BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013146
         (1394 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296230.1| PREDICTED: flowering time control protein FC...    89   4e-15
ref|XP_006378547.1| hypothetical protein POPTR_0010s15770g, part...    89   6e-15
emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]                       84   2e-13
emb|CAB05395.1| FCA alpha 2 [Arabidopsis thaliana]                     84   2e-13
gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arab...    84   2e-13
ref|NP_849542.2| flowering time control protein FCA [Arabidopsis...    84   2e-13
ref|NP_849543.2| flowering time control protein FCA [Arabidopsis...    84   2e-13
emb|CAB05388.1| FCA gamma [Arabidopsis thaliana] gi|57169178|gb|...    84   2e-13
sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control prote...    84   2e-13
ref|XP_006856549.1| hypothetical protein AMTR_s00046p00168380 [A...    82   4e-13
ref|XP_003609803.1| FCA [Medicago truncatula] gi|355510858|gb|AE...    80   2e-12
ref|XP_006283195.1| hypothetical protein CARUB_v10004227mg [Caps...    80   3e-12
gb|EMJ26360.1| hypothetical protein PRUPE_ppa002369mg [Prunus pe...    80   3e-12
gb|ESW26395.1| hypothetical protein PHAVU_003G116400g [Phaseolus...    79   3e-12
gb|AAX20016.1| FCA gamma [Pisum sativum]                               79   6e-12
gb|AAT72460.1| FCA gamma protein [Lolium perenne]                      79   6e-12
gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [O...    78   8e-12
ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group] g...    78   8e-12
dbj|BAD34210.1| Flowering time control protein FCA gamma-like [O...    78   8e-12
gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [O...    78   8e-12

>ref|XP_004296230.1| PREDICTED: flowering time control protein FCA-like [Fragaria vesca
            subsp. vesca]
          Length = 774

 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 79/282 (28%), Positives = 112/282 (39%), Gaps = 10/282 (3%)
 Frame = +3

Query: 129  QQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPN 308
            QQ+   + P   +  +P   ++  P   PP L        P+ H    + + QP + P  
Sbjct: 395  QQSLNQSIPHMGQQISPLQKHNQSPQHLPPSLHQHPQTPSPYAHTQTARQVGQPQLPPAG 454

Query: 309  ---IHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVG--AIHCSTTTDWTEHS 473
                +                IS      NA S     T   +   +   S T      S
Sbjct: 455  QTPFNQALPSQRLHGLGGQLSISQPEVQQNASSAPTLPTLLNINLKSHSMSATNQQQRPS 514

Query: 474  APDGVKYYYNRVSGISQWEKPEELVSLEEKQKQLTLQVS-----QAETQLQQQHVHPQFY 638
            AP        ++  + Q   P +L  +  +Q Q TLQ S     QA +QLQQQ    Q  
Sbjct: 515  APA-----QQQLQTLQQ--APSQLAQMLSQQTQ-TLQASFQSSQQAFSQLQQQLQQMQPS 566

Query: 639  NHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPVVPVISAPQPTAITATTVSDSRAPSL 818
            N  +             +      P+ + ANT    P  +A  P+A +A         ++
Sbjct: 567  NQGLALHQPSQSTKQQQSQWNGIVPQTV-ANTPATTP--AADVPSATSAAPAIPVTNQNI 623

Query: 819  NPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAELSAFEQQQ 944
             P  C W+EHTSP+G  YYYN  TG S+WEKPAEL+ FEQQQ
Sbjct: 624  TPTKCVWTEHTSPDGYKYYYNSATGESKWEKPAELALFEQQQ 665



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 73/300 (24%), Positives = 108/300 (36%), Gaps = 13/300 (4%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN  + P   +  N   ++H + + + Q +P+      P+ QQ       P Q      Q
Sbjct: 483  QNASSAPTLPTLLNINLKSHSMSATNQQQRPSA-----PAQQQLQTLQQAPSQLAQMLSQ 537

Query: 183  NLNSTQPN-----QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXX 347
               + Q +     QA  QLQ    Q  P  +Q +  H  QP+ +                
Sbjct: 538  QTQTLQASFQSSQQAFSQLQQQLQQMQPS-NQGLALH--QPSQSTKQ---QQSQWNGIVP 591

