BLASTX nr result
ID: Ephedra25_contig00013223
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00013223
(542 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 180 2e-43
emb|CBI34367.3| unnamed protein product [Vitis vinifera] 177 1e-42
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 177 1e-42
gb|EXB37318.1| DNA repair helicase [Morus notabilis] 177 1e-42
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 177 1e-42
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 176 2e-42
ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 176 3e-42
ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [So... 176 3e-42
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr... 176 3e-42
ref|XP_004308733.1| PREDICTED: DNA repair helicase XPB2-like [Fr... 176 3e-42
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp.... 176 3e-42
ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Or... 176 4e-42
ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, par... 176 4e-42
gb|EOY24805.1| Xeroderma pigmentosum complementation group B 2 i... 176 4e-42
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i... 176 4e-42
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i... 176 4e-42
dbj|BAB08508.1| DNA excision repair cross-complementing protein ... 175 5e-42
ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]... 175 5e-42
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 175 5e-42
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 175 5e-42
>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
vesca]
Length = 768
Score = 180 bits (456), Expect = 2e-43
Identities = 97/167 (58%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 526 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDI 585
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + M G A FYSLVS DT EM
Sbjct: 586 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMY 645
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + R + Q QLL + L
Sbjct: 646 YSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYHRLDEQLQLLSKVL 692
>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
Length = 850
Score = 177 bits (450), Expect = 1e-42
Identities = 98/168 (58%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 607 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDI 666
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEM 348
PEA V+IQISS SRRQEAQRLGRILR K R Q L+GG A FYSLVS DT EM
Sbjct: 667 PEANVIIQISSHAGSRRQEAQRLGRILRAKGR-LQDRLAGGKEEYNAFFYSLVSTDTQEM 725
Query: 349 LYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + R + Q LL + L
Sbjct: 726 YYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLALLGKVL 773
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 177 bits (450), Expect = 1e-42
Identities = 98/168 (58%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 528 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDI 587
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEM 348
PEA V+IQISS SRRQEAQRLGRILR K R Q L+GG A FYSLVS DT EM
Sbjct: 588 PEANVIIQISSHAGSRRQEAQRLGRILRAKGR-LQDRLAGGKEEYNAFFYSLVSTDTQEM 646
Query: 349 LYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + R + Q LL + L
Sbjct: 647 YYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLALLGKVL 694
>gb|EXB37318.1| DNA repair helicase [Morus notabilis]
Length = 787
Score = 177 bits (449), Expect = 1e-42
Identities = 95/167 (56%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 547 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTSRDVNTIFLSKVGDNSIDI 606
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + + M G A FYSLVS DT EM
Sbjct: 607 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMY 666
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ +L + R E Q LL + L
Sbjct: 667 YSTKRQQFLIDQGYSFKVITSLPPPDSEAELSYHRLEEQLILLSKVL 713
>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
Length = 768
Score = 177 bits (449), Expect = 1e-42
Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T + T+FLSKVGD SID+
Sbjct: 530 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDI 589
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K +++ M G A FYSLVS DT EM
Sbjct: 590 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMY 649
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PP + +L + R + Q QLL + L
Sbjct: 650 YSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDEQLQLLGKVL 696
>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 768
Score = 176 bits (447), Expect = 2e-42
Identities = 94/167 (56%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T + T+FLSKVGD SID+
Sbjct: 530 IIVFADNLFALVEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDI 589
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K +++ M G A FYSLVS DT EM
Sbjct: 590 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMY 649
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PP + +L + R + Q QLL + L
Sbjct: 650 YSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDDQLQLLGKVL 696
>ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like [Citrus
sinensis]
Length = 778
Score = 176 bits (446), Expect = 3e-42
Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+ T+FLSKVGD SID+
Sbjct: 537 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCSRDVNTIFLSKVGDNSIDI 596
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 597 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMF 656
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + R + Q LL + L
Sbjct: 657 YSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYHRLDEQLALLGKVL 703
>ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 728
Score = 176 bits (446), Expect = 3e-42
Identities = 97/170 (57%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVFSDNLFAL + M L KPMI G TSH ER+ +L+ FRT + T+FLSKVGD SID+
Sbjct: 481 IIVFSDNLFALTEYSMRLRKPMIYGCTSHAERMKILEAFRTNPEVNTIFLSKVGDNSIDI 540
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGGT------AIFYSLVSQDTA 342
PEA V+IQISS SRRQEAQRLGRILR K + L GG+ A FYSLVS DT
Sbjct: 541 PEANVIIQISSHAGSRRQEAQRLGRILRAK----RARLQGGSKTEEYDAFFYSLVSTDTQ 596
Query: 343 EMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
EM Y+TKRQ+FL++QGY+F +TN PPP+ +L + Q +LL L
Sbjct: 597 EMYYSTKRQQFLIDQGYSFKVITNLPPPDSGPELSYYHVGEQLELLGRVL 646
>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
gi|557106496|gb|ESQ46811.1| hypothetical protein
EUTSA_v10027651mg [Eutrema salsugineum]
Length = 769
Score = 176 bits (446), Expect = 3e-42
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 528 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDLNTVFLSKVGDNSIDI 587
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 588 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 647
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + L
Sbjct: 648 YSTKRQQFLIDQGYSFKVITSLPPPDAGASLSYHSQEEQLSLLAKVL 694
>ref|XP_004308733.1| PREDICTED: DNA repair helicase XPB2-like [Fragaria vesca subsp.
