BLASTX nr result
ID: Ephedra25_contig00013958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00013958
(1598 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not... 114 9e-23
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 114 1e-22
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 112 6e-22
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 112 6e-22
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A... 110 2e-21
gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea] 110 2e-21
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 109 3e-21
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 109 3e-21
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 109 4e-21
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 109 4e-21
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 109 4e-21
ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi... 109 4e-21
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 108 5e-21
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 108 5e-21
gb|AFK41039.1| unknown [Medicago truncatula] 108 5e-21
emb|CBI40277.3| unnamed protein product [Vitis vinifera] 108 5e-21
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 108 5e-21
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 108 5e-21
gb|ADE77570.1| unknown [Picea sitchensis] 108 6e-21
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 107 1e-20
>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 588
Score = 114 bits (286), Expect = 9e-23
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
VYVCD +AY YDDE IKKAEA+GK GL+ I KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 499 VYVCDAEAYTYDDEAIKKAEAVGKPGLVDITAKEDSFIFTVESTGAIKASQLVLNAIEIL 558
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V S DT+E D+ FG+LG HM
Sbjct: 559 KQKLDAVRPSEDTEEADDQFGELGAHM 585
>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 3-like [Citrus
sinensis] gi|557524889|gb|ESR36195.1| hypothetical
protein CICLE_v10028849mg [Citrus clementina]
Length = 319
Score = 114 bits (285), Expect = 1e-22
Identities = 58/89 (65%), Positives = 68/89 (76%)
Frame = +1
Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630
G VYV D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE
Sbjct: 228 GQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIE 287
Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717
+LK KLD V LS DT E D+ FG+LG HM
Sbjct: 288 VLKQKLDAVRLSEDTVEADDQFGELGAHM 316
>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
[Populus trichocarpa] gi|550331423|gb|EEE87820.2|
DNA-directed RNA polymerase II 36 kDa polypeptide B
family protein [Populus trichocarpa]
Length = 323
Score = 112 bits (279), Expect = 6e-22
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK+GL+ I KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 234 VVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEIL 293
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 294 KQKLDAVRLSDDTVEADDQFGELGVHM 320
>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Fragaria vesca subsp. vesca]
Length = 318
Score = 112 bits (279), Expect = 6e-22
Identities = 58/89 (65%), Positives = 67/89 (75%)
Frame = +1
Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630
G V V D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE
Sbjct: 227 GKVVVVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIE 286
Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717
ILK KLD V LS DT E D+ FG+LG HM
Sbjct: 287 ILKQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
gi|548856809|gb|ERN14637.1| hypothetical protein
AMTR_s00038p00194050 [Amborella trichopoda]
Length = 324
Score = 110 bits (275), Expect = 2e-21
Identities = 56/87 (64%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I +E SFIFTVEST A+K S+++ N IE+L
Sbjct: 233 VVVVDPEAYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVL 292
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT+E DE FG+LG HM
Sbjct: 293 KQKLDAVRLSLDTEEGDEQFGELGAHM 319
>gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea]
Length = 320
Score = 110 bits (275), Expect = 2e-21
Identities = 55/87 (63%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
VYV D +AY YD+E++KKAE MGK L+ IN KE SFIFTVE+T A+K S+++ N IEIL
Sbjct: 232 VYVADAEAYTYDEEVLKKAEGMGKARLVEINAKEDSFIFTVETTGAIKASQLLLNAIEIL 291
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS+DT E DE FG+LG HM
Sbjct: 292 KQKLDAVRLSADTVEADEQFGELGAHM 318
>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
Length = 318
Score = 109 bits (273), Expect = 3e-21
Identities = 57/87 (65%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEIL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cucumis sativus]
Length = 320
Score = 109 bits (273), Expect = 3e-21
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I +E SFIFTVEST A+K S++I N I+IL
Sbjct: 231 VMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDIL 290
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 291 KQKLDAVRLSDDTVEADDQFGELGAHM 317
>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
Length = 318
Score = 109 bits (272), Expect = 4e-21
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE+L
Sbjct: 229 VVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
[Cicer arietinum]
Length = 319
Score = 109 bits (272), Expect = 4e-21
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 230 VMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEIL 289
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 290 KQKLDAVRLSEDTVEADDQFGELGAHM 316
>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 318
Score = 109 bits (272), Expect = 4e-21
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YD+E+IKKAE+MGK GL+ I KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEIL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_001765827.1| predicted protein [Physcomitrella patens]
gi|162683004|gb|EDQ69418.1| predicted protein
[Physcomitrella patens]
Length = 324
Score = 109 bits (272), Expect = 4e-21
Identities = 56/87 (64%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YD+E++KKAEAMGK GL+ I KE SFIFTVEST A+K S+M N IEIL
Sbjct: 233 VVVVDPEAYTYDEEVLKKAEAMGKPGLVEIYSKEDSFIFTVESTGAIKASQMFLNAIEIL 292
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K+KLD V LS DT+E D+ FG+LG HM
Sbjct: 293 KSKLDAVRLSFDTEEADDQFGELGAHM 319
>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
Length = 318
Score = 108 bits (271), Expect = 5e-21
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D++AY YDDE+IKKAEAMGK GL+ I ++ SFIFTVEST A+K+S+++ N IEIL
Sbjct: 229 VMVVDSEAYSYDDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEIL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
[Medicago truncatula] gi|355508950|gb|AES90092.1|
DNA-directed RNA polymerase II subunit RPB3-A [Medicago
truncatula]
Length = 318
Score = 108 bits (271), Expect = 5e-21
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>gb|AFK41039.1| unknown [Medicago truncatula]
Length = 318
Score = 108 bits (271), Expect = 5e-21
Identities = 56/87 (64%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>emb|CBI40277.3| unnamed protein product [Vitis vinifera]
Length = 206
Score = 108 bits (271), Expect = 5e-21
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L
Sbjct: 117 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 176
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 177 KQKLDAVRLSEDTVEADDQFGELGAHM 203
>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
vinifera]
Length = 318
Score = 108 bits (271), Expect = 5e-21
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L
Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
Length = 318
Score = 108 bits (271), Expect = 5e-21
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L
Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315
>gb|ADE77570.1| unknown [Picea sitchensis]
Length = 330
Score = 108 bits (270), Expect = 6e-21
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V+V D +AY YDDE+IKKAEAMGK GL+ IN K+ SFIFT+EST ALK S+M+ N I+IL
Sbjct: 238 VFVVDAEAYSYDDEVIKKAEAMGKPGLVSINAKDDSFIFTIESTGALKASQMLLNAIDIL 297
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KL+ V LS +T+E+D F DL HM
Sbjct: 298 KQKLETVRLSPETEEDDAQFIDLEQHM 324
>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
[Solanum tuberosum]
Length = 319
Score = 107 bits (268), Expect = 1e-20
Identities = 53/87 (60%), Positives = 67/87 (77%)
Frame = +1
Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
V V D +AY YDDE++KKAEAMGK G++ I+ KE SFIFTVE+T A+K S+++ N IE+L
Sbjct: 230 VIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVL 289
Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
K KLD V LS DT E D+ FG+LG HM
Sbjct: 290 KQKLDAVRLSDDTVEADDQFGELGAHM 316