BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013601
         (2555 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3...   550   e-153
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   550   e-153
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec...   547   e-152
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr...   546   e-152
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   536   e-149
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   534   e-149
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus...   528   e-147
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C...   527   e-147
gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus pe...   526   e-146
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec...   525   e-146
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec...   524   e-146
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...   522   e-145
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   521   e-145
ref|XP_002300333.2| zinc finger family protein [Populus trichoca...   520   e-144
ref|XP_006846022.1| hypothetical protein AMTR_s00155p00079840 [A...   514   e-143
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...   513   e-142
ref|NP_174334.2| cleavage and polyadenylation specificity factor...   509   e-141
ref|XP_001753463.1| predicted protein [Physcomitrella patens] gi...   509   e-141
ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arab...   507   e-141
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...   504   e-140

>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
          Length = 698

 Score =  550 bits (1417), Expect = e-153
 Identities = 317/667 (47%), Positives = 394/667 (59%), Gaps = 8/667 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 71   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNG DCRYRH         V E+ ++IQQ+   ++ N N++ Q+ +    
Sbjct: 131  ECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQL---SSYNYNKFFQQRNSGFA 187

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLL-NSRNGLTNEP 2016
            +  ++     G +  ++G  G+ S                        + N  NG +N+ 
Sbjct: 188  QQTEKSQIPQGQNNVNQGAGGKPSTTESANMHPQQQVQQPQQQVSQTQIQNVPNGQSNQA 247

Query: 2015 SVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILVF 1836
            +    A PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+F
Sbjct: 248  N--KTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 305

Query: 1835 SVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLRN 1656
            SVN TRHFQGCA+MTSKIGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLRN
Sbjct: 306  SVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 365

Query: 1655 PMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSAH 1476
            P NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE KREEEK +G NS +
Sbjct: 366  PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREEEKAKGVNSDN 425

Query: 1475 ESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKG--WRGPRGNNRSVGGSK 1302
              E+P+IVPF               E+ S   +A+QGRG+ +G  W       R      
Sbjct: 426  GGENPDIVPFEDNEEEEEEESEEEDESFS---AAAQGRGRGRGVMWPPHMPLARGARPMP 482

Query: 1301 GM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAMM 1125
            GM G+P  M+ GDGF    +G  + DGF +PD+F A         F   GPRF       
Sbjct: 483  GMRGFPPMMMGGDGFS---YGPVTPDGFGVPDLFGAPRP------FPPYGPRFSG----- 528

Query: 1124 FAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPGS 945
                D +G A GM+F  RPP     P AM PAG        G    M  GR  FM G G 
Sbjct: 529  ----DFTGPASGMMFPGRPPQ----PGAMFPAG--------GLGMMMGPGRAPFMGGMGP 572

Query: 944  LG----RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQAS 777
             G    R  RP  M                      + +  ND+       G   +    
Sbjct: 573  TGANPVRGGRPVSMPPMFPPPPAPSSQNSGRAVKRDQRTPTNDRYGAGSEQGRGQEMAGP 632

Query: 776  GEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRRREW 597
            G  L+ + + + +G   H +   +  GN   +  NDESESEDEAPRRSR+GEGKK+RR  
Sbjct: 633  GGRLDDETQYQQEGQKAHHED-QFAAGN---SFRNDESESEDEAPRRSRYGEGKKKRRSL 688

Query: 596  DGDEVEG 576
            +GD+  G
Sbjct: 689  EGDDANG 695


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  550 bits (1417), Expect = e-153
 Identities = 323/665 (48%), Positives = 392/665 (58%), Gaps = 16/665 (2%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 58   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 117

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNG DCRYRH         + E++++IQQ+     G++NR+ Q  +PYN+
Sbjct: 118  ECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNPYNQ 177

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNEPS 2013
            +  ++     G +  + G + + S                    Q  + N  NGL N+ +
Sbjct: 178  QT-EKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQNLPNGLPNQAN 236

Query: 2012 VPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILVFS 1833
                ASPLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+FS
Sbjct: 237  --KTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFS 294

Query: 1832 VNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLRNP 1653
            VN TRHFQGCA+MTSKIGG VGG  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLRNP
Sbjct: 295  VNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 354

Query: 1652 MNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSAHE 1473
             NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G N  + 
Sbjct: 355  YNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDNG 414

Query: 1472 SEDPNIVPFXXXXXXXXXXXXXXXETSSQTRS-ASQGRGKAKGWRGPRGNNRSVGG---S 1305
             E+P+IVPF               E+  Q    A+QGRG+ +G   P     + G     
Sbjct: 415  GENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLARGARPIP 474

Query: 1304 KGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAMM 1125
               G+P  M+  DGF +        DGF MPDIF     G G   F   GPRF       
Sbjct: 475  SMRGFPPVMMGADGFSYSAV---PPDGFAMPDIF-----GVGPRAFPPYGPRFSG----- 521

Query: 1124 FAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG- 948
                D +G A GM+F  R    A+FPA             +G    M  GR  FM G G 
Sbjct: 522  ----DFTGPASGMMFPGRGQPGAVFPA-------------SGYGMMMGPGRAPFMGGMGV 564

Query: 947  ---SLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQAS 777
               +  R  RP GM                     P NS  N    DQR   ++   + S
Sbjct: 565  PAAAPTRAGRPVGM-------------PPMFPPPPPPNSQNNRTKRDQRTPVNDRNDRYS 611

Query: 776  GEGLEADREPEIQGP--------AKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGE 621
            G G +  R  ++ GP            QQ     G NS+   NDESESEDEAPRRSRHGE
Sbjct: 612  G-GSDQGRGQDMAGPDDETQYLQGLKSQQDDQFGGGNSF--RNDESESEDEAPRRSRHGE 668

Query: 620  GKKRR 606
            GKK+R
Sbjct: 669  GKKKR 673


>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Citrus sinensis]
          Length = 683

 Score =  547 bits (1409), Expect = e-152
 Identities = 320/676 (47%), Positives = 400/676 (59%), Gaps = 21/676 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 53   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 112

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+    +GN N++ Q+   ++ 
Sbjct: 113  ECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFSH 172

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPF--LLNSRNGLTNE 2019
            +  + + S  G +  ++G  G+ S                         + N  NGL N+
Sbjct: 173  QTDKSQFSQ-GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQ 231

Query: 2018 PSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILV 1839
             +    A+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+
Sbjct: 232  TN--RNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 289

Query: 1838 FSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLR 1659
            FSVN TRHFQGCA+MTSKIGG+VGG  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLR
Sbjct: 290  FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 349

Query: 1658 NPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSA 1479
            NP NENLPVKISRDCQELE SIG+QL +LLY EPDSELMA++ AAE KREEEK +G N  
Sbjct: 350  NPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPD 409

Query: 1478 HESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKG--WRGPRGNNRSVGGS 1305
            +  ++P+IVPF               E      +ASQGRG+ +G  W GP    R     
Sbjct: 410  NGGDNPDIVPF---EDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLARGARPV 466

Query: 1304 KGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
             GM G+P  M+  DGF +      + DGF MPD+F     G     F   GPRF      
Sbjct: 467  PGMRGFPPMMIGADGFSYG----VTPDGFPMPDLF-----GVAPRPFAPYGPRFS----- 512

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
                  G G   GM+F  RPP     P ++ P               M  GRP FM G G
Sbjct: 513  --GDFTGPG---GMMFPGRPPQ----PGSVFPPN-------GFGGMMMGPGRPPFMGGMG 556