Query: 348  XXXXXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTD-WTEHSAPDGVKYYYNRVSGISQ 524
                   A     + PS T  + A  V   + + T   WTEH++PDG KYYYN  +G S+
Sbjct: 592  QTVANTPATTPAADVPSATSAAPAIPVTNQNITPTKCVWTEHTSPDGYKYYYNSATGESK 651

Query: 525  WEKPEELVSLEEKQKQLTLQVSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAA 704
            WEKP EL   E++Q      V Q  T    Q V  Q                  P P   
Sbjct: 652  WEKPAELALFEQQQHHQKASVQQPHTPSLPQSVSAQQQVSQTQHMHLQTHLQPQPRPNLQ 711

Query: 705  FTPKPMHANTYPVVPVISAPQPTAI-------TATTVSDSRAPSLNPVICDWSEHTSPEG 863
             + +P  ++TY    ++               T ++VSD R         +W     P G
Sbjct: 712  -SQQPSLSSTYQASGIVGQQNAQDYGYSKLPPTTSSVSDPRFQQGLQAAQEWMWKNKPTG 770


>ref|XP_006378547.1| hypothetical protein POPTR_0010s15770g, partial [Populus
           trichocarpa] gi|550329892|gb|ERP56344.1| hypothetical
           protein POPTR_0010s15770g, partial [Populus trichocarpa]
          Length = 582

 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 94/319 (29%), Positives = 123/319 (38%), Gaps = 8/319 (2%)
 Frame = +3

Query: 12  PNQPVPQSHPNQ-PNQNHVVHSASHQLQPTVQHLLHPSFQQQANYS--NTPQQWKSQAPQ 182
           PN  +P S  N  P+ N  VH   +QL P    L  P   Q  N S  + P   +  +P 
Sbjct: 174 PNAWLPMSPQNMGPSSNAGVHGFGNQLPPRSGDLAMP-LNQTVNQSLQHLPPASQQISPL 232

Query: 183 NLNSTQPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXX 362
                 P   PP LQ        +P      H+I      P                   
Sbjct: 233 QKPLQSPQHLPPSLQLHAQAASSYPQTQTSHHMIGFGRQLPASQ---------------- 276

Query: 363 ISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEE 542
                       + G S+   + A H S +    +   P  V+    +       + P +
Sbjct: 277 ---------TEIQQGISSTVALQAPH-SMSVAINQQQLPAPVQQQLLQ----PLQQSPSQ 322

Query: 543 LVSLEEKQKQLTLQVS-----QAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAF 707
           L  +  +Q Q TLQ S     QA +QLQQQ    Q  N S              +PQA  
Sbjct: 323 LAQMLSQQTQ-TLQASFQSSQQAFSQLQQQLQMMQPSNQSTLQQ----------SPQAPR 371

Query: 708 TPKPMHANTYPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRM 887
              P  A     +PV   P  +A TA  +S + AP    V C+W+EHTSPEG  YYYN +
Sbjct: 372 QQWPPQAVASTPLPVDLPPSTSAPTAGVMSQTVAP----VKCNWTEHTSPEGFKYYYNGV 427

Query: 888 TGASQWEKPAELSAFEQQQ 944
           T  S+WEKP EL  FEQQQ
Sbjct: 428 THESRWEKPEELKLFEQQQ 446



 Score = 79.0 bits (193), Expect = 5e-12
 Identities = 84/314 (26%), Positives = 120/314 (38%), Gaps = 38/314 (12%)
 Frame = +3

Query: 60   HVVHSASHQLQ---PTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQY 230
            H +  A +Q Q   P  Q LL P  Q  +  +    Q       +  S+Q  QA  QLQ 
Sbjct: 293  HSMSVAINQQQLPAPVQQQLLQPLQQSPSQLAQMLSQQTQTLQASFQSSQ--QAFSQLQQ 350

Query: 231  AFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGK 410
                  P     + Q    P    P                   +++ P   + P  T  
Sbjct: 351  QLQMMQPSNQSTLQQSPQAPRQQWP----------------PQAVASTPLPVDLPPSTSA 394

Query: 411  STAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQL----T 578
             TA  +         +WTEH++P+G KYYYN V+  S+WEKPEEL  L E+Q+QL     
Sbjct: 395  PTAGVMSQTVAPVKCNWTEHTSPEGFKYYYNGVTHESRWEKPEEL-KLFEQQQQLHQKPP 453

Query: 579  LQVSQAET-----------QLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMH 725
            +Q+ Q +T           Q QQ H+  QF +                 PQ +F+     
Sbjct: 454  VQLPQPQTNPQVLPTQQVPQTQQVHLQTQFRHQQ-------------QQPQPSFSST--- 497

