BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013937
         (1873 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827132.1| hypothetical protein AMTR_s00010p00249150 [A...   593   e-166
tpg|DAA35758.1| TPA: putative DNA-directed RNA polymerase subuni...   578   e-162
gb|ADB19860.1| mutant required to maintain repression 7-3/RNA po...   578   e-162
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ...   578   e-162
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...   575   e-161
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S...   574   e-161
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]    573   e-161
ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [S...   570   e-160
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami...   565   e-158
ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D sub...   560   e-156
ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D sub...   558   e-156
gb|EMT10124.1| DNA-directed RNA polymerase II subunit RPB2 [Aegi...   555   e-155
gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticu...   555   e-155
ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group] g...   555   e-155
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]         555   e-155
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   553   e-155
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   551   e-154
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   550   e-153
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   549   e-153
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              549   e-153

>ref|XP_006827132.1| hypothetical protein AMTR_s00010p00249150 [Amborella trichopoda]
            gi|548831561|gb|ERM94369.1| hypothetical protein
            AMTR_s00010p00249150 [Amborella trichopoda]
          Length = 1221

 Score =  593 bits (1528), Expect = e-166
 Identities = 305/620 (49%), Positives = 415/620 (66%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EK+FIAQE  C  R+WV   P W  +Y   N     K  +V V++ E  K      
Sbjct: 237  VKGAEKIFIAQENMCLRRLWVSKTPSWSVLYRHGNS----KQKRVDVRIVESQKGDT--- 289

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   S    I + F + +VP+ ++F+ALG  SD E+VQMI     D  +   +LS+I
Sbjct: 290  ------LSGGKVINIYFQYASVPIWIMFFALGALSDKEIVQMIDLDPSDTNLAYILLSTI 343

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
            Y A+ + + FR  ++ ++Y+D ++++AK+P   SVEE +D+ LFP ++ +++KA+ LGYM
Sbjct: 344  YDADEKCEGFRQGKNSIEYLDREIQSAKFPPKESVEECIDSLLFPSLRERKQKALYLGYM 403

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL SY GRR+V+NKDD+RNKRL LA EL+ ++M   ++   ++++KAIQ+DLS  + 
Sbjct: 404  VKCLLLSYFGRRKVDNKDDFRNKRLGLAAELIEKEMLAHIKNAGRRMVKAIQRDLSADRI 463

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            LK +ECY D S++TNGLARAFSTG W HP   + + +GVVA++K+ NPLQ ++ MR+ RL
Sbjct: 464  LKPIECYFDGSIVTNGLARAFSTGNWCHPFKVSERISGVVATLKRTNPLQTMAHMRQTRL 523

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             VQY   +G+ARYPNPSYWG+VCF+STPDGENCGLVKNLA T +VS N  E PL++ L +
Sbjct: 524  QVQYTGNIGNARYPNPSYWGKVCFLSTPDGENCGLVKNLAATGLVSTNLRE-PLLDKLTR 582

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KLD VS        KVF+NGE +G+C +    V ++RNMRR + I   VE+K+D  
Sbjct: 583  CGMDKLDRVSPPSLSGKDKVFLNGEWVGLCEDSSRFVSELRNMRRNKLIHHQVEVKRDQP 642

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
            Q E+RIF DAGR+LRPLL+VEN +LC+   Q++ F     PF YLL  R          E
Sbjct: 643  QHEVRIFSDAGRILRPLLIVENNKLCVSLEQINEFIKKGCPFQYLLDKRIVEFIGVEEEE 702

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D  IA GV  L     ++     +THCELD SFLL L+  +IPFAN N+A R L+QSEKH
Sbjct: 703  DCLIAWGVKHLLSDEKNQP-AQKYTHCELDLSFLLGLSCGMIPFANHNMARRVLFQSEKH 761

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCLSKPQLYNGQNAIVAVNVHYGY 72
            S+QAIG +T++   R DT  H L YPQKPLF+T+  +C+  P+ +NGQNAIVAVNVH GY
Sbjct: 762  SQQAIGFFTSNPNNRVDTLSHRLYYPQKPLFKTMLSECIGIPEFHNGQNAIVAVNVHEGY 821

Query: 71   NQEDSLVANRASIDRGMFRS 12
            NQEDS+V NRAS+DRGMFR+
Sbjct: 822  NQEDSIVMNRASLDRGMFRT 841


>tpg|DAA35758.1| TPA: putative DNA-directed RNA polymerase subunit family protein [Zea
            mays]
          Length = 1063

 Score =  578 bits (1490), Expect = e-162
 Identities = 299/636 (47%), Positives = 417/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 261  VKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRR-----RIYIKLVESTRSED--- 312

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   SE   I +SF + T+PV LLF+ALGISSD E+  MI     D  +   I ++I
Sbjct: 313  ------FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATI 366

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   +DFR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 367  KESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 426

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 427  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRE 486

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 487  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 546

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 547  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQ-PLIESFIS 605

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C N  S V ++R MRR   IDP VEIK+D  
Sbjct: 606  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKH 665

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
              E+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 666  HNEVRVFTDAGRILRPLLVVEN------LNKIRKPKGRSFSFHELMQQEIIEFIGVEEEE 719

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 720  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 776

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 777  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFN 836

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 837  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 872


>gb|ADB19860.1| mutant required to maintain repression 7-3/RNA polymerase D second
            largest subunit 2-3 [Zea mays]
          Length = 1094

 Score =  578 bits (1490), Expect = e-162
 Identities = 299/636 (47%), Positives = 417/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 261  VKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRR-----RIYIKLVESTRSED--- 312

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   SE   I +SF + T+PV LLF+ALGISSD E+  MI     D  +   I ++I
Sbjct: 313  ------FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATI 366

