BLASTX nr result
ID: Ephedra25_contig00013958
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00013958 (1598 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not... 114 9e-23 ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 114 1e-22 ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 112 6e-22 ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 112 6e-22 ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A... 110 2e-21 gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea] 110 2e-21 gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 109 3e-21 ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su... 109 3e-21 gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 109 4e-21 ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 109 4e-21 ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 109 4e-21 ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi... 109 4e-21 gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus... 108 5e-21 ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 108 5e-21 gb|AFK41039.1| unknown [Medicago truncatula] 108 5e-21 emb|CBI40277.3| unnamed protein product [Vitis vinifera] 108 5e-21 ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 108 5e-21 emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 108 5e-21 gb|ADE77570.1| unknown [Picea sitchensis] 108 6e-21 ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 107 1e-20 >gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis] Length = 588 Score = 114 bits (286), Expect = 9e-23 Identities = 57/87 (65%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 VYVCD +AY YDDE IKKAEA+GK GL+ I KE SFIFTVEST A+K S+++ N IEIL Sbjct: 499 VYVCDAEAYTYDDEAIKKAEAVGKPGLVDITAKEDSFIFTVESTGAIKASQLVLNAIEIL 558 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V S DT+E D+ FG+LG HM Sbjct: 559 KQKLDAVRPSEDTEEADDQFGELGAHM 585 >ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina] gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Citrus sinensis] gi|557524889|gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus clementina] Length = 319 Score = 114 bits (285), Expect = 1e-22 Identities = 58/89 (65%), Positives = 68/89 (76%) Frame = +1 Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630 G VYV D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE Sbjct: 228 GQVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIE 287 Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717 +LK KLD V LS DT E D+ FG+LG HM Sbjct: 288 VLKQKLDAVRLSEDTVEADDQFGELGAHM 316 >ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] gi|550331423|gb|EEE87820.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] Length = 323 Score = 112 bits (279), Expect = 6e-22 Identities = 57/87 (65%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK+GL+ I KE SFIFTVEST A+K S+++ N IEIL Sbjct: 234 VVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEIL 293 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 294 KQKLDAVRLSDDTVEADDQFGELGVHM 320 >ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Fragaria vesca subsp. vesca] Length = 318 Score = 112 bits (279), Expect = 6e-22 Identities = 58/89 (65%), Positives = 67/89 (75%) Frame = +1 Query: 451 G*VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIE 630 G V V D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE Sbjct: 227 GKVVVVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIE 286 Query: 631 ILKNKLDVVHLSSDTQEEDE*FGDLGHHM 717 ILK KLD V LS DT E D+ FG+LG HM Sbjct: 287 ILKQKLDAVRLSEDTVEADDQFGELGAHM 315 >ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda] gi|548856809|gb|ERN14637.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda] Length = 324 Score = 110 bits (275), Expect = 2e-21 Identities = 56/87 (64%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I +E SFIFTVEST A+K S+++ N IE+L Sbjct: 233 VVVVDPEAYTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVL 292 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT+E DE FG+LG HM Sbjct: 293 KQKLDAVRLSLDTEEGDEQFGELGAHM 319 >gb|EPS71627.1| hypothetical protein M569_03132 [Genlisea aurea] Length = 320 Score = 110 bits (275), Expect = 2e-21 Identities = 55/87 (63%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 VYV D +AY YD+E++KKAE MGK L+ IN KE SFIFTVE+T A+K S+++ N IEIL Sbjct: 232 VYVADAEAYTYDEEVLKKAEGMGKARLVEINAKEDSFIFTVETTGAIKASQLLLNAIEIL 291 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS+DT E DE FG+LG HM Sbjct: 292 KQKLDAVRLSADTVEADEQFGELGAHM 318 >gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica] Length = 318 Score = 109 bits (273), Expect = 3e-21 Identities = 57/87 (65%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IEIL Sbjct: 229 VMVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEIL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cucumis sativus] Length = 320 Score = 109 bits (273), Expect = 3e-21 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I +E SFIFTVEST A+K S++I N I+IL Sbjct: 231 VMVVDPEAYTYDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDIL 290 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 291 KQKLDAVRLSDDTVEADDQFGELGAHM 317 >gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao] Length = 318 Score = 109 bits (272), Expect = 4e-21 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N IE+L Sbjct: 229 VVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum] Length = 319 Score = 109 bits (272), Expect = 4e-21 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL Sbjct: 230 VMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEIL 289 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 290 KQKLDAVRLSEDTVEADDQFGELGAHM 316 >ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 318 Score = 109 bits (272), Expect = 4e-21 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YD+E+IKKAE+MGK GL+ I KE SFIFTVEST A+K S+++ N IEIL Sbjct: 229 VVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEIL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >ref|XP_001765827.1| predicted protein [Physcomitrella patens] gi|162683004|gb|EDQ69418.1| predicted protein [Physcomitrella patens] Length = 324 Score = 109 bits (272), Expect = 4e-21 Identities = 56/87 (64%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YD+E++KKAEAMGK GL+ I KE SFIFTVEST A+K S+M N IEIL Sbjct: 233 VVVVDPEAYTYDEEVLKKAEAMGKPGLVEIYSKEDSFIFTVESTGAIKASQMFLNAIEIL 292 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K+KLD V LS DT+E D+ FG+LG HM Sbjct: 293 KSKLDAVRLSFDTEEADDQFGELGAHM 319 >gb|ESW29765.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris] Length = 318 Score = 108 bits (271), Expect = 5e-21 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D++AY YDDE+IKKAEAMGK GL+ I ++ SFIFTVEST A+K+S+++ N IEIL Sbjct: 229 VMVVDSEAYSYDDEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEIL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula] gi|355508950|gb|AES90092.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] Length = 318 Score = 108 bits (271), Expect = 5e-21 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >gb|AFK41039.1| unknown [Medicago truncatula] Length = 318 Score = 108 bits (271), Expect = 5e-21 Identities = 56/87 (64%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE+IKKAEAMGK GL+ I K+ SFIFTVEST A+K S+++ N IEIL Sbjct: 229 VMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEIL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >emb|CBI40277.3| unnamed protein product [Vitis vinifera] Length = 206 Score = 108 bits (271), Expect = 5e-21 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L Sbjct: 117 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 176 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 177 KQKLDAVRLSEDTVEADDQFGELGAHM 203 >ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis vinifera] Length = 318 Score = 108 bits (271), Expect = 5e-21 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] Length = 318 Score = 108 bits (271), Expect = 5e-21 Identities = 54/87 (62%), Positives = 66/87 (75%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE++KKAEAMGK GL+ I KE SFIFTVEST A+K S+++ N I++L Sbjct: 229 VVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVL 288 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 289 KQKLDAVRLSEDTVEADDQFGELGAHM 315 >gb|ADE77570.1| unknown [Picea sitchensis] Length = 330 Score = 108 bits (270), Expect = 6e-21 Identities = 54/87 (62%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V+V D +AY YDDE+IKKAEAMGK GL+ IN K+ SFIFT+EST ALK S+M+ N I+IL Sbjct: 238 VFVVDAEAYSYDDEVIKKAEAMGKPGLVSINAKDDSFIFTIESTGALKASQMLLNAIDIL 297 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KL+ V LS +T+E+D F DL HM Sbjct: 298 KQKLETVRLSPETEEDDAQFIDLEQHM 324 >ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum] Length = 319 Score = 107 bits (268), Expect = 1e-20 Identities = 53/87 (60%), Positives = 67/87 (77%) Frame = +1 Query: 457 VYVCDTKAYFYDDEIIKKAEAMGKQGLLGIN*KEASFIFTVESTRALKTSEMIFNVIEIL 636 V V D +AY YDDE++KKAEAMGK G++ I+ KE SFIFTVE+T A+K S+++ N IE+L Sbjct: 230 VIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVL 289 Query: 637 KNKLDVVHLSSDTQEEDE*FGDLGHHM 717 K KLD V LS DT E D+ FG+LG HM Sbjct: 290 KQKLDAVRLSDDTVEADDQFGELGAHM 316