Query: 947  SLG---RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGS-NWQRQA 780
                  R  RP G+                     P++S  + + A +   GS N +   
Sbjct: 557  PAATNPRGGRPVGV--------------PPPFPNQPQSSQNSSRAAKRDVRGSINDRNDR 602

Query: 779  SGEGLEADREPEIQGPAK-------HRQQGGY-----NYGNNSYTANNDESESEDEAPRR 636
               G +  R  E+ GP +       ++Q+G        YG+ ++   NDESESEDEAPRR
Sbjct: 603  YSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF--RNDESESEDEAPRR 660

Query: 635  SRHGEGKKRRREWDGD 588
            SRHGEGKK+RR+ +GD
Sbjct: 661  SRHGEGKKKRRDSEGD 676


>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
            gi|557551535|gb|ESR62164.1| hypothetical protein
            CICLE_v10014454mg [Citrus clementina]
          Length = 701

 Score =  546 bits (1406), Expect = e-152
 Identities = 320/676 (47%), Positives = 400/676 (59%), Gaps = 21/676 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 71   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+    +GN N+  Q+   ++ 
Sbjct: 131  ECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKLFQQRGAFSH 190

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPF--LLNSRNGLTNE 2019
            +  + + S  G +  ++G  G+ S                         + N  NGL N+
Sbjct: 191  QIDKSQFSQ-GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQ 249

Query: 2018 PSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILV 1839
             +    A+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+
Sbjct: 250  TN--RNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307

Query: 1838 FSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLR 1659
            FSVN TRHFQGCA+MTSKIGG+VGG  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLR
Sbjct: 308  FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 367

Query: 1658 NPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSA 1479
            NP NENLPVKISRDCQELE SIG+QL +LLY EPDSELMA++ AAE KREEEK +G N  
Sbjct: 368  NPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPD 427

Query: 1478 HESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKG--WRGPRGNNRSVGGS 1305
            +  ++P+IVPF               E      +ASQGRG+ +G  W GP    R     
Sbjct: 428  NGGDNPDIVPF---EDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLARGARPV 484

Query: 1304 KGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
             GM G+P  M+  DGF +      + DGF MPD+F     G     F   GPRF      
Sbjct: 485  PGMRGFPPMMIGADGFSYG----VTPDGFPMPDLF-----GVAPRPFAPYGPRFS----- 530

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
                  G G   GM+F  RPP     P ++ P               M  GRP FM G G
Sbjct: 531  --GDFTGPG---GMMFPGRPPQ----PGSVFPPN-------GFGGMMMGPGRPPFMGGMG 574

Query: 947  SLG---RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGS-NWQRQA 780
                  R  RP G+                     P++S  + ++A +   GS N +   
Sbjct: 575  PAATNPRGGRPVGV--------------PPPFPNQPQSSQNSSRVAKRDVRGSINDRNDR 620

Query: 779  SGEGLEADREPEIQGPAK-------HRQQGGY-----NYGNNSYTANNDESESEDEAPRR 636
               G +  R  E+ GP +       ++Q+G        YG+ ++   NDESESEDEAPRR
Sbjct: 621  YSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF--RNDESESEDEAPRR 678

Query: 635  SRHGEGKKRRREWDGD 588
            SRHGEGKK+RR+ +GD
Sbjct: 679  SRHGEGKKKRRDSEGD 694


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  536 bits (1380), Expect = e-149
 Identities = 321/664 (48%), Positives = 385/664 (57%), Gaps = 14/664 (2%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DKARMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 68   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIK 127

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFP-TANGNNNRYQQRYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ +F    N +N  +QQR   YN
Sbjct: 128  ECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQQRGASYN 187

Query: 2195 K--EDGQRKSSTAGVSQRSRG-PLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLT 2025
            +  E  Q    T   +Q   G PL  +S                       + N  NG  
Sbjct: 188  QQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVNQSQ---MQNVANGQP 244

Query: 2024 NEPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVI 1845
            N+ +    A+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVI
Sbjct: 245  NQAN--RTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVI 302

Query: 1844 LVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYH 1665
            LVFSVN TRHFQGCA+MTS+IGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT H
Sbjct: 303  LVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 362

Query: 1664 LRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTN 1485
            LRNP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G N
Sbjct: 363  LRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVN 422

Query: 1484 SAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQ-TRSASQGRGKAKG--WRGPRGNNRSV 1314
              +  E+P+IVPF               E+ S     A QGRG+ +G  W       R  
Sbjct: 423  PDNGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPLGRGA 482

Query: 1313 GGSKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQ 1134
                GM     ++ GDG  +   G    DGF MPD+F    +G     F   GPRF    
Sbjct: 483  RPMPGMQGFNPVMMGDGLSYGPVGPVGPDGFGMPDLFGVGPRG-----FAPYGPRFSG-- 535

Query: 1133 AMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTG 954
                   D  G    M+F+ RP    MFP+              G    M+ GR  FM G
Sbjct: 536  -------DFGGPPAAMMFRGRPSQPGMFPS-------------GGFGMMMNPGRGPFMGG 575

Query: 953  PGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQASG 774
             G +G  N P+G                      P+N+    K  DQR +  N  R  SG
Sbjct: 576  MG-VGGANPPRG------GRPVNMPPMFPPPPPLPQNANRAAK-RDQRTADRN-DRFGSG 626

Query: 773  --EGLEADREPEIQGPAKHRQ-QGGYNYGNNSYTA----NNDESESEDEAPRRSRHGEGK 615
              +G   D   +  GP    Q Q GY    + + A     ND+SESEDEAPRRSRHGEGK
Sbjct: 627  SEQGKSQDMLSQSGGPDDDAQYQQGYKGNQDDHPAVNNFRNDDSESEDEAPRRSRHGEGK 686

Query: 614  KRRR 603
            K+ +
Sbjct: 687  KKHK 690


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  534 bits (1376), Expect = e-149
 Identities = 315/670 (47%), Positives = 392/670 (58%), Gaps = 11/670 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 71   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 130

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+     G++N++ Q+     +
Sbjct: 131  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNKFFQQRGAGFQ 190

Query: 2192 EDGQRKSSTAGVSQRSRG----PLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLT 2025
            +   +   + G +   +G    P G +S                    Q         L 
Sbjct: 191  QHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQATQTPTQNLP 250

Query: 2024 N-EPSVPS-AASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDN 1851
            N +P+  +  A PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +N
Sbjct: 251  NGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 310

Query: 1850 VILVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKT 1671
            VIL+FSVN TRHFQGCA+MTSKIG +VGG  WK+A+GT+HYGRNF +KWLKLCELSFHKT
Sbjct: 311  VILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 370

Query: 1670 YHLRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQG 1491
             HLRNP NENLPVKISRDCQELE S+G QL  LLY EPDSELMA++ AAE KREEEK +G
Sbjct: 371  RHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAKG 430

Query: 1490 TNSAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSA-SQGRGKAKGWRGPR----GN 1326
             N  +  ++P+IVPF               E+  Q   A  QGRG+ +G   P       
Sbjct: 431  VNPENGGDNPDIVPFEDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIWPHMPLARG 490

Query: 1325 NRSVGGSKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRF 1146
             R + G +  G+P  M+  D F    +G  + DGF MPD+F   +  RGF+ +    PRF
Sbjct: 491  ARPIPGMR--GFPPMMMGADSFS---YGPVTPDGFGMPDLFG--VAPRGFTPY---APRF 540

Query: 1145 GQPQAMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPN 966
                       D +G A GM+F  RPP     P  + P G     +  G  P+M    PN
Sbjct: 541  SG---------DFTGAASGMMFPGRPPQ----PGGVFPNGGFGMMMGPGRAPFMGGMGPN 587