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   +DFR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 367  KESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 426

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 427  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRE 486

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 487  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 546

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 547  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQ-PLIESFIS 605

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C N  S V ++R MRR   IDP VEIK+D  
Sbjct: 606  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKH 665

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
              E+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 666  HNEVRVFTDAGRILRPLLVVEN------LNKIRKPKGRSFSFHELMQQEIIEFIGVEEEE 719

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 720  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 776

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 777  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFN 836

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 837  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 872


>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
            gi|283443696|gb|ADB19857.1| required to maintain
            repression 7/RNA polymerase D second largest subunit [Zea
            mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
            gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
            RNA polymerase subunit family protein [Zea mays]
          Length = 1229

 Score =  578 bits (1490), Expect = e-162
 Identities = 299/636 (47%), Positives = 417/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 261  VKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRR-----RIYIKLVESTRSED--- 312

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   SE   I +SF + T+PV LLF+ALGISSD E+  MI     D  +   I ++I
Sbjct: 313  ------FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATI 366

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   +DFR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 367  KESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 426

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 427  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRE 486

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 487  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 546

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 547  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQ-PLIESFIS 605

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C N  S V ++R MRR   IDP VEIK+D  
Sbjct: 606  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKH 665

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
              E+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 666  HNEVRVFTDAGRILRPLLVVEN------LNKIRKPKGRSFSFHELMQQEIIEFIGVEEEE 719

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 720  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 776

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 777  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFN 836

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 837  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 872


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score =  575 bits (1482), Expect = e-161
 Identities = 298/636 (46%), Positives = 416/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 261  VKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRR-----RIYIKLVESTRSED--- 312

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   SE   I +SF + T+PV LLF+ALGISSD E+  MI     D  +   I ++I
Sbjct: 313  ------FSESKIITISFLYATMPVWLLFFALGISSDKEVFDMIDMQDCDASVINTISATI 366

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   +DFR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 367  KESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 426

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 427  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRE 486

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 487  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 546

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYW ++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 547  RVAYAGKAGDARYPNPSYWEKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQ-PLIESFIS 605

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C N  S V ++R MRR   IDP VEIK+D  
Sbjct: 606  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKH 665

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
              E+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 666  HNEVRVFTDAGRILRPLLVVEN------LNKIRKPKGRSFSFHELMQQEIIEFIGVEEEE 719

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 720  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 776

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 777  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFN 836

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 837  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 872


>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
            gi|241938382|gb|EES11527.1| hypothetical protein
            SORBIDRAFT_06g030300 [Sorghum bicolor]
          Length = 1239

 Score =  574 bits (1479), Expect = e-161
 Identities = 298/636 (46%), Positives = 416/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+WV ++P WM  +     R      ++ +KL E  +++    
Sbjct: 271  VKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRR-----RIYIKLVESTRSED--- 322

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   S    I +SF + T+PV LLF+ALGISSD E   +I     D  +   I ++I
Sbjct: 323  ------FSGSKVISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATI 376

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   K FR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA  LGYM
Sbjct: 377  KESDELCKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKAFFLGYM 436

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR L ++++KAIQ+DL+  ++
Sbjct: 437  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRDLNNDRE 496

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 497  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 556

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 557  RVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQ-PLIESFIS 615

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C +  S V ++R MRR   IDP VEIK+D  
Sbjct: 616  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQVEIKRDKH 675

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
             KE+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 676  HKEVRVFSDAGRILRPLLVVEN------LNKIRKPKGRSFSFQELMQQEIIEFIGVEEEE 729

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFL+ L+  +IPFAN N A R LYQSEKH
Sbjct: 730  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLMGLSCGIIPFANHNFARRVLYQSEKH 786

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 787  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYTRPEYFN 846

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 847  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 882


>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
          Length = 1170

 Score =  573 bits (1478), Expect = e-161
 Identities = 297/636 (46%), Positives = 415/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE+RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 202  VKGMEKVFIAQEQRCLRRLWISDRPCWTISFMSEIKRR-----RIYIKLVESTRSED--- 253

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   SE   I +SF + T+PV L  +ALGISSD E+  MI     D  +   I ++I
Sbjct: 254  ------FSESKIITISFLYATMPVWLXXFALGISSDKEVFDMIXMQDCDASVINTISATI 307

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   +DFR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 308  KESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 367

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 368  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLAEKRMVKAIQRDLNSDRE 427

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 428  LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 487

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 488  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVMQ-PLIESFIS 546

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C N  S V ++R MRR   IDP VEIK+D  
Sbjct: 547  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSASFVFRLRCMRRSSLIDPQVEIKRDKH 606

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
              E+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 607  HNEVRVFTDAGRILRPLLVVEN------LNKIRKPKGRSFSFHELMQQEIIEFIGVEEEE 660

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 661  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 717

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 718  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYASFGRKNDFARPEYFN 777

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 778  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 813


>ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
            gi|241922081|gb|EER95225.1| hypothetical protein
            SORBIDRAFT_01g042100 [Sorghum bicolor]
          Length = 1228

 Score =  570 bits (1469), Expect = e-160
 Identities = 298/636 (46%), Positives = 414/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE RC  R+W+ ++P WM  +     R      ++ +KL E  +++    
Sbjct: 260  VKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRR-----RIYIKLVESTRSED--- 311

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   S    I +SF + T+PV LLF+ALGISSD E   +I     D  +   I ++I
Sbjct: 312  ------FSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATI 365

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   + FR  +   +Y+D+ +K++++P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 366  KESDELCEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKALFLGYM 425

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   K+++KAIQ+DL+  ++
Sbjct: 426  VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRDLNSDRE 485

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL+RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 486  LQDLERYIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 545