Query: 726  ANTYPVVPVISAPQPTAIT----------------ATTVSDSRAPSLNPVICDWSEHTSP 857
             + Y VVP  SA   +++T                A++V+DS      PV  DW     P
Sbjct: 498  VSVYIVVPNCSAYHISSLTPYHELPEHGYTQLPAAASSVNDSTRFQGRPVAQDWMWRNKP 557

Query: 858  EG----MTYYYNRM 887
             G    +  YY+ M
Sbjct: 558  AGSDNFLFLYYSGM 571


>emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
          Length = 747

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 460  QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 516

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 517  SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 573

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 574  TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 622

Query: 537  EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
            EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 623  EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 680

Query: 702  AFTPKPMHANTYPVVPV 752
              TP   H   YP +PV
Sbjct: 681  --TPGASHNTQYPSLPV 695



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207  QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
            QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 438  QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 474

Query: 387  NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
            N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 475  NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 517

Query: 567  KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
             Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 518  LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 573

Query: 744  VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
             PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 574  TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 625

Query: 924  SAFEQQQ 944
              FE++Q
Sbjct: 626  IVFEREQ 632


>emb|CAB05395.1| FCA alpha 2 [Arabidopsis thaliana]
          Length = 505

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3   QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
           QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 218 QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 274

Query: 183 NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
           +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 275 SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 331

Query: 357 XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
             +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 332 TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 380

Query: 537 EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
           EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 381 EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 438

Query: 702 AFTPKPMHANTYPVVPV 752
             TP   H   YP +PV
Sbjct: 439 --TPGASHNTQYPSLPV 453



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207 QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
           QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 196 QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 232

Query: 387 NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
           N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 233 NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 275

Query: 567 KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
            Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 276 LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 331

Query: 744 VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
            PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 332 TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 383

Query: 924 SAFEQQQ 944
             FE++Q
Sbjct: 384 IVFEREQ 390


>gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
          Length = 672

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 385  QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 441

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 442  SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 498

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 499  TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 547

Query: 537  EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
            EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 548  EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 605

Query: 702  AFTPKPMHANTYPVVPV 752
              TP   H   YP +PV
Sbjct: 606  --TPGASHNTQYPSLPV 620



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207 QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
           QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 363 QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 399

Query: 387 NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
           N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 400 NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 442

Query: 567 KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
            Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 443 LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 498

Query: 744 VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
            PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 499 TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 550

Query: 924 SAFEQQQ 944
             FE++Q
Sbjct: 551 IVFEREQ 557


>ref|NP_849542.2| flowering time control protein FCA [Arabidopsis thaliana]
           gi|332658327|gb|AEE83727.1| flowering time control
           protein FCA [Arabidopsis thaliana]
          Length = 505

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3   QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
           QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 218 QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 274

Query: 183 NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
           +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 275 SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 331

Query: 357 XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
             +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 332 TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 380

Query: 537 EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
           EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 381 EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 438

Query: 702 AFTPKPMHANTYPVVPV 752
             TP   H   YP +PV
Sbjct: 439 --TPGASHNTQYPSLPV 453



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207 QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
           QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 196 QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 232

Query: 387 NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
           N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 233 NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 275

Query: 567 KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
            Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 276 LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 331

Query: 744 VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
            PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 332 TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 383

Query: 924 SAFEQQQ 944
             FE++Q
Sbjct: 384 IVFEREQ 390


>ref|NP_849543.2| flowering time control protein FCA [Arabidopsis thaliana]
            gi|332658325|gb|AEE83725.1| flowering time control
            protein FCA [Arabidopsis thaliana]
          Length = 747

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 460  QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 516

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 517  SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 573

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 574  TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 622

Query: 537  EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
            EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 623  EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 680

Query: 702  AFTPKPMHANTYPVVPV 752
              TP   H   YP +PV
Sbjct: 681  --TPGASHNTQYPSLPV 695



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207  QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
            QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 438  QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 474

Query: 387  NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
            N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 475  NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 517

Query: 567  KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
             Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 518  LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 573

Query: 744  VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
             PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 574  TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 625

Query: 924  SAFEQQQ 944
              FE++Q
Sbjct: 626  IVFEREQ 632


>emb|CAB05388.1| FCA gamma [Arabidopsis thaliana] gi|57169178|gb|AAW38964.1| FCA
            [Arabidopsis thaliana]
          Length = 747