Query: 965  FMTGPGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQR 786
              T P    R N P GM +                    +    ND+     ++GS+  R
Sbjct: 588  -STNP---LRGNWPGGMPF-----PPLPTPSPQRPVKRDQRMTANDRY----STGSDQGR 634

Query: 785  QASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRR 606
              +GE  +  R  +    A H  Q G     NS+   NDESESEDEAPRRSRHGEGKK+R
Sbjct: 635  NTAGEPDDEARYQQEGLKASHEDQFG---AGNSF--RNDESESEDEAPRRSRHGEGKKKR 689

Query: 605  REWDGDEVEG 576
            R  +GD   G
Sbjct: 690  RGSEGDATPG 699


>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
          Length = 697

 Score =  528 bits (1361), Expect = e-147
 Identities = 321/664 (48%), Positives = 383/664 (57%), Gaps = 14/664 (2%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DKARMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 66   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIK 125

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFP-TANGNNNRYQQRYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ ++    N +N  +QQR   Y 
Sbjct: 126  ECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSYT 185

Query: 2195 K--EDGQRKSSTAGVSQRSRG-PLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLT 2025
            +  E  Q    T   +Q   G PL  +S                    Q  + N  NG  
Sbjct: 186  QQAEKSQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQQVSQNQ--IQNVANGQP 243

Query: 2024 NEPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVI 1845
            N+ S   AA+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVI
Sbjct: 244  NQAS--RAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVI 301

Query: 1844 LVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYH 1665
            L+FSVN TRHFQGCA+MTS+IGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT H
Sbjct: 302  LIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 361

Query: 1664 LRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTN 1485
            LRNP NENLPVKISRDCQELE SIG+QL SLLY EPD ELMAV+ AAE+KREEEK +G N
Sbjct: 362  LRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVN 421

Query: 1484 SAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQ-TRSASQGRGKAKG--WRGPRGNNRSV 1314
              +  E+P+IVPF               E+       A QGRG+ +G  W       R  
Sbjct: 422  PDNGGENPDIVPFEDNEEEEEEESDEEDESFGHGVGPAGQGRGRGRGMMWPPHMPLPRGA 481

Query: 1313 GGSKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQ 1134
                GM     ++ GDG     +G  + DGF MPD+F+      G   F   GPRF    
Sbjct: 482  RPMPGMQGFNPVMMGDGLS---YGPVAPDGFGMPDLFSV-----GPRAFAPYGPRFSG-- 531

Query: 1133 AMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTG 954
                   D  G    M+F+ RP    MFP               G    M+ GR  FM G
Sbjct: 532  -------DFGGPPAAMMFRGRPSQPGMFPG-------------GGFGMMMNPGRGPFMGG 571

Query: 953  PGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQASG 774
             G  G  N P+G                      P+N+    K  DQR +  N  R  SG
Sbjct: 572  MGVAGA-NPPRG------GRPVNMPPMFPPPPPLPQNTNRLAK-RDQRTTDRN-DRYGSG 622

Query: 773  --EGLEADREPEIQGPAKHRQ-QGGYNYGNNSYTA----NNDESESEDEAPRRSRHGEGK 615
              +G   D   +   P    Q Q GY    + + A     ND+SESEDEAPRRSRHGEGK
Sbjct: 623  SEQGKSQDMLSQSGAPDDDMQYQQGYKANQDDHPAVNNFRNDDSESEDEAPRRSRHGEGK 682

Query: 614  KRRR 603
            K+RR
Sbjct: 683  KKRR 686


>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
            notabilis]
          Length = 710

 Score =  527 bits (1358), Expect = e-147
 Identities = 315/681 (46%), Positives = 387/681 (56%), Gaps = 22/681 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKG+ CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 74   RSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 133

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ +      +N  +QQR      
Sbjct: 134  ECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHSNKFFQQRNAGGFA 193

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDS--XXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNE 2019
            + G++     G +  S+G +G+ S                      Q  + N   GL N+
Sbjct: 194  QLGEKPLLPLGPNAVSQGVVGKPSILESANVQQPQQQVQPSQQPVGQNQIQNVFTGLPNQ 253

Query: 2018 PSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILV 1839
             +     +PLP G SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFD  +NVIL+
Sbjct: 254  AN--RTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDCAENVILI 311

Query: 1838 FSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLR 1659
            FSVN TRHFQGCA+M S+IGG++ G  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLR
Sbjct: 312  FSVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 371

Query: 1658 NPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSA 1479
            NP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G +  
Sbjct: 372  NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVDPD 431

Query: 1478 HESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKGWRGPRGNNRSVGG--- 1308
            +  E+P+IVPF               E+ SQ   A+QGRG+ +G   P     S G    
Sbjct: 432  NGGENPDIVPFEDNEEDEEEESEDEEESFSQVLGANQGRGRGRGVMWPPHMPLSRGARPM 491

Query: 1307 SKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
                G+P  M+  DG     +G  + DGF MPD+F       G   F   GPRF      
Sbjct: 492  PSMQGFPPVMIGADG---SPYGPVTPDGFPMPDLFNV-----GPRAFNPYGPRF------ 537

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
               P D  G   GM+F+ RP      P A+ P G        G    M  GR   M G G
Sbjct: 538  ---PGDFMGPTSGMMFRGRPTQ----PGAVFPGG--------GFGMMMGPGRAPCMGGMG 582

Query: 947  SLG----RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQA 780
              G    R  RP  M                     P  +       DQR   +N + + 
Sbjct: 583  VQGTSPARPMRPGAM------------PPMFQQPPPPSQNMNRPPRRDQRGL-ANDRNER 629

Query: 779  SGEGLEADREPEIQGP-------------AKHRQQGGYNYGNNSYTANNDESESEDEAPR 639
             G G +  R  E+ GP             AK RQ+  Y  GN   +  NDESESEDEAPR
Sbjct: 630  YGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKARQEDQYGAGN---SFRNDESESEDEAPR 686

Query: 638  RSRHGEGKKRRREWDGDEVEG 576
            RSRHG+GKK+RR  + D   G
Sbjct: 687  RSRHGDGKKKRRSSEEDAATG 707


>gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
          Length = 695

 Score =  526 bits (1356), Expect = e-146
 Identities = 305/665 (45%), Positives = 381/665 (57%), Gaps = 10/665 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R+YRQTVCRHWLR LCMKG+ CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 66   RSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 125

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ +       +N++ Q+ +    
Sbjct: 126  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNKFYQQRNAGFP 185

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLL-NSRNGLTNEP 2016
            +   +  S  G +   +G +G+ S                          N  NGL N+ 
Sbjct: 186  QQADKYQSAQGPNSVYQGVVGKPSTGESANVHQQQQVQQTQQQVGHTQTQNLPNGLANQA 245

Query: 2015 SVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILVF 1836
            +    ++PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+F
Sbjct: 246  N---RSAPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVILIF 302

Query: 1835 SVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLRN 1656
            SVN TRHFQGCA+M S+IGG+V G  WK+A+G++HYGRNF +KWLKLCELSFHKT HLRN
Sbjct: 303  SVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCELSFHKTRHLRN 362

Query: 1655 PMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSAH 1476
            P NENLPVKISRDCQELE SIG+QL SLLY EPDSELMAV+ AAE+KREEEK +G N  +
Sbjct: 363  PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREEEKAKGVNPEN 422

Query: 1475 ESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRS-ASQGRGKAKG---WRGPRGNNRSVGG 1308
              E+P+IVPF               E+        ++GRG+ +G   W       R    
Sbjct: 423  GGENPDIVPFEDNEEEEEEESDDEEESFGPVPGVGNEGRGRGRGGIMWPPHMPLARGGRP 482

