gi|490345302|gb|AGL11290.1|
photosystem I assembly protein Ycf4 (chloroplast)
[Taiwania flousiana]
Length = 184
Score = 215 bits (547), Expect = 4e-53
Identities = 107/186 (57%), Positives = 135/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR+ SN SYLGRNLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKISNFFFACLLFLGSLGFFVVGISSYLGRNLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTIF +VGSGYN+ DEK+G++CLFRWGFPGR RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTIFCNVGSGYNKFDEKEGVVCLFRWGFPGRNRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
+F ++++Q I M+VQ+ +F VLY++++G DIPL RT + + +EMEQKA ELARFL
Sbjct: 119 QFLMKDIQAIKMEVQEGIF-PRRVLYIEIKGQQDIPLTRTEQNLTLREMEQKAAELARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_002905154.1| photosystem I assembly protein ycf4 [Pinus contorta]
gi|226875365|gb|ACO89103.1| photosystem I assembly
protein ycf4 [Pinus contorta]
Length = 184
Score = 215 bits (547), Expect = 4e-53
Identities = 105/186 (56%), Positives = 135/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++L
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFL 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF +++++MI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIRMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>gb|AET46032.1| photosystem I assembly protein ycf4 (chloroplast) [Pinus radiata]
Length = 184
Score = 214 bits (546), Expect = 5e-53
Identities = 105/186 (56%), Positives = 134/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFX 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|YP_004276315.1| photosystem I assembly protein ycf4 [Pinus monophylla]
gi|228016704|gb|ACP51532.1| photosystem I assembly
protein ycf4 [Pinus aristata] gi|323522539|gb|ADX94881.1|
photosystem I assembly protein ycf4 [Pinus monophylla]
gi|356998209|gb|AET46104.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus quadrifolia]
gi|356998788|gb|AET46675.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus pinceana]
gi|356999516|gb|AET47393.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus maximartinezii]
gi|357000100|gb|AET47969.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus johannis]
gi|357000901|gb|AET48759.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus edulis]
Length = 184
Score = 214 bits (545), Expect = 7e-53
Identities = 105/186 (56%), Positives = 134/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFS 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183
>ref|NP_042405.1| photosystem I assembly protein Ycf4 [Pinus thunbergii]
gi|512721654|ref|YP_008082272.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus massoniana]
gi|512721728|ref|YP_008082345.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus taeda]
gi|1175646|sp|P41620.1|YCF4_PINTH RecName:
Full=Photosystem I assembly protein Ycf4
gi|1262645|dbj|BAA04362.1| ORF184 [Pinus thunbergii]
gi|228016007|gb|ACP50846.1| photosystem I assembly
protein ycf4 [Pinus resinosa] gi|228016320|gb|ACP51154.1|
photosystem I assembly protein ycf4 [Pinus taeda]
gi|228016391|gb|ACP51224.1| photosystem I assembly
protein ycf4 [Pinus thunbergii]
gi|228016458|gb|ACP51290.1| photosystem I assembly
protein ycf4 [Pinus torreyana subsp. insularis]
gi|228016522|gb|ACP51353.1| photosystem I assembly
protein ycf4 [Pinus torreyana subsp. torreyana]
gi|228017021|gb|ACP51844.1| photosystem I assembly
protein ycf4 [Pinus canariensis]
gi|228017196|gb|ACP52016.1| photosystem I assembly
protein ycf4 [Pinus leiophylla var. chihuahuana]
gi|228017459|gb|ACP52275.1| photosystem I assembly
protein ycf4 [Pinus merkusii] gi|228017713|gb|ACP52525.1|
photosystem I assembly protein ycf4 [Pinus pinaster]
gi|356996541|gb|AET44459.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus leiophylla var.
chihuahuana] gi|356996760|gb|AET44675.1| photosystem I
assembly protein ycf4 (chloroplast) [Pinus caribaea]
gi|356996905|gb|AET44818.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus brutia]
gi|356996977|gb|AET44889.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus arizonica]
gi|356997122|gb|AET45032.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus yunnanensis]
gi|356997192|gb|AET45101.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus yecorensis]
gi|356997481|gb|AET45386.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus tropicalis]
gi|356997627|gb|AET45530.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus sylvestris]
gi|356997917|gb|AET45816.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus roxburghii]
gi|356997990|gb|AET45888.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus rigida]
gi|356998282|gb|AET46176.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus pungens]
gi|356998569|gb|AET46459.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus ponderosa var.