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 460  QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 516

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 517  SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 573

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 574  TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 622

Query: 537  EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
            EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 623  EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 680

Query: 702  AFTPKPMHANTYPVVPV 752
              TP   H   YP +PV
Sbjct: 681  --TPGASHNTQYPSLPV 695



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207  QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
            QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 438  QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 474

Query: 387  NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
            N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 475  NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 517

Query: 567  KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
             Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 518  LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 573

Query: 744  VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
             PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 574  TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 625

Query: 924  SAFEQQQ 944
              FE++Q
Sbjct: 626  IVFEREQ 632


>sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
            gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis
            thaliana] gi|7268377|emb|CAB78670.1| FCA gamma protein
            [Arabidopsis thaliana]
          Length = 747

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 78/257 (30%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN      PQ+  N   +   V SA+ Q  P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 460  QNISRATAPQTPLNINLRPTTVSSATVQFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 516

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 517  SLQATFQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGRAGKQQWAGSAIPRVASTTGS 573

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              +S + +   A S++       VG++ C+    WTEH++PDG KYYYN ++G S+WEKP
Sbjct: 574  TPVSYVQTAAPAVSQS-------VGSVKCT----WTEHTSPDGFKYYYNGLTGESKWEKP 622

Query: 537  EELVSLE-EKQKQLTLQ----VSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQA 701
            EE++  E E+QKQ   Q    + Q++TQLQ     PQ                    P  
Sbjct: 623  EEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQPQQVQQQYQGQQLQQPFYSSLYP-- 680

Query: 702  AFTPKPMHANTYPVVPV 752
              TP   H   YP +PV
Sbjct: 681  --TPGASHNTQYPSLPV 695



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 73/247 (29%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
 Frame = +3

Query: 207  QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHY 386
            QAP Q  YA+S Q+P   Q  PQ  I  A AP                        P + 
Sbjct: 438  QAPLQNPYAYSSQLP-TSQLPPQQNISRATAPQT----------------------PLNI 474

Query: 387  NAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQ 566
            N    T  S            T  +   S    ++   +  S ++Q      L+S + + 
Sbjct: 475  NLRPTTVSSA-----------TVQFPPRSQQQPLQKMQHPPSELAQ------LLSQQTQS 517

Query: 567  KQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPV 743
             Q T Q SQ A +QLQQQ    Q  N ++P              Q A +  P  A+T   
Sbjct: 518  LQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRAG----KQQWAGSAIPRVASTTGS 573

Query: 744  VPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAEL 923
             PV            T + + + S+  V C W+EHTSP+G  YYYN +TG S+WEKP E+
Sbjct: 574  TPVSYVQ--------TAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEM 625

Query: 924  SAFEQQQ 944
              FE++Q
Sbjct: 626  IVFEREQ 632


>ref|XP_006856549.1| hypothetical protein AMTR_s00046p00168380 [Amborella trichopoda]
            gi|548860430|gb|ERN18016.1| hypothetical protein
            AMTR_s00046p00168380 [Amborella trichopoda]
          Length = 708

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 73/242 (30%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
 Frame = +3

Query: 6    NYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQN 185
            N P Q V  +   Q  Q +    A HQ       + H +   QAN  +  Q +     Q 
Sbjct: 437  NQPQQLVSSTIQPQTVQPNQQSPAQHQAL-----VQHQAIASQANILSQQQAFSHL--QQ 489

Query: 186  LNSTQPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXI 365
            L  +Q  Q   Q Q   S     P Q +PQ      +AP N+                 I
Sbjct: 490  LQQSQLQQQTSQSQKLQSYYQVMPAQLVPQSP-WTGVAPQNM--VSTPAVATAAVAPSAI 546

Query: 366  SAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEEL 545
            SA+P+    P  T  S           TT +WTEH++P+G KYYYN V+G+S+WEKPEE 
Sbjct: 547  SAVPT---VPVSTQSSAVL-------VTTCNWTEHTSPEGYKYYYNSVTGVSKWEKPEEF 596

Query: 546  VSLEEKQKQLTLQV-SQAETQLQQ-----QHVHP--QFYNHSIPXXXXXXXXXXIPNPQA 701
             + E++Q+ ++ Q+ +Q +TQ+Q      Q V P  Q    + P           PNP A
Sbjct: 597  AAFEQQQQTVSQQLHAQPQTQVQSSLQPTQQVSPANQLQPQNQPRQQQQQLPQQQPNPSA 656