Query: 1307 SKGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQA 1131
              GM G+P GM+  D   +      + DGF MP+ F    +G     F   GPRF     
Sbjct: 483  MPGMQGFPPGMMGADAMPYG----PAPDGFGMPNPFGVGPRG-----FNPYGPRFSG--- 530

Query: 1130 MMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGP 951
                  D +G  PGM+F+ RP      P               G    M  GR  FM G 
Sbjct: 531  ------DFTGPTPGMMFRGRPQQPGFPP--------------GGYGMMMGPGRAPFMGGM 570

Query: 950  G----SLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQ 783
            G    + GR  RP GM                       ++  N++ +    SG    ++
Sbjct: 571  GVGGANPGRPGRPTGMSPMFPPPSSQNTNRMQKRDPRGPSNDRNERYS--AGSGQGKGQE 628

Query: 782  ASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRRR 603
              G     D E   Q  +K  ++  Y  GNNS    ND+SESEDEAPRRSRHGEGKK+ R
Sbjct: 629  IPGLAGGPDDEARYQQASKAYREDQYGAGNNS---RNDDSESEDEAPRRSRHGEGKKKGR 685

Query: 602  EWDGD 588
              +GD
Sbjct: 686  GSEGD 690


>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Fragaria vesca subsp. vesca]
          Length = 689

 Score =  525 bits (1351), Expect = e-146
 Identities = 313/666 (46%), Positives = 383/666 (57%), Gaps = 11/666 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            +++RQTVCRHWLR LCMKG+ CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 64   KSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRMYGECREQDCVYKHTNEDIK 123

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYH---P 2202
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ +      N+N++ Q  +   P
Sbjct: 124  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNNSNKFSQPRNGGFP 183

Query: 2201 YNKEDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTN 2022
               +  Q    T   +Q    P   +S                         +  NGL +
Sbjct: 184  QQHDRSQPAQVTNSFNQVVVRPSAAESANVQQPQQFQQTQQPVAQTQAQ---SVPNGLAS 240

Query: 2021 EPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVIL 1842
            + +   AA PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL
Sbjct: 241  QAN--RAALPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVIL 298

Query: 1841 VFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHL 1662
            +FSVN TRHFQGCA+M S+IGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT HL
Sbjct: 299  IFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 358

Query: 1661 RNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNS 1482
            RNP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G N 
Sbjct: 359  RNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNP 418

Query: 1481 AHESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKGWRGPRGNNRSVGGSK 1302
             +  E+P+IVPF               E       A + RG+ +    P   +  +GG  
Sbjct: 419  ENGGENPDIVPF-EDNEEEEEEESDDEEDYQVPGGAIENRGRGRVMWPP---HMPLGGRG 474

Query: 1301 G------MGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQ 1140
            G       G+P GM+  D      +G  + DGFVMP            + FG  GPR   
Sbjct: 475  GRPMPGMQGFP-GMMGPDAM---PYGPVTPDGFVMP------------NPFGMGGPRGFN 518

Query: 1139 PQAMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYM-SMGRPNF 963
            P    F+  D  G  PGM+F+ RPP     P  M P G     +  G  P+M  MG    
Sbjct: 519  PYGPRFSG-DFGGPNPGMMFRGRPPQ----PGGMFPPGPYGMMMGPGRGPFMGGMG---- 569

Query: 962  MTGPGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRA-SGSNWQR 786
              G  +  R  RP GM                          GND+     A SG   + 
Sbjct: 570  -VGGNNPARGGRPGGM--PPMFPPHPPSQNNNRLQKRDPRGSGNDRNERYSAGSGHGKEM 626

Query: 785  QASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRR 606
            QA G     D E   Q  +K  Q+  Y  GNN     ND+SESEDEAPRRSRHGEGKK+R
Sbjct: 627  QAGG----PDDENHYQHSSKSYQE-DYGAGNN---GRNDDSESEDEAPRRSRHGEGKKKR 678

Query: 605  REWDGD 588
            R+ +GD
Sbjct: 679  RDSEGD 684


>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cicer arietinum]
          Length = 677

 Score =  524 bits (1349), Expect = e-146
 Identities = 311/665 (46%), Positives = 383/665 (57%), Gaps = 14/665 (2%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKG+ CG+LHQ DKARMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 63   RSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIK 122

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRY-QQRYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         + E+ ++IQ ++     N++++ QQR   Y 
Sbjct: 123  ECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHKFIQQRGSSYT 182

Query: 2195 KEDGQRKSSTAGVSQRSRG----PLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGL 2028
            ++  ++     G++  ++G    PL  +S                       L N +   
Sbjct: 183  QQV-EKSQFPQGINSANQGVAGKPLAAESGNVQQQQQVQQSQQQVSQIQTQNLANGQPNQ 241

Query: 2027 TNEPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNV 1848
             N       A+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NV
Sbjct: 242  ANR-----TATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENV 296

Query: 1847 ILVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTY 1668
            IL+FSVN TRHFQGCA+MTS+IGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT 
Sbjct: 297  ILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 356

Query: 1667 HLRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGT 1488
            HLRNP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G 
Sbjct: 357  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGV 416

Query: 1487 NSAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQ-TRSASQGRGKAKG--WRGPRGNNRS 1317
            N  +  E+P+IVPF               E+  Q      QGRG+ +G  W       R 
Sbjct: 417  NPDNAGENPDIVPFEDNEEEEEEESDEEEESFVQAVVPVGQGRGRGRGMMWPPHMPLGRG 476

Query: 1316 VGGSKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQP 1137
                 GM     ++ GDG     +G  + DGF MPD+F     G G   FG  GPRF   
Sbjct: 477  ARPMPGMQGFNPVMMGDGLS---YGPGAPDGFGMPDLF-----GMGPRGFGPYGPRFSG- 527

Query: 1136 QAMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMT 957
                    D +G    M+F+ RP    MFP               G    M+ GR  FM 
Sbjct: 528  --------DFAGPPAAMMFRGRPSQPGMFPG-------------GGFGMMMNPGRGPFMG 566

Query: 956  GPGSLG----RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQ 789
            G G  G    R  RP  M                     P+N     K  DQR +  N  
Sbjct: 567  GMGVPGPNPPRGGRPLNM-----------PPMFPPPPPPPQNVNRIAK-RDQRTNDRN-D 613

Query: 788  RQASG--EGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGK 615
            R +SG  +G   D   +  GP    Q        N++   N++SESEDEAPRRSRHGEGK
Sbjct: 614  RYSSGQEQGKSQDMLSQSGGPDDEMQYQQSGAPANNF--RNEDSESEDEAPRRSRHGEGK 671

Query: 614  KRRRE 600
            KR+ E
Sbjct: 672  KRKGE 676


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cucumis sativus]
          Length = 707

 Score =  522 bits (1344), Expect = e-145
 Identities = 309/664 (46%), Positives = 377/664 (56%), Gaps = 9/664 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMPICRFF   GECRE DCVYKH+++DIK
Sbjct: 73   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDIK 132

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQRYHPYNK 2193
            ECNMYK GFCPNGPDCRYRH         + E+ ++IQ +     G +N++  +      
Sbjct: 133  ECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPSNKFFTQRGVGLS 192

Query: 2192 EDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNEPS 2013
            +  ++       +  ++G  G+ S                    Q  + +  NG  N+  
Sbjct: 193  QQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQASQTPVQSLSNGQPNQ-- 250

Query: 2012 VPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILVFS 1833
            +   A+ LPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS DNVIL+FS
Sbjct: 251  LNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFS 310

