BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013997
         (1256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi...   164   5e-38
ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi...   160   1e-36
gb|EJY79714.1| UBA/TS-N domain containing protein [Oxytricha tri...   112   3e-22
ref|XP_001306872.1| UBA/TS-N domain containing protein [Trichomo...    60   1e-06
ref|XP_006005649.1| PREDICTED: poly [ADP-ribose] polymerase 6 [L...    59   4e-06
ref|XP_783307.3| PREDICTED: poly [ADP-ribose] polymerase 6-like ...    59   5e-06

>ref|XP_001775171.1| predicted protein [Physcomitrella patens] gi|162673510|gb|EDQ60032.1|
            predicted protein [Physcomitrella patens]
          Length = 1110

 Score =  164 bits (416), Expect = 5e-38
 Identities = 116/367 (31%), Positives = 183/367 (49%), Gaps = 62/367 (16%)
 Frame = -1

Query: 917  NGENVFTDMLVYVCRSLRELRQRCVVCKKRIP-TLSPLFFCDAEFCLYQFEEERMGVSLL 741
            N +N F  + + +C  LR L  RC++C K++  +++ +  CD + CLY+FEE  +GVS+L
Sbjct: 365  NNKNPFIGLALAICHQLRLLPGRCLICWKKLSCSVTRMRTCDEDLCLYRFEELGLGVSVL 424

Query: 740  QELQNT-KLARFLIATALEASISARDVFEPFPPFLLKKKEIRKRSGFFSEAMKINKNEAT 564
             E++++ +L    ++ A  A  SARDVFEPFP FLL+ KEIR RSG+FS        E+ 
Sbjct: 425  DEVKSSPELVEVELSLAHTALESARDVFEPFPAFLLQDKEIRGRSGWFSND---TVRESA 481

Query: 563  SDSNNATH--------CNKDYKVNSNKDMELLKKLIESFPPIEEMQNCSSEIELIFKLGK 408
            S   N T          ++   + SNK+ ELL++++ S PPI+++Q C+ E  L   L +
Sbjct: 482  SKLTNLTQKMWDDLEDMDESEPLKSNKNSELLREILASIPPIDKIQKCADERSLKKVLTR 541

Query: 407  PWC-------------DPNTSSHSNTSSKEKESGKLTSNAESVSSKEFFKVEKLWDDKQW 267
             W               P  +  S   ++   S +    ++   S+   ++ ++W     
Sbjct: 542  SWYCYLYDGYKRAPHGGPVVAQVSPEMAEANPSPRPMHRSQLGGSQA--EMVEVWRKVAK 599

Query: 266  LPYNLLRFILFTNRLLMRPLPIDVELPVP------------------------------- 180
            + Y+++RFIL TNRL +  L  + E+  P                               
Sbjct: 600  MAYDVMRFILMTNRLSLYRLRSEEEVLQPKTTPKNLHGVGVGFHPMMKSKMKLNMEPKDL 659

Query: 179  ------SYFQFAIIYDA--XXXXXXXXXXXEHGSIFAFHGSAGCNWYSILRNGLRSLSQT 24
                  + +QFA+++D+              +GS FA+HGS+  NWYSILRNGLRS+S T
Sbjct: 660  HAENSVTMYQFAVLHDSPEREARFIRRREEANGSFFAYHGSSAENWYSILRNGLRSMSDT 719

Query: 23   KFMSAGA 3
             FMS GA
Sbjct: 720  AFMSTGA 726


>ref|XP_001782576.1| predicted protein [Physcomitrella patens] gi|162665896|gb|EDQ52565.1|
            predicted protein [Physcomitrella patens]
          Length = 939

 Score =  160 bits (405), Expect = 1e-36
 Identities = 120/351 (34%), Positives = 172/351 (49%), Gaps = 46/351 (13%)
 Frame = -1

Query: 917  NGENVFTDMLVYVCRSLRELRQRCVVCKKRIP-TLSPLFFCDAEFCLYQFEEERMGVSLL 741
            N +N F  + + +   L+ L Q C++C +  P +++ +  CD++ CL+ FEE  +GVS+L
Sbjct: 364  NNKNPFLGLALAISHQLKRLPQCCIICWREHPFSVTRMRTCDSDLCLHLFEELGLGVSVL 423