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLIE    
Sbjct: 546  RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQ-PLIESFIS 604

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  +G C +  S V ++R MRR   IDP VEIK+D  
Sbjct: 605  CGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEIKRDKH 664

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
             KE+R+F DAGR+LRPLLVVEN +   K       K     F  L++            E
Sbjct: 665  HKEVRVFSDAGRILRPLLVVENLKKIRKP------KGRSFSFQELMQQEIIEFIGVEEEE 718

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSFLL L+  +IPFAN N A R LYQSEKH
Sbjct: 719  DIQCAWGIRHLFE---SEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKH 775

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCLS--------------KPQLYN 114
            S+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   CL               +P+ +N
Sbjct: 776  SQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFN 835

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 836  GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 871


>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
            mays]
          Length = 2163

 Score =  565 bits (1457), Expect = e-158
 Identities = 296/636 (46%), Positives = 416/636 (65%), Gaps = 14/636 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EKVFIAQE RC  R+W+ ++P W   +     R      ++ +KL E  +++    
Sbjct: 1195 VKGMEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRR-----RIYIKLVESTRSED--- 1246

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                   S    I +SF + T+PV LLF+ALGISSD E   +I     D  +   I ++I
Sbjct: 1247 ------FSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATI 1300

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++     FR  +   +Y+D+ +K++K+P   S ++ +   LFP I G R KA+ LGYM
Sbjct: 1301 KESDELCGGFRKSDKARQYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYM 1360

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRL+L GELLGR+++  LR   ++++KAIQ+DL+  ++
Sbjct: 1361 VKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRE 1420

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+ +E YID+S++TNGL RAFSTG+W HP   A +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 1421 LQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQ 1480

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVTS+VS +   +PLIE    
Sbjct: 1481 RVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTSIVS-SKVVQPLIESFIS 1539

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL+D+       M K+F+NG  LG C++  S V ++R MRR   IDP VEIK+D  
Sbjct: 1540 CGMNKLNDIPTEHIQRMDKIFLNGNWLGSCSDSASFVFRLRCMRRSSLIDPQVEIKRDKH 1599

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
             KE+R+F DAGR+LRPLLVVEN       +++   K     F  L++            E
Sbjct: 1600 YKEVRLFSDAGRILRPLLVVEN------LNKIRKPKGRSFSFQELMQQEIIEFIGVEEEE 1653

Query: 431  DAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSEKH 252
            D Q A G+  L +   S+G    +THCELDPSF+L L+  +IPFAN N A R LYQSEKH
Sbjct: 1654 DIQCAWGIRHLFE---SEGAISSYTHCELDPSFILGLSCGIIPFANHNFARRVLYQSEKH 1710

Query: 251  SRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL--------------SKPQLYN 114
            S+QAIG+ T++ ++R DT  H+L YPQ+PLF+T+   CL              ++P+ +N
Sbjct: 1711 SQQAIGYSTSNPRIRVDTLSHQLYYPQRPLFKTVIADCLGRSDCTTFGRKDDFTRPEYFN 1770

Query: 113  GQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            GQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 1771 GQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 1806


>ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
            [Brachypodium distachyon]
          Length = 1213

 Score =  560 bits (1442), Expect = e-156
 Identities = 298/640 (46%), Positives = 411/640 (64%), Gaps = 18/640 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKKWDKVIVKLNEDIKAKK 1701
            IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K  D      N D+   K
Sbjct: 243  IKGMEKIFIAQEQRCLTRIWVADRPCWNVSYLSEMKRRRVYIKLIDSTT---NNDLNGAK 299

Query: 1700 KAKDNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFIL 1521
                           I +SF +  +P+ LLF+ALG+SSD E+  MI     D  +   I 
Sbjct: 300  I--------------ISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIS 345

Query: 1520 SSIYKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLL 1341
            ++I +++   + FR  +   KY+DD +K++K+P      + +  +LFP I G R KA  L
Sbjct: 346  ATIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKAFFL 405

Query: 1340 GYMVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSG 1161
            GYMV CLL ++ G+R+ +NKDD+RNKRLEL G+LLGR+++  LR   + ++KA+Q+DL+ 
Sbjct: 406  GYMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNS 465

Query: 1160 QKDLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRR 981
             +DL+    Y+D+S+ITNG+ RAF+TG+W HP     +C+G+VA++++ NPLQ++S++R+
Sbjct: 466  DRDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRK 525

Query: 980  LRLWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEF 801
             R  V YA K+GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLI+ 
Sbjct: 526  SRQQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQ-PLIDR 584

Query: 800  LEKNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKK 621
                G+ KLD++S  +   M K+F+NG+ +G C +P S V ++R MRR   IDP VEIK+
Sbjct: 585  FVSCGMNKLDEISAKEIPKMDKIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKR 644

Query: 620  DSQQ--KEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXX 447
            D  Q   E+R+F DAGR+LRPLLVVEN       +++   K     F  LL+        
Sbjct: 645  DKHQFPGEVRVFSDAGRILRPLLVVEN------LNKIRKSKDRHYTFQALLQQEIIEYIG 698

Query: 446  XXXXEDAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLY 267
                ED Q A G+  L  +S  K     +THCELD SFLL L+  LIPFAN N A R LY
Sbjct: 699  VEEEEDIQCAWGIRHLFPSSGEK--VSGYTHCELDLSFLLGLSCGLIPFANHNFARRVLY 756

Query: 266  QSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL-------------SKP 126
            QSEKHS+QAIG+ TT+   R DT  H+L YPQ+PLF+T++  C+             ++P
Sbjct: 757  QSEKHSQQAIGYSTTNPLTRVDTHSHQLYYPQRPLFKTVTADCIGRSDYTIGRKDDFARP 816

