BLASTX nr result

ID: Ephedra25_contig00013958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013958
         (1598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...   114   9e-23
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   114   1e-22
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   112   6e-22
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su...   112   6e-22
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A...   110   2e-21
gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea]       110   2e-21
gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe...   109   3e-21
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   109   3e-21
gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob...   109   4e-21
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su...   109   4e-21
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   109   4e-21
ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi...   109   4e-21
gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus...   108   5e-21
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-...   108   5e-21
gb|AFK41039.1| unknown [Medicago truncatula]                          108   5e-21
emb|CBI40277.3| unnamed protein product [Vitis vinifera]              108   5e-21
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   108   5e-21
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   108   5e-21
gb|ADE77570.1| unknown [Picea sitchensis]                             108   6e-21
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   107   1e-20

>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score =  114 bits (286), Expect = 9e-23
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           VYVCD +AY YDDE IKKAEA+GK GL+ I  KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 499 VYVCDAEAYTYDDEAIKKAEAVGKPGLVDITAKEDSFIFTVESTGAIKASQLVLNAIEIL 558

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V  S DT+E D+ FG+LG HM
Sbjct: 559 KQKLDAVRPSEDTEEADDQFGELGAHM 585


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
           gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3-like [Citrus
           sinensis] gi|557524889|gb|ESR36195.1| hypothetical
           protein CICLE_v10028849mg [Citrus clementina]
          Length = 319

 Score =  114 bits (285), Expect = 1e-22
 Identities = 58/89 (65%), Positives = 68/89 (76%)
 Frame = +1

Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630
           G VYV D +AY YDDE+IKKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N IE
Sbjct: 228 GQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIE 287

Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           +LK KLD V LS DT E D+ FG+LG HM
Sbjct: 288 VLKQKLDAVRLSEDTVEADDQFGELGAHM 316


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
           [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
           DNA-directed RNA polymerase II 36 kDa polypeptide B
           family protein [Populus trichocarpa]
          Length = 323

 Score =  112 bits (279), Expect = 6e-22
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK+GL+ I  KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 234 VVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEIL 293

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 294 KQKLDAVRLSDDTVEADDQFGELGVHM 320


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  112 bits (279), Expect = 6e-22
 Identities = 58/89 (65%), Positives = 67/89 (75%)
 Frame = +1

Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630
           G V V D +AY YDDE+IKKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N IE
Sbjct: 227 GKVVVVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIE 286

Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           ILK KLD V LS DT E D+ FG+LG HM
Sbjct: 287 ILKQKLDAVRLSEDTVEADDQFGELGAHM 315


>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
           gi|548856809|gb|ERN14637.1| hypothetical protein
           AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  110 bits (275), Expect = 2e-21
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  +E SFIFTVEST A+K S+++ N IE+L
Sbjct: 233 VVVVDPEAYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVL 292

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT+E DE FG+LG HM
Sbjct: 293 KQKLDAVRLSLDTEEGDEQFGELGAHM 319


>gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea]
          Length = 320

 Score =  110 bits (275), Expect = 2e-21
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           VYV D +AY YD+E++KKAE MGK  L+ IN KE SFIFTVE+T A+K S+++ N IEIL
Sbjct: 232 VYVADAEAYTYDEEVLKKAEGMGKARLVEINAKEDSFIFTVETTGAIKASQLLLNAIEIL 291

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS+DT E DE FG+LG HM
Sbjct: 292 KQKLDAVRLSADTVEADEQFGELGAHM 318


>gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score =  109 bits (273), Expect = 3e-21
 Identities = 57/87 (65%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEIL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cucumis sativus]
          Length = 320

 Score =  109 bits (273), Expect = 3e-21
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  +E SFIFTVEST A+K S++I N I+IL
Sbjct: 231 VMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDIL 290

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 291 KQKLDAVRLSDDTVEADDQFGELGAHM 317


>gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
          Length = 318

 Score =  109 bits (272), Expect = 4e-21
 Identities = 55/87 (63%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE++KKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N IE+L
Sbjct: 229 VVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cicer arietinum]
          Length = 319

 Score =  109 bits (272), Expect = 4e-21
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 230 VMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEIL 289

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 290 KQKLDAVRLSEDTVEADDQFGELGAHM 316


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score =  109 bits (272), Expect = 4e-21
 Identities = 55/87 (63%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YD+E+IKKAE+MGK GL+ I  KE SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEIL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>ref|XP_001765827.1| predicted protein [Physcomitrella patens]
           gi|162683004|gb|EDQ69418.1| predicted protein
           [Physcomitrella patens]
          Length = 324

 Score =  109 bits (272), Expect = 4e-21
 Identities = 56/87 (64%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YD+E++KKAEAMGK GL+ I  KE SFIFTVEST A+K S+M  N IEIL
Sbjct: 233 VVVVDPEAYTYDEEVLKKAEAMGKPGLVEIYSKEDSFIFTVESTGAIKASQMFLNAIEIL 292

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K+KLD V LS DT+E D+ FG+LG HM
Sbjct: 293 KSKLDAVRLSFDTEEADDQFGELGAHM 319


>gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
          Length = 318

 Score =  108 bits (271), Expect = 5e-21
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D++AY YDDE+IKKAEAMGK GL+ I  ++ SFIFTVEST A+K+S+++ N IEIL
Sbjct: 229 VMVVDSEAYSYDDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEIL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
           gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
           [Medicago truncatula] gi|355508950|gb|AES90092.1|
           DNA-directed RNA polymerase II subunit RPB3-A [Medicago
           truncatula]
          Length = 318

 Score =  108 bits (271), Expect = 5e-21
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>gb|AFK41039.1| unknown [Medicago truncatula]
          Length = 318

 Score =  108 bits (271), Expect = 5e-21
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE+IKKAEAMGK GL+ I  K+ SFIFTVEST A+K S+++ N IEIL
Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>emb|CBI40277.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  108 bits (271), Expect = 5e-21
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE++KKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N I++L
Sbjct: 117 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 176

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 177 KQKLDAVRLSEDTVEADDQFGELGAHM 203


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score =  108 bits (271), Expect = 5e-21
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE++KKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N I++L
Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  108 bits (271), Expect = 5e-21
 Identities = 54/87 (62%), Positives = 66/87 (75%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE++KKAEAMGK GL+ I  KE SFIFTVEST A+K S+++ N I++L
Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315


>gb|ADE77570.1| unknown [Picea sitchensis]
          Length = 330

 Score =  108 bits (270), Expect = 6e-21
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V+V D +AY YDDE+IKKAEAMGK GL+ IN K+ SFIFT+EST ALK S+M+ N I+IL
Sbjct: 238 VFVVDAEAYSYDDEVIKKAEAMGKPGLVSINAKDDSFIFTIESTGALKASQMLLNAIDIL 297

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KL+ V LS +T+E+D  F DL  HM
Sbjct: 298 KQKLETVRLSPETEEDDAQFIDLEQHM 324


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum tuberosum]
          Length = 319

 Score =  107 bits (268), Expect = 1e-20
 Identities = 53/87 (60%), Positives = 67/87 (77%)
 Frame = +1

Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636
           V V D +AY YDDE++KKAEAMGK G++ I+ KE SFIFTVE+T A+K S+++ N IE+L
Sbjct: 230 VIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVL 289

Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717
           K KLD V LS DT E D+ FG+LG HM
Sbjct: 290 KQKLDAVRLSDDTVEADDQFGELGAHM 316


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