Query: 740  QELQNT-KLARFLIATALEASISARDVFEPFPPFLLKKKEIRKRSGFFSEAMKINKNEAT 564
             E++++ +L    +A A  A  S RDVFEPFP F L+K E+R RSG+FS     N +E  
Sbjct: 424  GEVKSSPELVEMEMAFAAAALRSKRDVFEPFPAFSLQKDELRLRSGWFSNN---NMSETA 480

Query: 563  SDSNNATHC-----------NKDYKVNSNKDMELLKKLIESFPPIEEMQNCSSEIELIFK 417
            S S N               ++   V SNK+ + L + + S PPI  +Q C+ E  L   
Sbjct: 481  SRSKNRIKTAYQMPILGAVEDEKSAVQSNKNTKQLSEALASIPPINVLQKCADERSLKRV 540

Query: 416  LGKPWCD----------------PNTSSHSNTSSKEKESGKLTSNAESVSSKEFFKVEKL 285
            L + W                  P TS  ++T +       L S     S    F+ EK+
Sbjct: 541  LARAWYSHYHEGVERAPHEGSVPPRTSHGAHTDAAPTP---LLSPLMKKSRSPRFETEKM 597

Query: 284  --WDDKQWLPYNLLRFILFTNR------------LLMRPLPIDVELPVPS-YFQFAIIYD 150
              W     L Y+L+RFIL TNR            L +   P   + P  S  +QF +++D
Sbjct: 598  EPWRKVANLAYDLMRFILTTNRGSICQVFGEDEVLKVERSPKSKDAPGESGIYQFVVLHD 657

Query: 149  AXXXXXXXXXXXEH--GSIFAFHGSAGCNWYSILRNGLRSLSQTKFMSAGA 3
            +               GS FAFHGS+G NWYSILRNGLRS+S T FMS GA
Sbjct: 658  SPERAADFDHRRRDAGGSYFAFHGSSGENWYSILRNGLRSMSYTPFMSCGA 708


>gb|EJY79714.1| UBA/TS-N domain containing protein [Oxytricha trifallax]
          Length = 1088

 Score =  112 bits (280), Expect = 3e-22
 Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 25/347 (7%)
 Frame = -1

Query: 968  VVVPEMIKEFKKGKAWWN---GENVFTDMLVYVCRSLRELRQRCVVCKKRIPTLS-PLFF 801
            ++ P ++K   K  +  N    +N    M++Y+C  L +  + C++C  ++ T S  L  
Sbjct: 449  LIEPSLVKRASKDYSIMNLPHTKNQLVRMMLYICDRLDKSTRYCILCHNQLETESIKLRA 508

Query: 800  CDAEFCLYQFEEERMGVSLLQELQNTKLARFL-IATALEASISAR--DVFEPFPPFLLKK 630
            C +E C + FEE   G ++  EL+  +   FL I+ A +A  S R   VFEPFP F L  
Sbjct: 509  CTSEHCEFIFEEN-FGGTIFPELKYNQHEAFLNISLAAKALFSTRAGSVFEPFPTFFLIS 567

Query: 629  KEIRKRSGFFSEAMKINKNEATSDSNNATHCNKDYKVN-SNKDMELLKKLIESFPP-IEE 456
             E+R + G      K     A  + N     NKD+ VN  NKD+  + ++ +  PP +  
Sbjct: 568  NELRTKRGNLDVIQK-----ARIEGNQV---NKDHMVNEKNKDLAKMLEIFQKIPPYMTL 619

Query: 455  MQNCSSEIELIFKLGKPWCDPNTSSHSNTSSKEKESGKLTSNAESVSSKEFFKVEKLWDD 276
            M++ +SE +LI KL       NT   + T +++                           
Sbjct: 620  MKDVNSEADLICKL-------NTIYKNETQARQS-------------------------- 646