Query: 125  QLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            + +NGQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 817  EYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 856


>ref|XP_003577435.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
            [Brachypodium distachyon]
          Length = 1213

 Score =  558 bits (1439), Expect = e-156
 Identities = 298/642 (46%), Positives = 412/642 (64%), Gaps = 20/642 (3%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKKWDKVIVKLNEDIKAKK 1701
            IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K  D      N D+   K
Sbjct: 243  IKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLIDSTT---NNDLNGAK 299

Query: 1700 KAKDNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFIL 1521
                           I +SF +  +P+ LLF+ALG+SSD E+  MI     D  +   I 
Sbjct: 300  I--------------ISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIY 345

Query: 1520 SSIYKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLL 1341
            ++I +++   + FR  +   KY+DD +K++K+P      + +  +LFP I G R K+  L
Sbjct: 346  ATIRESDELCEGFRQSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKSFFL 405

Query: 1340 GYMVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSG 1161
            GYMV CLL ++ G+R+ +NKDD+RNKRLEL G+LLGR+++  LR   + ++KA+Q+DL+ 
Sbjct: 406  GYMVKCLLMAFTGKRKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNS 465

Query: 1160 QKDLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRR 981
             +DL+    Y+D+S+ITNG+ RAF+TG+W HP     +C+G+VA++++ NPLQ++S++R+
Sbjct: 466  DRDLQFPLRYLDASIITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRK 525

Query: 980  LRLWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEF 801
             R  V YA K+GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS    + PLI+ 
Sbjct: 526  SRQQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQ-PLIDR 584

Query: 800  LEKNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKK 621
                G+ KLD++S  +   M K+F+NG+ +G C +P S V ++R MRR   IDP VEIK+
Sbjct: 585  FVSCGMNKLDEISAKEIPKMDKIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKR 644

Query: 620  DSQQ--KEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLY--LLKNRXXXX 453
            D  Q   E+R+F DAGR+LRPLLVVEN             KS + P+ +  LL+      
Sbjct: 645  DKHQFPGEVRVFSDAGRILRPLLVVENLN--------KIRKSKDRPYTFQALLQQEIIEY 696

Query: 452  XXXXXXEDAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRT 273
                  ED Q A G+  L  +S  K     +THCELD SFLL L+  LIPFAN N A R 
Sbjct: 697  IGVEEEEDIQCAWGIRHLFPSSGEK--VSGYTHCELDLSFLLGLSCGLIPFANHNFARRV 754

Query: 272  LYQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL-------------S 132
            LYQSEKHS+QAIG+ TT+   R DT  H+L YPQ+PLF+T++  C+             +
Sbjct: 755  LYQSEKHSQQAIGYSTTNPLTRVDTHSHQLYYPQRPLFKTVTADCIGRSDYTIGRKDDFA 814

Query: 131  KPQLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            +P+ +NGQNAIVAVNVH G+NQEDSLV NRAS++RGMFR+ H
Sbjct: 815  RPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEH 856


>gb|EMT10124.1| DNA-directed RNA polymerase II subunit RPB2 [Aegilops tauschii]
          Length = 1324

 Score =  555 bits (1431), Expect = e-155
 Identities = 294/635 (46%), Positives = 415/635 (65%), Gaps = 15/635 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            I+G EK+FIAQE+RC TRIW+ ++PVW   Y     R      ++ VKL +        K
Sbjct: 303  IRGMEKIFIAQEQRCLTRIWIADRPVWTVSYLSEIKRR-----RIYVKLIDS------TK 351

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
            +N+    S    I +SF +  +P+ L+F+ALG+SSD E   MI     D  +   I ++I
Sbjct: 352  NND---FSGSKIISISFLYANLPIWLMFFALGVSSDKEAFDMIDMGDCDASVINAISATI 408

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   + FR  +   + +DDK+K++K+P   S ++ +  +LFP IKG R KA+ LGYM
Sbjct: 409  SESDELCEGFRKSDKARQCVDDKVKSSKFPPGESFDDYIAKYLFPGIKGNRNKALFLGYM 468

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRLEL G+LLGR+++  LR   + ++KA+Q+DL+  +D
Sbjct: 469  VKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRD 528

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+    Y+D+S+ITNG+ RAF+TG+W HP     +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 529  LEFPMRYLDASIITNGINRAFATGSWCHPYRRNERCSGIVATLRRTNPLQMMSDLRKSRQ 588

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS   ++ PLI+    
Sbjct: 589  QVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVAQ-PLIDRFVS 647

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KLD++       M K+F+NG+ +G C +P S V ++R MRR   IDP VEIK+D  
Sbjct: 648  CGMNKLDEIPAKKIPQMDKIFLNGDWVGSCADPASFVMRLRCMRRGGLIDPQVEIKRDKH 707

Query: 611  QK--EIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXX 438
            Q   E+R+F DAGRLLRPLLVVEN     K+      K     F  L++           
Sbjct: 708  QSPGEVRVFSDAGRLLRPLLVVENLNKITKR------KGSPYSFQALMQQEIIEFIGVEE 761

Query: 437  XEDAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSE 258
             ED Q A G+  L ++S  +     +THCELD SFLL L+  LIPFAN N A R LYQ+E
Sbjct: 762  EEDIQCAWGIRHLFQSSGEE--VSGYTHCELDLSFLLGLSCGLIPFANHNFARRVLYQAE 819

Query: 257  KHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL-------------SKPQLY 117
            KHS+QAIG+ TT+   R DT  H+L YPQ+PLF+T+S  C+             ++P+ +
Sbjct: 820  KHSQQAIGYSTTNPLTRVDTLSHQLYYPQRPLFKTVSADCIGRSDYTFGRKDDFARPEYF 879