Query: 1832 VNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLRNP 1653
            VN TRHFQGCA+M S+IGG+V G  WK+A+GT HYG+NF LKWLKLCELSF KT HLRNP
Sbjct: 311  VNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCELSFQKTRHLRNP 370

Query: 1652 MNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSAHE 1473
             NENLPVKISRDCQELE S+G+QL SLLY EPD ELMAV+ AAE+KREEEK +G N    
Sbjct: 371  YNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDIG 430

Query: 1472 SEDPNIVPFXXXXXXXXXXXXXXXETS--SQTRSASQGRGKAKG--WRGPRGNNRSVGGS 1305
            SE+P+IVPF               E S         QGRG+ +G  W       R     
Sbjct: 431  SENPDIVPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRGARPF 490

Query: 1304 KGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
             GM G+P GM+  DG     +G  + DGF MPDIF   M  RGF  +G   PRF      
Sbjct: 491  HGMQGFPPGMMGPDGLS---YGPVTPDGFPMPDIFG--MTPRGFGPYGPT-PRFSG---- 540

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
                 D  G    M+F+ RP      PAAM P         +G    M  GR  FM G G
Sbjct: 541  -----DFMGPPTAMMFRGRPSQ----PAAMFPP--------SGFGMMMGQGRGPFMGGMG 583

Query: 947  SLGRN----NRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQA 780
              G N     RP G+                      +    ND+           + Q+
Sbjct: 584  VAGANPARPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRGLTNDRYIVGMDQNKGVEIQS 643

Query: 779  SGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRRRE 600
            SG      R+ E+Q     +      YG  + T  N+ESESEDEAPRRSRHGEGKK+RR 
Sbjct: 644  SG------RDEEMQYKQGSKAYSDEQYGTGT-TFRNEESESEDEAPRRSRHGEGKKKRRG 696

Query: 599  WDGD 588
             +GD
Sbjct: 697  SEGD 700


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  521 bits (1343), Expect = e-145
 Identities = 312/658 (47%), Positives = 381/658 (57%), Gaps = 8/658 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DKARMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 68   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIK 127

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFP-TANGNNNRYQQRYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ ++    N +N  +QQR   YN
Sbjct: 128  ECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGASYN 187

Query: 2195 KEDGQRKSSTAGVSQRSRGPLGED-SXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNE 2019
            ++  ++     G +  ++G  G                        Q  + N  NG  N+
Sbjct: 188  QQ-AEKPLLPQGNNSTNQGVTGNPLPAELGNAQPQQQVQQSQQQVNQSQMQNVANGQPNQ 246

Query: 2018 PSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILV 1839
             +    A+PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL+
Sbjct: 247  AN--RTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 304

Query: 1838 FSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLR 1659
            FSVN TRHFQGCA+MTSKIGG+V G  WK+A+GT+HYGRNF +KWLKLCELSFHKT HLR
Sbjct: 305  FSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 364

Query: 1658 NPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSA 1479
            NP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA++ AAE+KREEEK +G N  
Sbjct: 365  NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPD 424

Query: 1478 HESEDPNIVPFXXXXXXXXXXXXXXXETSSQ-TRSASQGRGKAKG--WRGPRGNNRSVGG 1308
            +  E+P+IVPF               E+       A QGRG+ +G  W       R    
Sbjct: 425  NGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPLGRGARP 484

Query: 1307 SKGMGYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
              GM     ++ GDG     +G    DGF MPD+F    +G     F   GPRF      
Sbjct: 485  MPGMQGFNPVMMGDGLS---YGPVGPDGFGMPDLFGVGPRG-----FAPYGPRFSG---- 532

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
                 D  G    M+F+ RP    MFP               G    ++ GR  FM G G
Sbjct: 533  -----DFGGPPAAMMFRGRPSQPGMFPG-------------GGFGMMLNPGRGPFMGGIG 574

Query: 947  SLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQASG-- 774
             +G  N P+G                      P+N+    K  DQR +  N  R  SG  
Sbjct: 575  -VGGANPPRG------GRPVNMPPMFPPPPPLPQNANRAAK-RDQRTADRN-DRFGSGSE 625

Query: 773  EGLEADREPEIQGPAKHRQ-QGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRRR 603
            +G   D   +  GP    Q Q GY    + +    D+SESEDEAPRRSRHGEGKK+ +
Sbjct: 626  QGKSQDMLSQSGGPDDDPQYQQGYKGNQDDHP---DDSESEDEAPRRSRHGEGKKKHK 680


>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
            gi|550349048|gb|EEE85138.2| zinc finger family protein
            [Populus trichocarpa]
          Length = 669

 Score =  520 bits (1339), Expect = e-144
 Identities = 321/681 (47%), Positives = 389/681 (57%), Gaps = 22/681 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 68   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 127

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANG--NNNRYQQRYHPY 2199
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+  + NG  +N  +QQR   +
Sbjct: 128  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQL-NSYNGVTSNKNFQQRNAGF 186

Query: 2198 NKEDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNE 2019
            +++    KS    +      P G +S                     P L N ++    +
Sbjct: 187  SQQI--EKSPNTIIK-----PSGTESANVQQQQQQQQQTQT------PHLTNGQHQQPQQ 233

Query: 2018 PS-VPSAASPLPQGNSR-----------YFIVKSSNKENLELSVQRGIWATHRNNEGKLN 1875
            P+ +   A+PLPQG S            YFIVKS N+ENLELSVQ+G+WAT R+NE KLN
Sbjct: 234  PNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSVQQGVWATQRSNEIKLN 293

Query: 1874 EAFDSCDNVILVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKL 1695
            EA DS DNVIL+FSVN TRHFQGCA+M SKIG +VGG  WK+A+GT+HYGRNF +KWLKL
Sbjct: 294  EALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAHGTAHYGRNFSVKWLKL 353

Query: 1694 CELSFHKTYHLRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETK 1515
            CELSFHKT HLRNP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMAV+ AAE K
Sbjct: 354  CELSFHKTRHLRNPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSLAAEAK 413

Query: 1514 REEEKGQGTNSAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRS-ASQGRGKAKGWRG 1338
            REEEK +G N     E+P+IVPF               E+  Q    A+QGRG+ +G   
Sbjct: 414  REEEKEKGVNPDSGGENPDIVPFEDNEEEEEEESEEEEESFGQPLGPAAQGRGRGRGMMW 473

Query: 1337 PRGNNRSVGGS--KGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHF 1167
            P  N  + G     G+ G+P  M+  DGF    +G  + D F MPD+F    +G     F
Sbjct: 474  PSHNPMARGARPIPGIRGFPPMMMGADGFS---YGAVTPDSFGMPDLFGVASRG-----F 525

Query: 1166 GQAGPRFGQPQAMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPY 987
               GPRF           D +G A GM+F  RP      P A+ PAG        G    
Sbjct: 526  PPYGPRFSG---------DFTGAASGMMFPGRPSQ----PGAVFPAG--------GFGMM 564

Query: 986  MSMGRPNFMTG----PGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLA 819
            M  GRP F+ G    P +L R  RP GM                      +N+  + K  
Sbjct: 565  MGPGRPPFIGGMGPTPSNLLRGPRPGGM-------------FAPFPAPSSQNNSRSVK-R 610

Query: 818  DQRASGSNWQRQASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPR 639
            DQRA+ +             DR        +H Q G  N      +  NDESESEDEAPR
Sbjct: 611  DQRAAAN-------------DRND------RHNQFGAVN------SIRNDESESEDEAPR 645