Query: 702  AF 707
             +
Sbjct: 657  PY 658



 Score = 74.7 bits (182), Expect = 9e-11
 Identities = 46/128 (35%), Positives = 58/128 (45%)
 Frame = +3

Query: 561 KQKQLTLQVSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYP 740
           +Q QL  Q SQ++       V P       P               A     P   +  P
Sbjct: 491 QQSQLQQQTSQSQKLQSYYQVMPAQLVPQSPWTGVAPQNMVSTPAVATAAVAPSAISAVP 550

Query: 741 VVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAE 920
            VPV  + Q +A+  TT             C+W+EHTSPEG  YYYN +TG S+WEKP E
Sbjct: 551 TVPV--STQSSAVLVTT-------------CNWTEHTSPEGYKYYYNSVTGVSKWEKPEE 595

Query: 921 LSAFEQQQ 944
            +AFEQQQ
Sbjct: 596 FAAFEQQQ 603


>ref|XP_003609803.1| FCA [Medicago truncatula] gi|355510858|gb|AES92000.1| FCA [Medicago
            truncatula]
          Length = 862

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 83/289 (28%), Positives = 114/289 (39%), Gaps = 13/289 (4%)
 Frame = +3

Query: 117  PSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMPHPHQNIPQHII---Q 287
            PS   Q N+ N PQ    Q P       P+Q P Q     SQ+ P  HQ  PQ  I   Q
Sbjct: 431  PSAMPQQNF-NQPQP---QIPPVNQQIPPSQKPIQS----SQEFPPSHQLYPQAPIPYPQ 482

Query: 288  PAMAPPNIHHXXXXXXXXXXXXXXX-----ISAIPSHYNAPSETGKSTAAGVGAIHCSTT 452
             +  P    H                    +S   S     S T   T+        +  
Sbjct: 483  TSTRPSFRQHGQPQPLPAGPQGLGINAQFSVSQPQSQQGVLSATFPQTSLDTSMQSNTAL 542

Query: 453  TDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQLTLQVS-----QAETQLQQQ 617
            T  ++   P  ++   + +  + Q   P +L  L  +Q Q TLQ S     QA +QLQQQ
Sbjct: 543  TTPSQQQIPPSMQQQQHPLQPLPQ--SPSQLAQLLSQQTQ-TLQASFHSSQQAFSQLQQQ 599

Query: 618  HVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANTYPVVPVISAPQPTAITATTVS 797
                Q  + + P              Q   T       T+   P    P  T  T++   
Sbjct: 600  LQMMQPSSQASPLQHHAEATKT--QSQWGGTVSQAATGTHVAAPAAGVPSSTPATSSVQP 657

Query: 798  DSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAELSAFEQQQ 944
             S+  +L    C+W+EH SPEG  YYYN +TG S+WEKP EL++ EQQ+
Sbjct: 658  ISQNTTLGN--CNWTEHLSPEGFKYYYNSVTGESRWEKPEELTSSEQQK 704



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 61/195 (31%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
 Frame = +3

Query: 102  QHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPP-QLQYAFSQQMPHPHQNIPQH 278
            Q  + PS QQQ +    P Q   Q+P  L      Q    Q  +  SQQ     Q   Q 
Sbjct: 547  QQQIPPSMQQQQH----PLQPLPQSPSQLAQLLSQQTQTLQASFHSSQQAFSQLQQQLQM 602

Query: 279  IIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVGAIH--CSTT 452
            +   + A P  HH                +A  +H  AP+    S+     ++      T
Sbjct: 603  MQPSSQASPLQHHAEATKTQSQWGGTVSQAATGTHVAAPAAGVPSSTPATSSVQPISQNT 662

Query: 453  T----DWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQLTLQVSQAETQ----- 605
            T    +WTEH +P+G KYYYN V+G S+WEKPEEL S E++++ L   V Q++ Q     
Sbjct: 663  TLGNCNWTEHLSPEGFKYYYNSVTGESRWEKPEELTSSEQQKQLLNQSVQQSQIQGQPSI 722

Query: 606  ------LQQQHVHPQ 632
                   Q Q V PQ
Sbjct: 723  PPTQQVAQNQQVQPQ 737