Query: 116  NGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRS 12
            NGQNAIVAVN+H G+NQEDSLV NRAS++RGMFR+
Sbjct: 880  NGQNAIVAVNIHQGFNQEDSLVMNRASLERGMFRT 914


>gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticum urartu]
          Length = 1269

 Score =  555 bits (1431), Expect = e-155
 Identities = 294/635 (46%), Positives = 415/635 (65%), Gaps = 15/635 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            I+G EK+FIAQE+RC TRIW+ ++PVW   Y     R      ++ VKL +        K
Sbjct: 265  IRGMEKIFIAQEQRCLTRIWIADRPVWTVSYLSEIKRR-----RIYVKLIDS------TK 313

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
            +N+    S    I +SF +  +P+ L+F+ALG+SSD E   MI     D  +   I ++I
Sbjct: 314  NND---FSGSKIISISFLYANMPIWLMFFALGVSSDKEAFDMIDMGDCDASVINAISATI 370

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
             +++   + FR  +   + +DD +K++K+P   S ++ +  +LFP IKG R KA+ LGYM
Sbjct: 371  SESDELCEGFRKSDKARQCVDDLVKSSKFPPGESFDDYIAKYLFPGIKGNRNKALFLGYM 430

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL ++ G+R+ +NKDD+RNKRLEL G+LLGR+++  LR   + ++KA+Q+DL+  +D
Sbjct: 431  VKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRD 490

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            L+    Y+D+S+ITNG+ RAF+TG+W HP     +C+G+VA++++ NPLQ++S++R+ R 
Sbjct: 491  LEFPTRYLDASIITNGINRAFATGSWCHPYKRNERCSGIVATLRRTNPLQMMSDLRKSRQ 550

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT++VS   ++ PLI+    
Sbjct: 551  QVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVAQ-PLIDRFVS 609

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KLD++       M K+F+NG+ +G C +P S V ++R MRR   IDP VEIK+D  
Sbjct: 610  CGMNKLDEIPAKQIPKMDKIFLNGDWVGSCADPASFVMRLRCMRRGGLIDPQVEIKRDKH 669

Query: 611  QK--EIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXX 438
            Q   E+R+F DAGRLLRPLLVVEN     K+      K     F  L++           
Sbjct: 670  QSPGEVRVFSDAGRLLRPLLVVENLNKITKR------KGSPYSFQALMQQEIIEFIGVEE 723

Query: 437  XEDAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRTLYQSE 258
             ED Q A G+  L ++S  +     +THCELD SFLL L+ SLIPFAN N A R LYQ+E
Sbjct: 724  EEDIQCAWGIRHLFQSSGDE--VSGYTHCELDLSFLLGLSCSLIPFANHNFARRVLYQAE 781

Query: 257  KHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL-------------SKPQLY 117
            KHS+QAIG+ TT+   R DT  H+L YPQ+PLF+T+S  C+             ++P+ +
Sbjct: 782  KHSQQAIGYSTTNPLTRVDTLSHQLYYPQRPLFKTVSADCIGRSDYTFGRKDDFARPEYF 841

Query: 116  NGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRS 12
            NGQNAIVAVN+H G+NQEDSLV NRAS++RGMFR+
Sbjct: 842  NGQNAIVAVNIHQGFNQEDSLVMNRASLERGMFRT 876


>ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group]
            gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
            sativa Japonica Group]
          Length = 1270

 Score =  555 bits (1429), Expect = e-155
 Identities = 291/656 (44%), Positives = 422/656 (64%), Gaps = 33/656 (5%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVY-TPSNDRYLKKWDKVIVKLNEDIKAKKKA 1695
            IKG EKVFIAQE++C TRIWV+++P WM  + +P   R      ++ +KL +       +
Sbjct: 278  IKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRR------RIYIKLID-------S 324

Query: 1694 KDNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSS 1515
             +NE   AS    I +SF +  +P+ L+F+ALGISSD ++  +I     D  +   I ++
Sbjct: 325  ANNED--ASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITAT 382

Query: 1514 IYKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGY 1335
            I +++   + FR  +   +Y+D+ +KN+K+P     ++ +  +LFP I G R KA+ LGY
Sbjct: 383  IKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGY 442

Query: 1334 MVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQK 1155
            MV CLL ++ G+R+ +NKDD+RNKRL+LAGELLGR+++  +R   + ++KA+Q+DL+ ++
Sbjct: 443  MVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSER 502

Query: 1154 DLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLR 975
            +L+  + Y+D+S+ITNGL RAFSTG+W HP     +C G+VA++++ NPLQ++S++R+ R
Sbjct: 503  ELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTR 562

Query: 974  LWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLE 795
              V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT+ VS   +  PLI+   
Sbjct: 563  QRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVA-PPLIDRFI 621

Query: 794  KNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDS 615
              G+ KL ++   +   M K+F+NG+ +G C++P S V ++R MRR   IDP VEIK+D 
Sbjct: 622  SCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDK 681

Query: 614  QQKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXX 435
             Q+E+R+F DAGR+LRPLLVVEN       +++   K     F +L++            
Sbjct: 682  HQREVRVFSDAGRILRPLLVVEN------LNKIRRPKGSSYSFQWLMQQEIIEFIGVEEE 735

Query: 434  EDAQIACGV-------------------DVLQKASLSKGFYPPFTHCELDPSFLLSLNAS 312
            ED + A G+                   DV        G    +THCELD SFLL L+  
Sbjct: 736  EDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCG 795

Query: 311  LIPFANRNLATRTLYQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL- 135
            +IPFAN N A R LYQSEKHS+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   C+ 
Sbjct: 796  IIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIG 855