Query: 638  RSRHGEGKKRRREWDGDEVEG 576
            RSRHGEGKK+RR    D   G
Sbjct: 646  RSRHGEGKKKRRGSGDDATPG 666


>ref|XP_006846022.1| hypothetical protein AMTR_s00155p00079840 [Amborella trichopoda]
            gi|548848778|gb|ERN07697.1| hypothetical protein
            AMTR_s00155p00079840 [Amborella trichopoda]
          Length = 701

 Score =  514 bits (1323), Expect = e-143
 Identities = 319/684 (46%), Positives = 385/684 (56%), Gaps = 24/684 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 59   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 118

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTAN-GNNNRYQQR----Y 2208
            ECNMYKLGFCPNGPDCRYRH         V E++++IQQ+  + N G++NR+ Q     Y
Sbjct: 119  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEIFQKIQQLSSSFNQGSSNRFFQHRNTGY 178

Query: 2207 HPYNKEDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGL 2028
             P   +  Q +  +A V+Q +                               + +  NGL
Sbjct: 179  VP-QVDKNQMQQGSAVVNQGAALKPSATVDSSGSQQQQQQIQQPQQNASPNQMQSMPNGL 237

Query: 2027 TNEPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNV 1848
             N  +  SAASPLPQG SRYFIVKS N+ENLELSVQ+GIWAT R+NE KLNEAFDS +NV
Sbjct: 238  LNPINRVSAASPLPQGQSRYFIVKSCNRENLELSVQKGIWATQRSNESKLNEAFDSSENV 297

Query: 1847 ILVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTY 1668
            +L+FS+N TRHFQGCA+MTSKIGG VGG GWK+A+GT+HYGRNF LKWLKLCELSFHKT 
Sbjct: 298  VLIFSINRTRHFQGCAKMTSKIGGYVGGGGWKYAHGTAHYGRNFSLKWLKLCELSFHKTR 357

Query: 1667 HLRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGT 1488
            HLRNP NENLPVKISRDCQELE SIG+QL SLLY EPDSELMA+A AA++KREEE+ +G 
Sbjct: 358  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAIAVAAKSKREEERAKGV 417

Query: 1487 N--SAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKGWRGPRGNNR-- 1320
            +      SE+P IVPF                      S+SQ      G RG R      
Sbjct: 418  SPGGGDGSENPEIVPF---EDNDDDEEEEEETDDDDDGSSSQPLNVGPGARGSRARPMWA 474

Query: 1319 -----SVGGSKGMGYPTGMVPGDGFGFDRFGMSSADGFVM----PDIFAAQMQGRGFSHF 1167
                 + GG + M  P G+ P     F    +   + F      PD++      RGF  +
Sbjct: 475  PQIPFARGGVRPM--PPGLRP-----FSPMMLGGPEAFTYGAGPPDVY------RGFPPY 521

Query: 1166 GQAGPRF-GQPQAMMFAP----MDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMA 1002
                PRF G   A+  AP    +D +G     +    PP  AMFP A             
Sbjct: 522  --VAPRFSGDFSALGPAPGIGYIDAAGPTGAGLMFRAPPAGAMFPGA-----------AP 568

Query: 1001 GANPYMSMGR-PNFMTGPGSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDK 825
            G    MS  R P FM G G  GR +RP  + +                    E+ GG   
Sbjct: 569  GLGMMMSSTRGPAFMGGMGIAGRPSRPGPVPFRPVLPNVNGFGRGRRDQRKTESGGG--- 625

Query: 824  LADQRASGSNWQRQASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEA 645
              +Q   G        G G   D E    GP +        YG       NDESESEDEA
Sbjct: 626  -GEQGKEGMG----PDGVGSGGD-EMRAGGPMR-------PYG-------NDESESEDEA 665

Query: 644  PRRSRHGEGKKRRREWDGDEVEGD 573
            PRRSRHGEG+K+RRE DG+    D
Sbjct: 666  PRRSRHGEGRKKRREPDGEGEASD 689


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 677

 Score =  513 bits (1320), Expect = e-142
 Identities = 311/683 (45%), Positives = 382/683 (55%), Gaps = 24/683 (3%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMP+CRFF   GECRE DCVYKH+++DIK
Sbjct: 68   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 127

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRY-QQRYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ +RIQ +  T+ G +NR+ Q R   Y+
Sbjct: 128  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEVLQRIQNL--TSYGYSNRFFQNRNTNYS 185

Query: 2195 KEDGQRK-------SSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSR 2037
             +  + +        + A  S  +  P+G+                             +
Sbjct: 186  TQADKSQIPQVPNVMNQAVKSTAAEPPIGQPHQPHQQQVQQP---------------QHQ 230

Query: 2036 NGLTNEPSVPS-----AASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNE 1872
               T   ++PS     AA PLPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNE
Sbjct: 231  GAPTQTQTLPSSQQNQAAIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 290

Query: 1871 AFDSCDNVILVFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLC 1692
            AFDS +NVILVFS+N TRHFQG A+MTS+IGGA  G  WKH +GT+HYGRNF LKWLKLC
Sbjct: 291  AFDSVENVILVFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSLKWLKLC 350

Query: 1691 ELSFHKTYHLRNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKR 1512
            ELSF KT HLRNP NENLPVKISRDCQELE S+G+QL SLLY EPDSELMAV+ AAE+KR
Sbjct: 351  ELSFQKTRHLRNPYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAVSLAAESKR 410

Query: 1511 EEEKGQGTNSAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRS---ASQGRGKAKG-- 1347
            EEE+ +G N  + +E+P+IVPF               E     ++   A+ GRG+ +G  
Sbjct: 411  EEERAKGVNPDNGNENPDIVPFEDNEEEEEEESEEEEEDEGFGQAFGPAALGRGRGRGIV 470

Query: 1346 WRGPRGNNRSVGGSKGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSH 1170
            W       R      GM G+P GM+  DGF    +G  + DGF MPD +     G G   
Sbjct: 471  WPPLVPFGRGARPFPGMRGFPPGMM-SDGFS---YGSMTPDGFPMPDPY-----GMGGRP 521

Query: 1169 FGQAGPRFGQPQAMMFAPMDGSGHAPG-MVFQTRPPHNAMFPAAMLPAGTNHQQVMAGAN 993
            FG  GPRF                 PG M+F +RPP                     G  
Sbjct: 522  FGPFGPRF-----------------PGDMMFHSRPP------------------AAGGFG 546

Query: 992  PYMSMGRPNFM--TGPGSLG--RNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDK 825
              M  GRP FM   GPG+ G  R  RP G+                           N +
Sbjct: 547  MMMGPGRPPFMGGMGPGAPGPPRGGRPMGIH--------------PSFIPPTPPPSQNPR 592

Query: 824  LADQRASGSNWQRQASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEA 645
            +   + +  N +      G +  R  EI G      + G +Y     +  NDESESEDEA
Sbjct: 593  VKKDQRAPFNERNDRFSSGPDQGRGQEIAGSVGGPAE-GVHYPQTENSFRNDESESEDEA 651

Query: 644  PRRSRHGEGKKRRREWDGDEVEG 576
            PRRSRHG+GKK++   DGD   G
Sbjct: 652  PRRSRHGDGKKKKNSMDGDATTG 674


>ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
            thaliana] gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            CPSF30; AltName: Full=Zinc finger CCCH domain-containing
            protein 11; Short=AtC3H11 gi|160338218|gb|ABX26048.1|
            cleavage and polyadenylation specificity factor-YT521B
            [Arabidopsis thaliana] gi|332193100|gb|AEE31221.1|
            cleavage and polyadenylation specificity factor CPSF30
            [Arabidopsis thaliana]
          Length = 631