>ref|XP_006283195.1| hypothetical protein CARUB_v10004227mg [Capsella rubella]
            gi|482551900|gb|EOA16093.1| hypothetical protein
            CARUB_v10004227mg [Capsella rubella]
          Length = 740

 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 80/264 (30%), Positives = 108/264 (40%), Gaps = 14/264 (5%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQ 182
            QN  +   PQ+  N   +   V SA+    P  Q       Q+  +  +   Q  SQ  Q
Sbjct: 464  QNVTHATAPQTPLNINLRPTPVSSATDPFPPRSQQ---QPLQKMQHPPSELAQLLSQQTQ 520

Query: 183  NLNST--QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            +L +T     QA  QLQ    Q M  P+QN+P  + Q   A                   
Sbjct: 521  SLQATLQSSQQAISQLQQQV-QSMQQPNQNLP--LSQNGQAGKQ------------QWGG 565

Query: 357  XXISAIPSHYNAPSETGKSTAA-----GVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGIS 521
              I  + S   + + T   TAA      V  + C+    WTEH++PDG KYYYN V+G S
Sbjct: 566  STIPTVLSTTGSTAVTNVQTAAPAVSQSVFIVKCN----WTEHTSPDGFKYYYNGVTGES 621

Query: 522  QWEKPEELVSL-----EEKQKQLTLQVSQAETQLQ--QQHVHPQFYNHSIPXXXXXXXXX 680
            +WEKPEE+V       E+KQ Q    + Q +TQLQ  QQ   P    +            
Sbjct: 622  KWEKPEEMVVFEREQHEQKQHQQKPTIQQPQTQLQPMQQQTQPVHQQYQGQQLQQPFHSS 681

Query: 681  XIPNPQAAFTPKPMHANTYPVVPV 752
              P P A+      H   YP +PV
Sbjct: 682  LYPTPGAS------HIAQYPSLPV 699



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = +3

Query: 540 ELVSLEEKQKQLTLQVSQ-AETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPK 716
           +L+S + +  Q TLQ SQ A +QLQQQ    Q  N ++P            N QA    +
Sbjct: 513 QLLSQQTQSLQATLQSSQQAISQLQQQVQSMQQPNQNLPLSQ---------NGQAG--KQ 561

Query: 717 PMHANTYPVVPVISAPQPTAIT-ATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTG 893
               +T P V  +S    TA+T   T + + + S+  V C+W+EHTSP+G  YYYN +TG
Sbjct: 562 QWGGSTIPTV--LSTTGSTAVTNVQTAAPAVSQSVFIVKCNWTEHTSPDGFKYYYNGVTG 619

Query: 894 ASQWEKPAELSAFEQQQ 944
            S+WEKP E+  FE++Q
Sbjct: 620 ESKWEKPEEMVVFEREQ 636


>gb|EMJ26360.1| hypothetical protein PRUPE_ppa002369mg [Prunus persica]
          Length = 680

 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 52/146 (35%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
 Frame = +3

Query: 528 EKPEELVSLEEKQKQLTLQVS-----QAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPN 692
           + P +L  +  +Q Q TLQ S     QA +QLQQQ    Q  N  +             +
Sbjct: 437 QSPSQLAQMLSQQTQ-TLQASFQSSQQAFSQLQQQLQLMQPSNQGLALHQISQATKQQQS 495

Query: 693 PQAAFTPKPMHANTYPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTY 872
                 P+ + A+T    P    P  T++   T + +      P  C W+EHTSP+G  Y
Sbjct: 496 QWTGVVPQTV-ASTAAATPAADVPSATSVAPVTQTTA------PAKCIWTEHTSPDGYKY 548

Query: 873 YYNRMTGASQWEKPAELSAFEQQQGQ 950
           YYN  TG S+WEKPAE   FEQQQ Q
Sbjct: 549 YYNNATGESRWEKPAEFILFEQQQQQ 574



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 64/221 (28%), Positives = 89/221 (40%), Gaps = 23/221 (10%)
 Frame = +3

Query: 54  QNHVVHSASHQ-----LQPTVQHLLHPSFQQ---------------QANYSNTPQQWKSQ 173
           Q H V S ++Q       P  Q LL P  Q                QA++ ++ Q + SQ
Sbjct: 408 QRHSVSSTTNQQPLSSAPPVQQPLLQPLQQSPSQLAQMLSQQTQTLQASFQSSQQAF-SQ 466