scopulorum] gi|356998642|gb|AET46531.1| photosystem I
assembly protein ycf4 (chloroplast) [Pinus ponderosa var.
benthamiana] gi|356998715|gb|AET46603.1| photosystem I
assembly protein ycf4 (chloroplast) [Pinus pinea]
gi|356998934|gb|AET46819.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus palustris]
gi|356999007|gb|AET46891.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus occidentalis]
gi|356999080|gb|AET46963.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus pseudostrobus var.
apulcensis] gi|356999153|gb|AET47035.1| photosystem I
assembly protein ycf4 (chloroplast) [Pinus nigra]
gi|356999298|gb|AET47178.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus mugo]
gi|356999443|gb|AET47321.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus montezumae]
gi|356999589|gb|AET47465.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus massoniana]
gi|356999662|gb|AET47537.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus lumholtzii]
gi|356999735|gb|AET47609.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus leiophylla]
gi|356999808|gb|AET47681.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus lawsonii]
gi|356999881|gb|AET47753.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus pringlei]
gi|356999954|gb|AET47825.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus latteri]
gi|357000027|gb|AET47897.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus kesiya]
gi|357000173|gb|AET48041.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus jeffreyi]
gi|357000246|gb|AET48113.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus hwangshanensis]
gi|357000319|gb|AET48185.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus heldreichii]
gi|357000391|gb|AET48256.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus hartwegii]
gi|357000464|gb|AET48328.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus halepensis]
gi|357000682|gb|AET48543.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus fragilissima]
gi|357000755|gb|AET48615.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus engelmannii]
gi|357000828|gb|AET48687.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus elliottii]
gi|357000974|gb|AET48831.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus echinata]
gi|357001048|gb|AET48904.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus douglasiana]
gi|357001269|gb|AET49122.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus devoniana]
gi|357001342|gb|AET49194.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus densata]
gi|357001702|gb|AET49549.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus cubensis]
gi|357001848|gb|AET49693.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus arizonica var. cooperi]
gi|490345116|gb|AGL11118.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus massoniana]
gi|490345198|gb|AGL11191.1| photosystem I assembly
protein ycf4 (chloroplast) [Pinus taeda]
Length = 184
Score = 214 bits (544), Expect = 8e-53
Identities = 105/186 (56%), Positives = 134/186 (72%)
Frame = -2
Query: 1075 MNHQSKRLWIESIQGSRRKSNXXXXXXXXXXXXXXXXXXXXSYLGRNLIPLLFFEIEKIL 896
MN +SK LWIE I GSR++SN SY G NLIPLL ++IL
Sbjct: 1 MNRRSKWLWIEPITGSRKRSNFFWACILFLGSLGFFLVGISSYFGENLIPLL--SSQQIL 58
Query: 895 FIPQGIIMCFYGIAGLFFSFYFWCTIFFDVGSGYNQIDEKKGIICLFRWGFPGRTRRVYL 716
F+PQGI+MCFYGIAGLF S Y WCTI F+VGSGYN+ D+KKGI+CLFRWGFPG RR++
Sbjct: 59 FVPQGIVMCFYGIAGLFISSYLWCTILFNVGSGYNKFDKKKGIVCLFRWGFPGINRRIFP 118
Query: 715 RFSIENVQMITMQVQKSLFSSHHVLYMKVRGLPDIPLARTGEKIHQKEMEQKAVELARFL 536
RF ++++QMI M++Q+ + S VLYM+++G DIPL RTG+ ++ +E+EQKA E ARFL
Sbjct: 119 RFLMKDIQMIKMEIQEGI-SPRRVLYMEIKGRQDIPLTRTGDNVNLREIEQKAAESARFL 177
Query: 535 RVSIEG 518
RVSIEG
Sbjct: 178 RVSIEG 183