Query: 134  ------------SKPQLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMHY 3
                        ++P+ +NGQNAIVAVNVH G+NQEDS+V NRAS++RGMFR+ H+
Sbjct: 856  RSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHF 911


>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score =  555 bits (1429), Expect = e-155
 Identities = 291/656 (44%), Positives = 422/656 (64%), Gaps = 33/656 (5%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVY-TPSNDRYLKKWDKVIVKLNEDIKAKKKA 1695
            IKG EKVFIAQE++C TRIWV+++P WM  + +P   R      ++ +KL +       +
Sbjct: 324  IKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRR------RIYIKLID-------S 370

Query: 1694 KDNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSS 1515
             +NE   AS    I +SF +  +P+ L+F+ALGISSD ++  +I     D  +   I ++
Sbjct: 371  ANNED--ASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITAT 428

Query: 1514 IYKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGY 1335
            I +++   + FR  +   +Y+D+ +KN+K+P     ++ +  +LFP I G R KA+ LGY
Sbjct: 429  IKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGY 488

Query: 1334 MVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQK 1155
            MV CLL ++ G+R+ +NKDD+RNKRL+LAGELLGR+++  +R   + ++KA+Q+DL+ ++
Sbjct: 489  MVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSER 548

Query: 1154 DLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLR 975
            +L+  + Y+D+S+ITNGL RAFSTG+W HP     +C G+VA++++ NPLQ++S++R+ R
Sbjct: 549  ELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTR 608

Query: 974  LWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLE 795
              V YA K GDARYPNPSYWG++CF+STPDGENCGLVKNLAVT+ VS   +  PLI+   
Sbjct: 609  QRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVA-PPLIDRFI 667

Query: 794  KNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDS 615
              G+ KL ++   +   M K+F+NG+ +G C++P S V ++R MRR   IDP VEIK+D 
Sbjct: 668  SCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDK 727

Query: 614  QQKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXX 435
             Q+E+R+F DAGR+LRPLLVVEN       +++   K     F +L++            
Sbjct: 728  HQREVRVFSDAGRILRPLLVVEN------LNKIRRPKGSSYSFQWLMQQEIIEFIGVEEE 781

Query: 434  EDAQIACGV-------------------DVLQKASLSKGFYPPFTHCELDPSFLLSLNAS 312
            ED + A G+                   DV        G    +THCELD SFLL L+  
Sbjct: 782  EDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCG 841

Query: 311  LIPFANRNLATRTLYQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCL- 135
            +IPFAN N A R LYQSEKHS+QAIG+ TT+  +R DT  H+L YPQ+PLF+T+   C+ 
Sbjct: 842  IIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIG 901

Query: 134  ------------SKPQLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMHY 3
                        ++P+ +NGQNAIVAVNVH G+NQEDS+V NRAS++RGMFR+ H+
Sbjct: 902  RSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHF 957


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  553 bits (1425), Expect = e-155
 Identities = 300/640 (46%), Positives = 410/640 (64%), Gaps = 18/640 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLN-----EDIKA 1707
            IKG EKVF+AQE+ C  R+WV N   W   Y   N R     +++IV+L      EDIK 
Sbjct: 223  IKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKR-----NRLIVRLVDMSKFEDIKG 277

Query: 1706 KKKAKDNEPSYASEKDEIVVSFFFIT--VPVVLLFYALGISSDLEMVQMIGCSHEDREIC 1533
             +K               V+S +F++  +P+ +LF+ALG+SSD E+V +I  + ED  I 
Sbjct: 278  GEK---------------VLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSIL 322

Query: 1532 EFILSSIYKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREK 1353
              + +SI+ A+++  +FR   + LKY+D  +K   +P   S EE ++ +LFP + G ++K
Sbjct: 323  NILFASIHDADNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQK 382

Query: 1352 AMLLGYMVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQK 1173
            A  LGYMV CLL +Y GRR+ +N+DD+RNKRLELAGELL R+++V +   RK++ KA+Q+
Sbjct: 383  ARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQR 442

Query: 1172 DLSGQKDLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLS 993
            DL G + ++ +E Y+D+S++TNGL+RAFSTG W HP     + +G+VA++ + NPLQ L 
Sbjct: 443  DLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLV 502

Query: 992  EMRRLRLWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKP 813
            ++RR R  VQY  K+GDARYP+PS+WG++CF+STPDGENCGLVKNL VT +VS  S  +P
Sbjct: 503  DLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVS-TSILEP 561

Query: 812  LIEFLEKNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLV 633
            + E L  +G+ KL D +        KVFV+G+ +G+C +  S V ++R  RR++ +   V
Sbjct: 562  IFEQLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQV 621

Query: 632  EIKKDSQQKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXX 453
            EIK+D  Q E+RIF DAGR+LRPLLVVEN        ++ + +     F  LL +     
Sbjct: 622  EIKRDELQSEVRIFMDAGRILRPLLVVEN------MGKIKSLEGKNYTFQALLDHGIIEL 675

Query: 452  XXXXXXEDAQIACGVDVLQKASLSKGFYPPFTHCELDPSFLLSLNASLIPFANRNLATRT 273
                  ED   A G+  L K    K     FTHCELD SFLL L+  +IPFAN + A R 
Sbjct: 676  VGTEEEEDCCTAWGIKYLLKDIEDKKPI-KFTHCELDMSFLLGLSCGIIPFANHDHARRV 734

Query: 272  LYQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCLSK-----------P 126
            LYQS+KHS QAIG  TT+  +R DT  H+L YPQ+PLFRT+   CL K           P
Sbjct: 735  LYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNHILPRP 794

Query: 125  QLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            +LYNGQNAIVAVNVH GYNQEDSLV NRAS++RGMFRS H
Sbjct: 795  ELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 834