Query: 174 APQNLNSTQPNQ---APPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXX 344
             Q L   QP+    A  Q+  A  QQ       +PQ +   A A P             
Sbjct: 467 LQQQLQLMQPSNQGLALHQISQATKQQQSQWTGVVPQTVASTAAATPAA----------- 515

Query: 345 XXXXXXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQ 524
                         + PS T   + A V          WTEH++PDG KYYYN  +G S+
Sbjct: 516 --------------DVPSAT---SVAPVTQTTAPAKCIWTEHTSPDGYKYYYNNATGESR 558

Query: 525 WEKPEELVSLEEKQKQLTLQVSQAETQLQQQHVHPQFYNHS 647
           WEKP E +  E++Q+Q    V QA T    Q++  Q  +H+
Sbjct: 559 WEKPAEFILFEQQQQQQKASVQQAHTPSLPQNLSAQQVSHN 599


>gb|ESW26395.1| hypothetical protein PHAVU_003G116400g [Phaseolus vulgaris]
          Length = 731

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 87/335 (25%), Positives = 128/335 (38%), Gaps = 24/335 (7%)
 Frame = +3

Query: 12   PNQPVPQSHPNQ-PNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTP-------QQWK 167
            PN   P   PN  P+ N  +H     + P    ++  +          P       Q   
Sbjct: 301  PNAWRPMHPPNMGPSTNAALHGMGPPMLPRSGEMVPTNAGGPMTGFGGPMDGRFQVQSMP 360

Query: 168  SQAPQNLNSTQPNQAPP--------QLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXX 323
            S + QN N   P Q PP        Q     SQ++P  +Q  PQ  +    A    H   
Sbjct: 361  SMSQQNFNQPMP-QIPPLNQQISPLQKNIQSSQELPPSNQLYPQAPVPYPQASLRQHGQP 419

Query: 324  XXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYN 503
                         I  +   +  P+   ++  + + A    T  D + HS          
Sbjct: 420  LLPPSAGPLQSQQIHGVSGQF--PTSQPQTQQSALSAAFPQTPLDASMHSNTALATNQQQ 477

Query: 504  RVSGISQW---EKPEELVSLEEKQKQLTLQVS-----QAETQLQQQHVHPQFYNHSIPXX 659
                ++Q    + P  L  +  +Q Q TLQ S     QA +QLQQQ    Q  + ++   
Sbjct: 478  VPPSMTQQPLQQSPSPLAQMLSQQTQ-TLQASFHSSQQAFSQLQQQLQMMQPSSQALTLQ 536

Query: 660  XXXXXXXXIPNPQAAFTPKPMHANTYPVVPVISAPQPTAITATTVSDSRAPSLNPVICDW 839
                        Q A T     A+T+   P   AP  ++  AT+   +   +     C+W
Sbjct: 537  QNAEATKK--QSQWAGTVAQTVASTHATAPAADAP--SSKLATSALQAINHNSAHAKCNW 592

Query: 840  SEHTSPEGMTYYYNRMTGASQWEKPAELSAFEQQQ 944
            +EH SPEG  YYYN +TG S+WEKP EL+ +EQQQ
Sbjct: 593  TEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQ 627



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 70/255 (27%), Positives = 103/255 (40%), Gaps = 44/255 (17%)
 Frame = +3

Query: 3    QNYPNQPVPQSHPNQ-------------PNQNHVVHSASHQL---QP-TVQHLLHPSFQQ 131
            Q YP  PVP    +              P Q+  +H  S Q    QP T Q  L  +F Q
Sbjct: 399  QLYPQAPVPYPQASLRQHGQPLLPPSAGPLQSQQIHGVSGQFPTSQPQTQQSALSAAFPQ 458

Query: 132  Q----ANYSNTPQQW-KSQAPQNLNSTQPNQAPPQLQYAFSQQMP------HPHQNIPQH 278
                 + +SNT     + Q P ++      Q+P  L    SQQ        H  Q     
Sbjct: 459  TPLDASMHSNTALATNQQQVPPSMTQQPLQQSPSPLAQMLSQQTQTLQASFHSSQQAFSQ 518

Query: 279  I------IQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPS-HYNAPSETGKSTAAGVGAI 437
            +      +QP+     +                    + S H  AP+    S+     A+
Sbjct: 519  LQQQLQMMQPSSQALTLQQNAEATKKQSQWAGTVAQTVASTHATAPAADAPSSKLATSAL 578

