BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013899
         (566 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra...    55   5e-09
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...    54   7e-09
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra...    54   7e-09
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...    55   9e-09
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...    52   1e-08
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra...    54   7e-08
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra...    54   7e-08
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...    48   1e-07
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...    48   1e-07
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus...    49   4e-07
emb|CBI27055.3| unnamed protein product [Vitis vinifera]               46   3e-06
gb|EXB38291.1| hypothetical protein L484_013924 [Morus notabilis]      50   4e-06
ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843...    50   6e-06

>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Glycine max]
          Length = 877

 Score = 55.1 bits (131), Expect(2) = 5e-09
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
 Frame = -2

Query: 343 GASISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGINQGGL 164
           G+  S TS L + S   ++  +   QGV  +GQ ++G+  G  + +QM Q G+ +NQ  +
Sbjct: 451 GSLTSNTSNLSSSSNIGISQPLGNLQGVVSIGQQVSGMSQGNLSGAQMVQGGVSMNQNVM 510

Query: 163 PGIPAIGVNVAAGTMVPKP--SQP---------XXXXXXXXXXXXXXXXXXQFQNKYVKF 17
            G+    V+   GTM+P P  SQP                             Q+KYVK 
Sbjct: 511 SGLGQSVVSSGTGTMIPTPGMSQPVQSVMQPLVNNAAANMPLSQQTSGGMQSAQSKYVKV 570

Query: 16  WEGVL 2
           WEG L
Sbjct: 571 WEGSL 575



 Score = 31.2 bits (69), Expect(2) = 5e-09
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ + G  P  MH+SNMI +GM
Sbjct: 381 AALSGGTSMGLPSMGQTPVAMHMSNMISSGM 411


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Cucumis sativus]
          Length = 858

 Score = 53.9 bits (128), Expect(2) = 7e-09
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 36/156 (23%)
 Frame = -2

Query: 361 QNTFNSG----ASISGTSGLVA-------QSISSVNANITG------------AQGVPGL 251
           QN F+SG     SI+G+S L          S++S N NI+G             QG   +
Sbjct: 416 QNVFSSGQSGMTSINGSSTLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSV 475

Query: 250 GQSLAGLGHGLATTSQMGQTGMGINQGGLPGIPAIGVNVAAGTMVPKPSQP--------- 98
            QS+ G+  G    +Q+ Q+G+G++Q  +  +   GV+   GTM+P P  P         
Sbjct: 476 SQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQNGMHS 535

Query: 97  ----XXXXXXXXXXXXXXXXXXQFQNKYVKFWEGVL 2
                                 Q Q+KYVKFWEG L
Sbjct: 536 LGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNL 571



 Score = 32.0 bits (71), Expect(2) = 7e-09
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ + G  P  MHVSNMI +GM
Sbjct: 378 AALNGGTSIGLPSMGQTPIAMHVSNMISSGM 408


>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like, partial [Cucumis sativus]
          Length = 595

 Score = 53.9 bits (128), Expect(2) = 7e-09
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 36/156 (23%)
 Frame = -2

Query: 361 QNTFNSG----ASISGTSGLVA-------QSISSVNANITG------------AQGVPGL 251
           QN F+SG     SI+G+S L          S++S N NI+G             QG   +
Sbjct: 416 QNVFSSGQSGMTSINGSSTLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSV 475

Query: 250 GQSLAGLGHGLATTSQMGQTGMGINQGGLPGIPAIGVNVAAGTMVPKPSQP--------- 98
            QS+ G+  G    +Q+ Q+G+G++Q  +  +   GV+   GTM+P P  P         
Sbjct: 476 SQSVPGISQGNLAGTQVVQSGIGVSQNVMSNLTQPGVSSGNGTMIPTPGMPQQVQNGMHS 535

Query: 97  ----XXXXXXXXXXXXXXXXXXQFQNKYVKFWEGVL 2
                                 Q Q+KYVKFWEG L
Sbjct: 536 LGMNNAAANMPLPQHSAGALQQQAQSKYVKFWEGNL 571



 Score = 32.0 bits (71), Expect(2) = 7e-09
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ + G  P  MHVSNMI +GM
Sbjct: 378 AALNGGTSIGLPSMGQTPIAMHVSNMISSGM 408


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score = 54.7 bits (130), Expect(2) = 9e-09
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
 Frame = -2

Query: 343 GASISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGINQGGL 164
           G+  S TS +   S   ++  ++  QG   +GQ++ G+  G     QM Q+G+G+NQ  +
Sbjct: 452 GSFTSATSNMSVNSNLGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMM 511

Query: 163 PGIPAIGVNVAAGTMVPKPS-----QP--------XXXXXXXXXXXXXXXXXXQFQNKYV 23
            G+   G++   GTM+P P      QP                            Q+KYV
Sbjct: 512 SGLGPSGISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYV 571

Query: 22  KFWEGVL 2
           K WEG L
Sbjct: 572 KVWEGNL 578



 Score = 30.8 bits (68), Expect(2) = 9e-09
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQA-SGNAPGMHVSNMIGNGM 433
           A L G  ++G+Q+  G +  MH+SNMI +GM
Sbjct: 382 AALSGGTSIGLQSMGGTSMAMHMSNMISSGM 412


