BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013923
         (852 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAR85403.2| high mobility group (HMG)-box protein [Tetrahymen...    59   2e-06
ref|XP_001033066.1| HMG  box family protein [Tetrahymena thermop...    59   2e-06
gb|AAC18874.1| micronuclear linker histone polyprotein [Tetrahym...    59   2e-06
emb|CDJ42846.1| Zgc:136380, related [Eimeria tenella]                  58   4e-06

>gb|EAR85403.2| high mobility group (HMG)-box protein [Tetrahymena thermophila
           SB210]
          Length = 690

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
 Frame = +1

Query: 31  TNCSRKVSSK-KSSLARGAAPLALASQKPDILRISGNNDNSSGKRRAENS-----GSRSV 192
           T+ SR+ SSK KSS+++G      + ++ D     G + +SS  RR  +S     G+RS 
Sbjct: 239 TSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKGTRS- 297

Query: 193 TNSYEQKKDTGRSTASRSGSNSATEKNRTLRSKTKGSLTTKVTKKSPSSDGKIFHLASGA 372
            +S +     GR  ++ +  NS++   R+  SK K S ++K  KKS SS G+    +S  
Sbjct: 298 -SSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSK-NKKSSSSKGR--KSSSSR 353

Query: 373 TNKRDEIKTRGGLVKRSSASDSEKVTEEKESQLTPKPSFYSKVTKKSSVVPLEQKSVSGK 552
             K    K R     +   S S K  +   S  + K    S   +KSS     + S S +
Sbjct: 354 GRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQE 413

Query: 553 EEDLHVDVTLYKDMLNPSFKR 615
            ++ H D +  K M +   KR
Sbjct: 414 RKNSHADTS--KQMEDEGQKR 432


>ref|XP_001033066.1| HMG  box family protein [Tetrahymena thermophila]
           gi|259016283|sp|P40631.2|MLH_TETTS RecName:
           Full=Micronuclear linker histone polyprotein; Short=MIC
           LH; Contains: RecName: Full=Micronuclear linker
           histone-alpha; Contains: RecName: Full=Micronuclear
           linker histone-beta; Contains: RecName:
           Full=Micronuclear linker histone-delta; Contains:
           RecName: Full=Micronuclear linker histone-gamma
          Length = 633

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
 Frame = +1

Query: 31  TNCSRKVSSK-KSSLARGAAPLALASQKPDILRISGNNDNSSGKRRAENS-----GSRSV 192
           T+ SR+ SSK KSS+++G      + ++ D     G + +SS  RR  +S     G+RS 
Sbjct: 182 TSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKGTRS- 240

Query: 193 TNSYEQKKDTGRSTASRSGSNSATEKNRTLRSKTKGSLTTKVTKKSPSSDGKIFHLASGA 372
            +S +     GR  ++ +  NS++   R+  SK K S ++K  KKS SS G+    +S  
Sbjct: 241 -SSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSK-NKKSSSSKGR--KSSSSR 296

Query: 373 TNKRDEIKTRGGLVKRSSASDSEKVTEEKESQLTPKPSFYSKVTKKSSVVPLEQKSVSGK 552
             K    K R     +   S S K  +   S  + K    S   +KSS     + S S +
Sbjct: 297 GRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQE 356

Query: 553 EEDLHVDVTLYKDMLNPSFKR 615
            ++ H D +  K M +   KR
Sbjct: 357 RKNSHADTS--KQMEDEGQKR 375


>gb|AAC18874.1| micronuclear linker histone polyprotein [Tetrahymena thermophila]
          Length = 633

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
 Frame = +1

Query: 31  TNCSRKVSSK-KSSLARGAAPLALASQKPDILRISGNNDNSSGKRRAENS-----GSRSV 192
           T+ SR+ SSK KSS+++G      + ++ D     G + +SS  RR  +S     G+RS 
Sbjct: 182 TSKSRRSSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKGTRS- 240

Query: 193 TNSYEQKKDTGRSTASRSGSNSATEKNRTLRSKTKGSLTTKVTKKSPSSDGKIFHLASGA 372
            +S +     GR  ++ +  NS++   R+  SK K S ++K  KKS SS G+    +S  
Sbjct: 241 -SSRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSK-NKKSSSSKGR--KSSSSR 296

Query: 373 TNKRDEIKTRGGLVKRSSASDSEKVTEEKESQLTPKPSFYSKVTKKSSVVPLEQKSVSGK 552
             K    K R     +   S S K  +   S  + K    S   +KSS     + S S +
Sbjct: 297 GRKASSSKNRKSSKSKDRKSSSSKGRKSSSSSKSNKRKASSSRGRKSSSSKGRKSSKSQE 356

Query: 553 EEDLHVDVTLYKDMLNPSFKR 615
            ++ H D +  K M +   KR
Sbjct: 357 RKNSHADTS--KQMEDEGQKR 375


>emb|CDJ42846.1| Zgc:136380, related [Eimeria tenella]
          Length = 790

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
 Frame = +1

Query: 10   SANEPAKTNCSRKVSSKKSSLARGAAPLALASQKPDILRISGNNDNSSGKRRAENSGSRS 189
            S+N+ + ++ S K SS  SS ++ ++  +  S KP     S ++ + SGKR +++S S S
Sbjct: 609  SSNKSSSSSSSSKSSSSSSSSSKPSSSSSSNSSKP-----SSSSASGSGKRSSDSSSSSS 663

Query: 190  -VTNSYEQKKDTGRSTA--SRSGSNSATEKNRTLRSKTKGSLTTKVTKKSPSSDGKIFHL 360
              ++S    K +G S++  S SGS+S+   + +  S   GS ++  +K S  S       
Sbjct: 664  KPSSSSHSSKSSGSSSSKPSSSGSSSSKPSSSSSSSSKSGSSSSSSSKPSSGSSSSKPSS 723

Query: 361  ASGATNKRDEIKTRGGLVKRSSASDSEKVTEEKESQLTPKPSFYSKVTKKSS 516
            +S +++ +    +     K   +S  ++   E++S  + KP   S  +K SS
Sbjct: 724  SSSSSSSKSGSSSSSSSSKSGDSSSKKRAASEEKSSSSKKPRESSSSSKHSS 775