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  551 bits (1419), Expect = e-154
 Identities = 293/637 (45%), Positives = 410/637 (64%), Gaps = 15/637 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EK FIAQE+ C  R+WV N P WM  Y P   R      +V +KL E +K +    
Sbjct: 248  VKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKR-----KRVYIKLTETLKLE---- 298

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                 +    ++ +  +    +P+ +LF+ALG+SSD E+V +I    ED  I   +++SI
Sbjct: 299  -----HIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASI 353

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
            ++A+   +DFR  +  L Y+D  +KN K+P   SVEE ++A+LFP + G ++KA  LGYM
Sbjct: 354  HEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYM 413

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL S++GRR+V+N+DD+RNKRLELAGELL R+++  ++   ++++KA+Q+DL G + 
Sbjct: 414  VKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQ 473

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            ++ +E Y+D+S+ITNGL+RAFSTG W HP     + +GVVA++++ NPLQ+ ++MR+ R 
Sbjct: 474  VQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQ 533

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V Y  K+GDARYP+PS+WG++CF+STPDGENCGLVKNLA   +VS     KP +E L +
Sbjct: 534  QVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVS-TIILKPFLETLFR 592

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL D   +  H   KV ++GE +G+C +    V K+R  RR+  +   VE+K+D  
Sbjct: 593  CGMQKLVDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEL 652

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
            Q E+RIF D+GR+LRPLLVV N +      ++   K  +  F  LL N           E
Sbjct: 653  QGEVRIFSDSGRILRPLLVVSNLK------KIKALKGGDYGFQSLLDNGIIEFIGPEEEE 706

Query: 431  DAQIACGVDVLQKASLSKGFYPP--FTHCELDPSFLLSLNASLIPFANRNLATRTLYQSE 258
            D + A GV+ + KA       PP  +THCELD SFLL L+  +IPFAN + A R LYQSE
Sbjct: 707  DCRTAWGVEYILKADKEN---PPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSE 763

Query: 257  KHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTL-----------SYQ--CLSKPQLY 117
            KHS+QAIG  T +   R DT+ H+L YPQ+PLFRT+            YQ   L +P+ +
Sbjct: 764  KHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYF 823

Query: 116  NGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            NGQ AIVAVNVH GYNQEDSLV NRAS++RGMFRS H
Sbjct: 824  NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 860


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  550 bits (1416), Expect = e-153
 Identities = 293/637 (45%), Positives = 409/637 (64%), Gaps = 15/637 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            +KG EK FIAQE+ C  R+WV N P WM  Y P   R      +V +KL E +K +    
Sbjct: 248  VKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKR-----KRVYIKLTETLKLE---- 298

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
                 +    ++ +  +    +P+ +LF+ALG+SSD E+V +I    ED  I   +++SI
Sbjct: 299  -----HIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASI 353

Query: 1511 YKAESELKDFRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAMLLGYM 1332
            ++A+   +DFR  +  L Y+D  +KN K+P   SVEE ++A+LFP + G ++KA  LGYM
Sbjct: 354  HEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYM 413

Query: 1331 VNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLSGQKD 1152
            V CLL S++GRR+V+N+DD+RNKRLELAGELL R+++  ++   ++++KA+Q+DL G + 
Sbjct: 414  VKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQ 473

Query: 1151 LKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMRRLRL 972
            ++ +E Y+D+S+ITNGL+RAFSTG W HP     + +GVVA++++ NPLQ+ ++MR+ R 
Sbjct: 474  VQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQ 533

Query: 971  WVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIEFLEK 792
             V Y  K+GDARYP+PS+WG++CF+STPDGENCGLVKNLA   +VS     KP +E L +
Sbjct: 534  QVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVS-TIILKPFLETLFR 592

Query: 791  NGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIKKDSQ 612
             G+ KL D   +  H   KV ++GE +G+C +    V K+R  RR+  +   VE+K+D  
Sbjct: 593  CGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEL 652

Query: 611  QKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXXXXXE 432
            Q E+RIF D GR+LRPLLVV N +      ++   K  +  F  LL N           E
Sbjct: 653  QGEVRIFSDPGRILRPLLVVSNLK------KIKALKGGDYGFQSLLDNGIIELIGPEEEE 706

Query: 431  DAQIACGVDVLQKASLSKGFYPP--FTHCELDPSFLLSLNASLIPFANRNLATRTLYQSE 258
            D + A GV+ + KA       PP  +THCELD SFLL L+  +IPFAN + A R LYQSE
Sbjct: 707  DCRTAWGVEYILKADKEN---PPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSE 763

Query: 257  KHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTL-----------SYQ--CLSKPQLY 117
            KHS+QAIG  T +   R DT+ H+L YPQ+PLFRT+            YQ   L +P+ +
Sbjct: 764  KHSQQAIGFSTVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYF 823

Query: 116  NGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            NGQ AIVAVNVH GYNQEDSLV NRAS++RGMFRS H
Sbjct: 824  NGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 860


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  549 bits (1415), Expect = e-153
 Identities = 298/641 (46%), Positives = 415/641 (64%), Gaps = 19/641 (2%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            IKG EK FIAQE+ C  R+WV + P WM  Y P     + K  +V VKL        +  
Sbjct: 225  IKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRP-----IWKRKRVYVKL--------EPP 271

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
             +E +   EK  + V F    +P+ +LF+ALG SSD E+V +I  + +D  I   +++SI
Sbjct: 272  KDENNRGGEK-VLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASI 330

Query: 1511 YKAESELKD----FRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAML 1344
            ++A+ E +     FR + + + ++D  +K+ K+P   S++E +  +LFP   G ++KA  
Sbjct: 331  HEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARF 390