Query: 275  KQWLPYNLLRFILFTNR----LLMRPLPIDVELPV-----------PSYFQFAII-YDAX 144
                 Y +L +IL TNR     L     ID+   V            ++ Q+ II  D  
Sbjct: 647  -----YKMLSYILATNRSTFVKLTEATNIDLSPGVVNNVNNGQDLSSTFEQYLIIPQDQA 701

Query: 143  XXXXXXXXXXEHGSIFAFHGSAGCNWYSILRNGLRSLSQTKFMSAGA 3
                      +HGS+F +HGS+  NWYSILRNGLR++S T  M+AGA
Sbjct: 702  KERIFRQRKKQHGSVFCWHGSSTENWYSILRNGLRNVSNTTLMTAGA 748


>ref|XP_001306872.1| UBA/TS-N domain containing protein [Trichomonas vaginalis G3]
           gi|121888470|gb|EAX93942.1| UBA/TS-N domain containing
           protein [Trichomonas vaginalis G3]
          Length = 560

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = -1

Query: 260 YNLLRFILFTNRLLMRPLPIDVEL-PVPSYFQF-AIIYDAXXXXXXXXXXXEHGSIFAFH 87
           YNL+R+IL TN+     LP  + +  + + FQF  +I              ++GS + +H
Sbjct: 345 YNLIRWILLTNKSHFLALPEGLRIREINAQFQFLTLISSTEREEEFKKLKDQYGSFYLWH 404

Query: 86  GSAGCNWYSILRNGLRSLSQTKFMSAGA 3
           GSA   WYSILRNGL++LS++  M+ GA
Sbjct: 405 GSAADRWYSILRNGLKNLSKSNIMANGA 432


>ref|XP_006005649.1| PREDICTED: poly [ADP-ribose] polymerase 6 [Latimeria chalumnae]
          Length = 609

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
 Frame = -1

Query: 428 LIFKLGKPWCDPNTSSHSNTSSKEKESGKLTSNAESVSS------KEFFKVEKLWDDKQW 267
           +IF+      DPN       + K+K   +L    +SV S        + +++K  D    
Sbjct: 331 IIFEPYPSVVDPNDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDS 390

Query: 266 LPYNLLRFILFTNRLLMRPLPIDVELP-VPSYFQFAIIYDAXXXXXXXXXXXE-HGSIFA 93
           L + LL++I+ +NR  +  LP+  +L  + +  QF ++              + HGS FA
Sbjct: 391 LAHPLLQWIISSNRSHIVKLPVSRQLKFMHTSHQFLLLSSPPAKEARFRTAKKLHGSTFA 450

Query: 92  FHGSAGCNWYSILRNGLRSLSQTKFMSAGA 3
           FHGS   NW+SILRNGL + S TK    GA
Sbjct: 451 FHGSHIENWHSILRNGLVNASYTKLQLHGA 480


>ref|XP_783307.3| PREDICTED: poly [ADP-ribose] polymerase 6-like isoform 3
           [Strongylocentrotus purpuratus]
          Length = 708

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
 Frame = -1

Query: 398 DPNTSSHSNTSSKEKESGKLTSNAESVSSK-------EFFKVEKLWDDKQWLPYNLLRFI 240
           DP +S     S K+K   +L S  +  SS            ++K  D   ++ Y LL++I
Sbjct: 449 DPKSSKELAFSPKKKNFDRLESTLDKFSSMTDMLAAGSVTDMKKQMDRMDFMAYPLLQWI 508

Query: 239 LFTNRLLMRPLPIDVELP-VPSYFQFAIIYDAXXXXXXXXXXXE-HGSIFAFHGSAGCNW 66
           + +NR  +  LP + ++  + +  QF ++              + HGSIFAFHGS   NW
Sbjct: 509 ISSNRSHIVKLPTNKQIRFMHTPHQFLLLSSTPSKEIAFRKAKQEHGSIFAFHGSNIENW 568

Query: 65  YSILRNGLRSLSQTKFMSAGA 3
           +SILR+GL + S TK    GA
Sbjct: 569 HSILRHGLINASGTKHQMHGA 589