 Score =  509 bits (1312), Expect = e-141
 Identities = 308/656 (46%), Positives = 371/656 (56%), Gaps = 7/656 (1%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLRGLCMKGD CG+LHQ DKARMPICRFF   GECRE DCVYKH+++DIK
Sbjct: 59   RSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHTNEDIK 118

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQR-YHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+     G N  YQ R   P  
Sbjct: 119  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYGTNRLYQARNVAPQL 178

Query: 2195 KEDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNEP 2016
            ++  Q +    G  Q S G L +                         L+ +    TN  
Sbjct: 179  QDRPQGQVPMQGQPQES-GNLQQQQQQQPQQSQHQVSQT---------LIPNPADQTNRT 228

Query: 2015 SVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILVF 1836
            S      PLPQG +RYF+VKS+N+EN ELSVQ+G+WAT R+NE KLNEAFDS +NVIL+F
Sbjct: 229  S-----HPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 283

Query: 1835 SVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLRN 1656
            SVN TRHFQGCA+MTS+IGG +GG  WKH +GT+ YGRNF +KWLKLCELSFHKT +LRN
Sbjct: 284  SVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLRN 343

Query: 1655 PMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSAH 1476
            P NENLPVKISRDCQELE S+G+QL SLLY EPDSELMA++ AAE KREEEK +G N   
Sbjct: 344  PYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEKAKGVNPES 403

Query: 1475 ESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKG--WRGPRGNNRSVGGSK 1302
             +E+P+IVPF               E  S      QGRG+ +G  W       R +    
Sbjct: 404  RAENPDIVPFEDNEEEEEEEDESEEEEESMA-GGPQGRGRGRGIMWPPQMPLGRGIRPMP 462

Query: 1301 GMG-YPTGMV-PGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQAM 1128
            GMG +P G++ PGD F +   G +      MPD F     G G   FG  GPRFG     
Sbjct: 463  GMGGFPLGVMGPGDAFPYGPGGYNG-----MPDPF-----GMGPRPFGPYGPRFGG---- 508

Query: 1127 MFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGPG 948
                 D  G  PGM+F  RPP                QQ   G    M  GR   M G G
Sbjct: 509  -----DFRGPVPGMMFPGRPP----------------QQFPHGGYGMMGGGRGPHMGGMG 547

Query: 947  SLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQASGEG 768
            +  R  RP  M Y                       G +++   +R+     +R  SG+ 
Sbjct: 548  NAPRGGRP--MYYPPATSSA--------------RPGPSNRKTPERSD----ERGVSGDQ 587

Query: 767  LEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESES--EDEAPRRSRHGEGKKRR 606
               D   +++          +  GN+     N+ESES  EDEAPRRSRHGEGKKRR
Sbjct: 588  QNQDASHDMEQ---------FEVGNS---LRNEESESEDEDEAPRRSRHGEGKKRR 631


>ref|XP_001753463.1| predicted protein [Physcomitrella patens] gi|162695342|gb|EDQ81686.1|
            predicted protein [Physcomitrella patens]
          Length = 981

 Score =  509 bits (1312), Expect = e-141
 Identities = 316/733 (43%), Positives = 387/733 (52%), Gaps = 77/733 (10%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            +NYRQTVCRHWLRGLCMKGD CG+LHQ DKARMP+CRFFAK GECREPDC+YKH+++DIK
Sbjct: 56   KNYRQTVCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFAKFGECREPDCIYKHTNEDIK 115

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMF--PTANGNNNRYQQRYHPY 2199
            ECNMYKLGFCPNGPDCRYRH         V +  ++IQ     P  NG    + +     
Sbjct: 116  ECNMYKLGFCPNGPDCRYRHQKLPGPPPSVDQNLQKIQHRVYAPNTNGTTTHHGKHTPAR 175

Query: 2198 NKEDGQRKS-STAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTN 2022
            N E GQ    +TA  +Q  R                            P      NG   
Sbjct: 176  NSEGGQTGGRATAEEAQPPRSS---------------RLPAQLVAPQLPPASGMANGPIP 220

Query: 2021 EPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVIL 1842
              S PS A+PLP G  RYFIVKSSN+ENLELSV+RG+WATHRNNE KLN+AFDSC++VI 
Sbjct: 221  PTSFPSIAAPLPLGYCRYFIVKSSNRENLELSVERGLWATHRNNEAKLNDAFDSCEHVIF 280

Query: 1841 VFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHL 1662
            +FSVN TRHFQGCARM SKIGG  GG  WK+A+GT++YGRNFRLKWLKLCELSF+KT HL
Sbjct: 281  IFSVNETRHFQGCARMMSKIGGVAGGGAWKYAHGTANYGRNFRLKWLKLCELSFYKTRHL 340

Query: 1661 RNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELM----------AVACAAETKR 1512
            RN  NEN+PVKISRDCQELE S+G+QL  LLY+EPDS+LM           +A  +E KR
Sbjct: 341  RNSYNENMPVKISRDCQELEPSVGEQLALLLYQEPDSDLMVLHLKYVLTQTLAKESEEKR 400

Query: 1511 EEEKGQGTNSAHESEDPNIVPFXXXXXXXXXXXXXXXETSSQT-----------RSASQG 1365
            E+E+ +G     +  D  I+PF               + S+             R    G
Sbjct: 401  EDERARGAQEPEQEAD--IIPFEDNDEDELEDDDSEEDDSNSQSTSPANAGPGGRGRGPG 458

Query: 1364 RGKAKGWRGP---------RGNNRSVGGSKGMGYP-TGMVPGDGF--GFDRFGMSSADGF 1221
             G+ +G  GP         RG    + G  G G P    + G+GF  G+D +GM   +GF
Sbjct: 459  IGRGRGMWGPQGPGFDGMGRGGRGMMNGPGGRGLPFHPEMGGEGFGMGYDGYGMGPGEGF 518

Query: 1220 VMP-DIFAAQMQG-----------------------------RGFSHFGQ---AGPRFGQ 1140
            + P D F    +G                             RGF  FG     GP FG 
Sbjct: 519  MGPRDGFMGPGEGFMGPGGGFMGPGGGFMGPGDHFGGLPGPARGFPPFGHPGGPGPNFGG 578

Query: 1139 PQAMMFAPMDGSGHAPGMVFQTR-PPHNAMFPAAMLPAGTNHQQVMAGANPYMSM-GR-P 969
            P+   F  MDG G    M F  R PP N M      P        M G  P +   GR P
Sbjct: 579  PEFPNFGHMDGPG---PMGFPGRPPPPNGMMMGPNGPGMMGLPHSMMGEGPMLGPDGRPP 635

Query: 968  NFMTGPGS--LGRNNRPKG---MQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRAS 804
             F+ GPG   +G    P+G   M +                     + GG++K       
Sbjct: 636  PFINGPGGPPMGGRGPPRGAMNMPFRPPFAGRGGRGPGEQPKRRRGDRGGHNK------G 689

Query: 803  GSNWQRQASGEGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHG 624
            G+   +  S      + E   Q  A  RQQ     G ++  A+ ++SESEDEAPRRSRHG
Sbjct: 690  GAGGNKGRSNPSASTNEESS-QADAGQRQQ--LPIGGSASYADEEDSESEDEAPRRSRHG 746

Query: 623  EGKKRRREWDGDE 585
            + KKRR+E +G E
Sbjct: 747  QAKKRRKELEGGE 759


>ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
            lyrata] gi|297339460|gb|EFH69877.1| hypothetical protein
            ARALYDRAFT_890588 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  507 bits (1306), Expect = e-141
 Identities = 304/655 (46%), Positives = 365/655 (55%), Gaps = 6/655 (0%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLRGLCMKGD CG+LHQ DKARMPICRFF   GECRE DCVYKH+++DIK
Sbjct: 59   RSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDIK 118