Query: 1343 LGYMVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLS 1164
            LGYMV CLL +Y GRR+ +N+DD+RNKRLELAGELL R+++V +R   ++++KA+Q++L 
Sbjct: 391  LGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELY 450

Query: 1163 GQKDLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMR 984
            G +DL+ +E Y+D+S+ITNGL+RAFSTG W HP     + +GVVA++++ NPLQ+ ++MR
Sbjct: 451  GDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMR 510

Query: 983  RLRLWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIE 804
            + R  VQY  K+GDARYP+PS+WG+VCF+STPDGENCGLVKNLA+T +VS    + PL++
Sbjct: 511  KTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLD-PLVD 569

Query: 803  FLEKNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIK 624
             L   G+ KL D + +      KVF++G+ +G+C +P S V ++R  RR + +   VEIK
Sbjct: 570  KLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIK 629

Query: 623  KDSQQKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXX 444
            +D QQ E+RIF DAGR+LRPLLVVEN +      ++ TFK  +  F  LL          
Sbjct: 630  RDEQQGEVRIFSDAGRILRPLLVVENLK------KVKTFKGDDFTFQSLLDKGIVELIGA 683

Query: 443  XXXEDAQIACGVDVLQKASLSKGFYPP--FTHCELDPSFLLSLNASLIPFANRNLATRTL 270
               ED   A G+  L K        PP  +THCELD SFLL L+  +IP+AN + A R L
Sbjct: 684  EEEEDCSTAWGIKYLLKGHDD----PPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVL 739

Query: 269  YQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCLSK------------- 129
            YQSEKHS+QAIG  TT+  +R DT  H+L YPQ+PLFRT+   CL K             
Sbjct: 740  YQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPR 799

Query: 128  PQLYNGQNAIVAVNVHYGYNQEDSLVANRASIDRGMFRSMH 6
            P+ +NGQ AIVAVNVH GYNQEDSLV NRAS++RGMFRS H
Sbjct: 800  PEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 840


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  549 bits (1414), Expect = e-153
 Identities = 296/628 (47%), Positives = 414/628 (65%), Gaps = 6/628 (0%)
 Frame = -3

Query: 1871 IKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNEDIKAKKKAK 1692
            IKG EK FIAQE+ C  R+WV + P WM  Y P     + K  +V VKL        +  
Sbjct: 261  IKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRP-----IWKRKRVYVKL--------EPP 307

Query: 1691 DNEPSYASEKDEIVVSFFFITVPVVLLFYALGISSDLEMVQMIGCSHEDREICEFILSSI 1512
             +E +   EK  + V F    +P+ +LF+ALG SSD E+V +I  + +D  I   +++SI
Sbjct: 308  KDENNRGGEK-VLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASI 366

Query: 1511 YKAESELKD----FRSREDVLKYIDDKLKNAKYPSPLSVEEVLDAHLFPFIKGQREKAML 1344
            ++A+ E +     FR + + + ++D  +K+ K+P   S++E +  +LFP   G ++KA  
Sbjct: 367  HEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARF 426

Query: 1343 LGYMVNCLLSSYLGRRQVENKDDYRNKRLELAGELLGRQMQVLLRFLRKKILKAIQKDLS 1164
            LGYMV CLL +Y GRR+ +N+DD+RNKRLELAGELL R+++V +R   ++++KA+Q++L 
Sbjct: 427  LGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELY 486

Query: 1163 GQKDLKSMECYIDSSVITNGLARAFSTGTWPHPTSYAAKCTGVVASMKQVNPLQVLSEMR 984
            G +DL+ +E Y+D+S+ITNGL+RAFSTG W HP     + +GVVA++++ NPLQ+ ++MR
Sbjct: 487  GDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMR 546

Query: 983  RLRLWVQYAAKLGDARYPNPSYWGRVCFISTPDGENCGLVKNLAVTSVVSGNSSEKPLIE 804
            + R  VQY  K+GDARYP+PS+WG+VCF+STPDGENCGLVKNLA+T +VS    + PL++
Sbjct: 547  KTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLD-PLVD 605

Query: 803  FLEKNGIMKLDDVSLSDFHSMTKVFVNGELLGICNNPDSLVQKMRNMRRKQCIDPLVEIK 624
             L   G+ KL D + +      KVF++G+ +G+C +P S V ++R  RR + +   VEIK
Sbjct: 606  KLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIK 665

Query: 623  KDSQQKEIRIFCDAGRLLRPLLVVENQQLCIKQHQLSTFKSCENPFLYLLKNRXXXXXXX 444
            +D QQ E+RIF DAGR+LRPLLVVEN +      ++ TFK  +  F  LL          
Sbjct: 666  RDEQQGEVRIFSDAGRILRPLLVVENLK------KVKTFKGDDFTFQSLLDKGIVELIGA 719

Query: 443  XXXEDAQIACGVDVLQKASLSKGFYPP--FTHCELDPSFLLSLNASLIPFANRNLATRTL 270
               ED   A G+  L K        PP  +THCELD SFLL L+  +IP+AN + A R L
Sbjct: 720  EEEEDCSTAWGIKYLLKGHDD----PPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVL 775

Query: 269  YQSEKHSRQAIGHYTTSLKVRSDTSGHELLYPQKPLFRTLSYQCLSKPQLYNGQNAIVAV 90
            YQSEKHS+QAIG  TT+  +R DT  H+L YPQ+PLFRT+    L +P+ +NGQ AIVAV
Sbjct: 776  YQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTM-ISDLPRPEYFNGQIAIVAV 834

Query: 89   NVHYGYNQEDSLVANRASIDRGMFRSMH 6
            NVH GYNQEDSLV NRAS++RGMFRS H
Sbjct: 835  NVHLGYNQEDSLVMNRASLERGMFRSEH 862