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
 Frame = -2

Query: 358 NTFNSGAS-ISGTSGL-VAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGM 185
           NTF S  S +SG S L ++Q +S++   ++  Q VPG+ Q+L+G         QM Q G+
Sbjct: 432 NTFTSATSNVSGNSNLGMSQPMSNLQGGVSIGQSVPGMNQNLSG--------PQMVQNGI 483

Query: 184 GINQGGLPGIPAIGVNVAAGTMVPKPS------------QPXXXXXXXXXXXXXXXXXXQ 41
           G+N   + G  + G +   GTM+P P                                  
Sbjct: 484 GMNPNMMSGHGSAGSSSGTGTMIPTPGISQQAQSGIQSLGANNSSISNPLSQQTSSALQS 543

Query: 40  FQNKYVKFWEGVL 2
            Q+KYVK WEG L
Sbjct: 544 AQSKYVKVWEGNL 556



 Score = 32.7 bits (73), Expect(2) = 1e-08
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+Q  G  P  MHVSNMI +GM
Sbjct: 373 AALSGGTSIGLQNMGQNPMAMHVSNMISSGM 403


>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Glycine max]
           gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Glycine max]
          Length = 832

 Score = 53.5 bits (127), Expect(2) = 7e-08
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
 Frame = -2

Query: 343 GASISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGINQGGL 164
           G+  S TS L + S   ++  +   QG   +GQ ++G+  G  + +QM Q G+ +NQ  +
Sbjct: 451 GSLTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVM 510

Query: 163 PGIPAIGVNVAAGTMVPKP--SQP---------XXXXXXXXXXXXXXXXXXQFQNKYVKF 17
            G+    V+   GTM+P P  SQP                             Q+KYVK 
Sbjct: 511 SGLGQSVVSSGTGTMIPTPGMSQPVQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKV 570

Query: 16  WEGVL 2
           WEG L
Sbjct: 571 WEGSL 575



 Score = 28.9 bits (63), Expect(2) = 7e-08
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ +    P  MH+SNMI +GM
Sbjct: 381 AALSGGTSMGLPSMSQTPVAMHMSNMISSGM 411


>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X3 [Glycine max]
          Length = 725

 Score = 53.5 bits (127), Expect(2) = 7e-08
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
 Frame = -2

Query: 343 GASISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGINQGGL 164
           G+  S TS L + S   ++  +   QG   +GQ ++G+  G  + +QM Q G+ +NQ  +
Sbjct: 344 GSLTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQVSGMSQGNLSGAQMVQGGVNMNQNVM 403

Query: 163 PGIPAIGVNVAAGTMVPKP--SQP---------XXXXXXXXXXXXXXXXXXQFQNKYVKF 17
            G+    V+   GTM+P P  SQP                             Q+KYVK 
Sbjct: 404 SGLGQSVVSSGTGTMIPTPGMSQPVQSGMQPLVNNAATNMPLSQQTSGGMQSAQSKYVKV 463

Query: 16  WEGVL 2
           WEG L
Sbjct: 464 WEGSL 468



 Score = 28.9 bits (63), Expect(2) = 7e-08
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ +    P  MH+SNMI +GM
Sbjct: 274 AALSGGTSMGLPSMSQTPVAMHMSNMISSGM 304


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
           gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
           hypothetical protein CICLE_v10030710mg [Citrus
           clementina]
          Length = 830

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
 Frame = -2

Query: 349 NSGAS--ISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGIN 176
           NSG +   S  S L   S  S++  +   QG   +GQS+ G+  G  +  QM Q G+ +N
Sbjct: 447 NSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMN 505

Query: 175 QGGLPGIPAIGVNVAAGTMVPKPS---------QP----XXXXXXXXXXXXXXXXXXQFQ 35
           Q  + G+   GV+   GTM+P P          QP                        Q
Sbjct: 506 QNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQ 565

Query: 34  NKYVKFWEGVL 2
           +KYVK WEG L
Sbjct: 566 SKYVKVWEGSL 576



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+Q+ G  P  MH+SNMI +GM
Sbjct: 381 AALTGGTSIGLQSMGQTPMAMHMSNMISSGM 411


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
 Frame = -2

Query: 349 NSGAS--ISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGIN 176
           NSG +   S  S L   S  S++  +   QG   +GQS+ G+  G  +  QM Q G+ +N
Sbjct: 446 NSGLNSFTSAPSNLSGNSNPSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQNGISMN 504

Query: 175 QGGLPGIPAIGVNVAAGTMVPKPS---------QP----XXXXXXXXXXXXXXXXXXQFQ 35
           Q  + G+   GV+   GTM+P P          QP                        Q
Sbjct: 505 QNMMSGLGPSGVSSGTGTMIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQ 564

Query: 34  NKYVKFWEGVL 2
           +KYVK WEG L
Sbjct: 565 SKYVKVWEGSL 575



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+Q+ G  P  MH+SNMI +GM
Sbjct: 380 AALTGGTSIGLQSMGQTPMAMHMSNMISSGM 410