vesca]
Length = 821
Score = 176 bits (446), Expect = 3e-42
Identities = 97/168 (57%), Positives = 117/168 (69%), Gaps = 4/168 (2%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 574 IIVFADNLFALTEYAMKLRKPMIYGATSHAERTKILQAFKTSRDVNTIFLSKVGDNSIDI 633
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEM 348
PEA V+IQISS SRRQEAQRLGRILR K R E L+GG A FYSLVS DT EM
Sbjct: 634 PEANVIIQISSHAGSRRQEAQRLGRILRAKGRPED-RLAGGKEEYNAFFYSLVSTDTQEM 692
Query: 349 LYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
++TKRQ+FL++QGY+F +T+ PPPE +L + R Q LL + L
Sbjct: 693 YFSTKRQRFLIDQGYSFKVITSLPPPESGAELSYHRLGDQLALLSKVL 740
>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316475|gb|EFH46898.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 779
Score = 176 bits (446), Expect = 3e-42
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 539 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDI 598
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 599 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 658
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + L
Sbjct: 659 YSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVL 705
>ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Oryza brachyantha]
Length = 918
Score = 176 bits (445), Expect = 4e-42
Identities = 94/167 (56%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL M L KPMI G TSH ER +L +F+ T+FLSKVGD SID+
Sbjct: 680 IIVFADNLFALTSYAMKLRKPMIYGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDI 739
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K +++ M G A FYSLVS DT EM
Sbjct: 740 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMY 799
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPPE +L + E Q +LL ++L
Sbjct: 800 YSTKRQQFLIDQGYSFKVITSLPPPEELPNLKYYTLEEQLELLAQSL 846
>ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, partial [Citrus
clementina] gi|557541763|gb|ESR52741.1| hypothetical
protein CICLE_v100190882mg, partial [Citrus clementina]
Length = 269
Score = 176 bits (445), Expect = 4e-42
Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+ T+FLSKVGD SID+
Sbjct: 28 IIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDI 87
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 88 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMF 147
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + R + Q LL + L
Sbjct: 148 YSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYHRLDEQLALLGKVL 194
>gb|EOY24805.1| Xeroderma pigmentosum complementation group B 2 isoform 4, partial
[Theobroma cacao]
Length = 641
Score = 176 bits (445), Expect = 4e-42
Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 439 IIVFADNLFALTEYAMKLRKPMIYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDI 498
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 499 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 558
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + + Q LL + L
Sbjct: 559 YSTKRQQFLIDQGYSFKVITSLPPPDAGADLSYYHLDEQLALLGKVL 605
>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao]
Length = 742
Score = 176 bits (445), Expect = 4e-42
Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 549 IIVFADNLFALTEYAMKLRKPMIYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDI 608
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 609 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 668
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + + Q LL + L
Sbjct: 669 YSTKRQQFLIDQGYSFKVITSLPPPDAGADLSYYHLDEQLALLGKVL 715
>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
cacao]
Length = 771
Score = 176 bits (445), Expect = 4e-42
Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T T+FLSKVGD SID+
Sbjct: 528 IIVFADNLFALTEYAMKLRKPMIYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDI 587
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 588 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 647
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ DL + + Q LL + L
Sbjct: 648 YSTKRQQFLIDQGYSFKVITSLPPPDAGADLSYYHLDEQLALLGKVL 694
>dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
thaliana]
Length = 754
Score = 175 bits (444), Expect = 5e-42
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 515 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDI 574
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 575 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 634
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + L
Sbjct: 635 YSTKRQQFLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVL 681
>ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA
repair helicase XPB2; AltName: Full=ERCC3 homolog 2;
AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName:
Full=XPB homolog 2 gi|11037022|gb|AAG27465.1|AF308595_1
putative DNA repair protein and transcription factor
[Arabidopsis thaliana] gi|47606402|gb|AAT36214.1|
putative DNA repair and transcription factor XBP2
[Arabidopsis thaliana] gi|332007286|gb|AED94669.1| DNA
repair helicase XPB2 [Arabidopsis thaliana]
Length = 766
Score = 175 bits (444), Expect = 5e-42
Identities = 96/167 (57%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 527 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDI 586
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 587 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 646
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + L
Sbjct: 647 YSTKRQQFLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVL 693
>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein
and transcription factor [Arabidopsis thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
[Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 175 bits (444), Expect = 5e-42
Identities = 95/167 (56%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 527 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDI 586
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 587 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 646
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + +
Sbjct: 647 YSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVM 693
>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 175 bits (444), Expect = 5e-42
Identities = 95/167 (56%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 1 IIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDL 180
IIVF+DNLFAL + M L KPMI G TSH ER +L+ F+T TVFLSKVGD SID+
Sbjct: 527 IIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDI 586
Query: 181 PEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEML 351
PEA V+IQISS SRRQEAQRLGRILR K + E M G A FYSLVS DT EM
Sbjct: 587 PEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMY 646
Query: 352 YATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEAL 492
Y+TKRQ+FL++QGY+F +T+ PPP+ L + E Q LL + +
Sbjct: 647 YSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVM 693