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQR-YHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQQ+     G N  YQ R   P  
Sbjct: 119  ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNYGPNRFYQPRNVAPQL 178

Query: 2195 KEDGQRKSSTAGVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTNEP 2016
            ++  Q +  T G  Q + G L +                            S+  + N  
Sbjct: 179  QDKPQGQVLTQGQPQEA-GNLQQQQQQQPQQSQHQV---------------SQTQIPNPA 222

Query: 2015 SVPSAAS-PLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVILV 1839
               +  S PLPQG +RYF+VKS N+EN ELSVQ+G+WAT R+NE KLNEAFDS +NVIL+
Sbjct: 223  DQTNRTSHPLPQGVNRYFVVKSCNRENFELSVQQGVWATQRSNESKLNEAFDSVENVILI 282

Query: 1838 FSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHLR 1659
            FSVN TRHFQGCA+MTS+IG  +GG  WKH +GT+ YGRNF +KWLKLCELSFHKT +LR
Sbjct: 283  FSVNRTRHFQGCAKMTSRIGSYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLR 342

Query: 1658 NPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNSA 1479
            NP NENLPVKISRDCQELE S+G+QL SLLY EPDS+LMA++ AAE KREEEK +G N  
Sbjct: 343  NPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAISIAAEAKREEEKAKGVNPE 402

Query: 1478 HESEDPNIVPFXXXXXXXXXXXXXXXETSSQTRSASQGRGKAKG--WRGPRGNNRSVGGS 1305
              +E+P+IVPF               E  S      QGRG+ +G  W       R +   
Sbjct: 403  SRAENPDIVPFEDNEEEEEEEDESEEEEESMA-GGPQGRGRGRGMMWPPQMPLGRGIRPM 461

Query: 1304 KGMG-YPTGMV-PGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRFGQPQA 1131
             GMG +P G++ PGD F +   G +      MPD F     G G   FG  GPRFG    
Sbjct: 462  PGMGGFPLGVMGPGDAFPYGPGGYNG-----MPDPF-----GMGPRPFGPYGPRFGG--- 508

Query: 1130 MMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPNFMTGP 951
                  D  G  PGM+F  RPP                QQ   G    M  GR   M G 
Sbjct: 509  ------DFRGPVPGMMFPGRPP----------------QQFPHGGYGMMGGGRGPHMGGM 546

Query: 950  GSLGRNNRPKGMQYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRASGSNWQRQASGE 771
            G+  R  RP  M Y                      +    + +D+R  G++ Q Q +  
Sbjct: 547  GNAPRGGRP--MYYPPATSSARPGP----------TNRKTPERSDERGVGADQQNQDTSH 594

Query: 770  GLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRHGEGKKRR 606
             +E                  +  GN S      ESE EDEAPRRSRHGEGKKRR
Sbjct: 595  DMEQ-----------------FEVGN-SLRNEESESEDEDEAPRRSRHGEGKKRR 631


>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 692

 Score =  504 bits (1299), Expect = e-140
 Identities = 302/680 (44%), Positives = 376/680 (55%), Gaps = 18/680 (2%)
 Frame = -1

Query: 2552 RNYRQTVCRHWLRGLCMKGDFCGYLHQLDKARMPICRFFAKSGECREPDCVYKHSHDDIK 2373
            R++RQTVCRHWLR LCMKGD CG+LHQ DK+RMPICRFF   GECRE DCVYKH+ +DIK
Sbjct: 67   RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTIEDIK 126

Query: 2372 ECNMYKLGFCPNGPDCRYRHXXXXXXXXXVAEMYERIQQMFPTANGNNNRYQQ-RYHPYN 2196
            ECNMYKLGFCPNGPDCRYRH         V E+ ++IQ +     G +NR+ Q R   Y+
Sbjct: 127  ECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASYNYGYSNRFNQNRNANYS 186

Query: 2195 KEDGQRKSSTA--GVSQRSRGPLGEDSXXXXXXXXXXXXXXXXXXXXQPFLLNSRNGLTN 2022
             +  + ++S A  G+S   +    E                          ++  NG  N
Sbjct: 187  TQSDKSQASQAQNGMSLAVKSTATETPIIQQHQPNQQVQPPQLQGGPTQAQIHP-NGQQN 245

Query: 2021 EPSVPSAASPLPQGNSRYFIVKSSNKENLELSVQRGIWATHRNNEGKLNEAFDSCDNVIL 1842
            +      A  LPQG SRYFIVKS N+ENLELSVQ+G+WAT R+NE KLNEAFDS +NVIL
Sbjct: 246  QAD--RTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVIL 303

Query: 1841 VFSVNGTRHFQGCARMTSKIGGAVGGAGWKHANGTSHYGRNFRLKWLKLCELSFHKTYHL 1662
            +FSVN TRHFQGC +MTS+IGGA  G  WKH +GT+HYGRNF +KWLKLCELSF KT+HL
Sbjct: 304  IFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSVKWLKLCELSFQKTHHL 363

Query: 1661 RNPMNENLPVKISRDCQELEQSIGDQLVSLLYREPDSELMAVACAAETKREEEKGQGTNS 1482
            RNP NENLPVKISRDCQELE S+G+QL SLLY EPDSELMA++ AAE+KR+EEK +G N 
Sbjct: 364  RNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEKAKGVNP 423

Query: 1481 AHESEDPNIVPFXXXXXXXXXXXXXXXETSSQT-------RSASQGRGKAKGWRGPRGNN 1323
             +  ++P+IVPF               E   ++        +  +GRG+   W       
Sbjct: 424  DNGKDNPDIVPFEDNEEEEEEEEEEESEDEDESFDQGFGPAALGRGRGRGIAWPPIMPFG 483

Query: 1322 RSVGGSKGM-GYPTGMVPGDGFGFDRFGMSSADGFVMPDIFAAQMQGRGFSHFGQAGPRF 1146
                   GM G+P GM+ GDGF    +G  + +GF MPD F     G G   FG  GP F
Sbjct: 484  HGPRPPPGMRGFPPGMM-GDGFS---YGAMTPEGFPMPDHF-----GMGPRPFGPYGPPF 534

Query: 1145 GQPQAMMFAPMDGSGHAPGMVFQTRPPHNAMFPAAMLPAGTNHQQVMAGANPYMSMGRPN 966
                            +  ++F  RPP                     G    M  GRP 
Sbjct: 535  ----------------SSDLMFHGRPP-------------------AGGFGMMMGPGRPP 559

Query: 965  FM--TGPGSLG--RNNRPKGM--QYXXXXXXXXXXXXXXXXXXXPENSGGNDKLADQRAS 804
            FM   GPG+ G  R  R  GM   +                      S  ND+ +  +  
Sbjct: 560  FMGGMGPGATGPPRAGRAVGMHPSFVPPSSQPSQYPYKAKREQRAPVSDRNDRFSSDQGK 619

Query: 803  GSNWQRQASG-EGLEADREPEIQGPAKHRQQGGYNYGNNSYTANNDESESEDEAPRRSRH 627
            G        G +G+         G ++H  Q  +  GN+     N+ESESEDEAPRRSRH
Sbjct: 620  GQEMMGSVGGPDGVHMQ-----IGKSEHDNQ--FGAGNSQ---KNEESESEDEAPRRSRH 669

Query: 626  GEGKKRRREWDGDEVEGDSD 567
            G+GKK+RR+ D D   G  +
Sbjct: 670  GDGKKKRRDVDEDAATGSEN 689