>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
          Length = 863

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
 Frame = -2

Query: 343 GASISGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQTGMGINQGGL 164
           G+  S TS L + S   ++  +   QG   +GQ  +G+  G  +  QM Q G+ +NQ  +
Sbjct: 454 GSLTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQASGMSQGNLSGPQMVQGGVPMNQNAM 513

Query: 163 PGIPAIGVNVAAGTMVPKPSQPXXXXXXXXXXXXXXXXXXQF-----------QNKYVKF 17
             + +  V+   GTM+P P                                  Q+KYVK 
Sbjct: 514 SALGSSVVSSGNGTMIPTPGMSQQVQSGMQALGNNAAANMPLSQQTSGGMQSAQSKYVKV 573

Query: 16  WEGVL 2
           WEG L
Sbjct: 574 WEGSL 578



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQASGNAP-GMHVSNMIGNGM 433
           A L G  ++G+ + G  P  MH+SNMI +GM
Sbjct: 384 AALSGGTSMGLPSMGQTPVAMHMSNMISSGM 414


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
 Frame = -2

Query: 364 TQNTFNSG----ASISGTSGL-----VAQ-----SISSVNANITGAQGVPGLGQSLA-GL 230
           TQ  F+SG    +SI+G+  L     VAQ     S +S  +N++    + G+ Q L  G+
Sbjct: 419 TQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNL-GISQPLIPGM 477

Query: 229 GHGLATTSQMGQTGMGINQGGLPGIPAIGVNVAAGTMVPKPS-----QP--------XXX 89
             G     QM Q+G+G+NQ  + G+   G++   GTM+P P      QP           
Sbjct: 478 SQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGMPSLGVNNNA 537

Query: 88  XXXXXXXXXXXXXXXQFQNKYVKFWEGVL 2
                            Q+KYVK WEG L
Sbjct: 538 AANMPLPQQTSGAMQTAQSKYVKVWEGNL 566



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 522 ATLPGANALGIQA-SGNAPGMHVSNMIGNGM 433
           A L G  ++G+Q+  G +  MH+SNMI +GM
Sbjct: 382 AALSGGTSIGLQSMGGTSMAMHMSNMISSGM 412


>gb|EXB38291.1| hypothetical protein L484_013924 [Morus notabilis]
          Length = 1038

 Score = 49.7 bits (117), Expect(2) = 4e-06
 Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
 Frame = -2

Query: 367 VTQNTFNSGASI--SGTSGLVAQSISSVNANITGAQGVPGLGQSLAGLGHGLATTSQMGQ 194
           +TQ T   G S   + TS +   S   V+  +   QG   +GQS+  +  G  + +QM Q
Sbjct: 521 LTQVTQTPGLSTFSAATSNVSGNSNIGVSQPMNNLQGGVSMGQSVPTMSQGNISGAQMVQ 580

Query: 193 TGMGINQGGLPGIPAIGVNVAAGTMVPKPSQPXXXXXXXXXXXXXXXXXXQF-------- 38
           TGMG+NQ  + G+    V+   GTM+P P                               
Sbjct: 581 TGMGMNQNMISGLGQSVVSSGTGTMMPTPGMSQQVQSGMQPLGVNNNSAASIPMSQQAST 640

Query: 37  ---QNKYVKFWEGVL 2
               +KYVK WEG L
Sbjct: 641 APQASKYVKVWEGNL 655



 Score = 26.6 bits (57), Expect(2) = 4e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 480 GNAP-GMHVSNMIGNGM 433
           G  P GMH+SNMI NGM
Sbjct: 479 GQTPIGMHMSNMISNGM 495


>ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
           distachyon]
          Length = 771

 Score = 50.4 bits (119), Expect(2) = 6e-06
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
 Frame = -2

Query: 376 AQNVTQNTF-----NSGASISGTSGL-VAQSISSVNANITGAQGVPGLGQS-LAGLGHGL 218
           AQ + QNT      ++ +++SG S + V+ S++++  NI  AQ VP + Q  L    HG 
Sbjct: 422 AQQLVQNTALGSFGSNNSTVSGNSNVAVSSSLANIQNNIATAQSVPPMAQGGLMSGSHG- 480

Query: 217 ATTSQMGQTGMGINQGGLP-----------------------GIPAIGVNVAAGTMVPKP 107
              SQ GQ G+G NQ  +                        G+ ++ VN ++   +P P
Sbjct: 481 ---SQSGQGGIGTNQNMISSLGPTAISSAPAMMPTPGMTQQAGVNSLSVNNSSAMNMPMP 537

Query: 106 SQPXXXXXXXXXXXXXXXXXXQFQNKYVKFWEGVL 2
            QP                    Q+KYVK WEG L
Sbjct: 538 QQPNGQQ----------------QSKYVKIWEGTL 556



 Score = 25.4 bits (54), Expect(2) = 6e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 519 TLPGANALGIQASGNAPGMHVSNMIGNGM 433
           +L GA ++G         +H+SNMI +GM
Sbjct: 375 SLSGATSMGPNMGATPIQVHMSNMISSGM 403