Query: 438  HC------STTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQLTLQVSQAE 599
                        +WTEH +P+G KYYYN V+G S+WEKPEEL   E++Q+++++Q  Q +
Sbjct: 579  QAINHNSAHAKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQQRVSVQQPQTQ 638

Query: 600  TQ---LQQQHVHPQF 635
            +Q   L  Q + PQF
Sbjct: 639  SQPSVLPAQQI-PQF 652


>gb|AAX20016.1| FCA gamma [Pisum sativum]
          Length = 743

 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 60/172 (34%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
 Frame = +3

Query: 117  PSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPP-QLQYAFSQQMPHPHQNIPQHIIQPA 293
            PS QQQ      P Q   Q+P  L      Q    Q  +  SQQ     Q   Q I   +
Sbjct: 486  PSMQQQQQQQQQPLQPLQQSPSQLAQLVSQQTQTLQASFHSSQQAFSQLQQQLQMIQPSS 545

Query: 294  MAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSE-TGKSTAA--GVGAIHCSTTT--- 455
             A    HH                +A  +H  AP+  T  STAA   V AI  +TT    
Sbjct: 546  QAMTLQHHAEATKTQSQWGGPVSHAATGAHVAAPAAGTPSSTAATSSVQAISQNTTLPKC 605

Query: 456  DWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQLTLQVSQAETQLQ 611
            +WTEH +P+G KYYYN V+G S+WEKPEEL    ++++Q +    Q++ Q Q
Sbjct: 606  NWTEHLSPEGFKYYYNSVTGESRWEKPEELTLFGQQKRQHSQSDQQSQNQSQ 657



 Score = 75.1 bits (183), Expect = 7e-11
 Identities = 82/299 (27%), Positives = 121/299 (40%), Gaps = 21/299 (7%)
 Frame = +3

Query: 117  PSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMPHPHQNIPQHII---Q 287
            PS   Q N++    Q +SQ P       P+Q P Q     SQ+ P  HQ  PQ  +   Q
Sbjct: 365  PSAMPQQNFN----QPRSQIPPVNQQIPPSQKPIQS----SQEFPPSHQLYPQAPMPYPQ 416

Query: 288  PAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTE 467
             +  P    H                  I + ++ P    + +         S  T+   
Sbjct: 417  KSTLPSLRQHGQPQPLSAGQQGL----GINAQFSVPQPQAQKSVLSATFPQTSLDTNIQS 472

Query: 468  HSA---------PDGVKYYYNRVSGISQ--WEKPEELVSLEEKQKQLTLQVS-----QAE 599
            ++A         P  ++    +     Q   + P +L  L  +Q Q TLQ S     QA 
Sbjct: 473  NTALTTPNRQQIPPSMQQQQQQQQQPLQPLQQSPSQLAQLVSQQTQ-TLQASFHSSQQAF 531

Query: 600  TQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANT--YPVVPVISAPQPT 773
            +QLQQQ    Q  + ++               Q+ +     HA T  +   P    P  T
Sbjct: 532  SQLQQQLQMIQPSSQAMTLQHHAEAT----KTQSQWGGPVSHAATGAHVAAPAAGTPSST 587

Query: 774  AITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKPAELSAFEQQQGQ 950
            A T++  + S+  +L    C+W+EH SPEG  YYYN +TG S+WEKP EL+ F QQ+ Q
Sbjct: 588  AATSSVQAISQNTTLPK--CNWTEHLSPEGFKYYYNSVTGESRWEKPEELTLFGQQKRQ 644


>gb|AAT72460.1| FCA gamma protein [Lolium perenne]
          Length = 668

 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 65/201 (32%), Positives = 89/201 (44%)
 Frame = +3

Query: 18  QPVPQSHPNQPNQNHVVHSASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNST 197
           QP+ Q  P+Q  Q  +   A+  +Q + Q      FQ Q       QQ + Q   NLN  
Sbjct: 435 QPIQQI-PSQAPQLLLQQQAA--MQSSYQSSQQAIFQLQQQLQLMQQQQQQQQQPNLNQQ 491

Query: 198 QPNQAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIP 377
           QPN    Q     S+Q   P+Q+        AM P NI+                  AIP
Sbjct: 492 QPNLNQQQ-HTQISKQQGQPNQSSTPGA-PAAMMPSNIN------------------AIP 531

Query: 378 SHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLE 557
              N+P+               S T +WTEH++P+G KYYYN ++  S+WEKPEE V  E
Sbjct: 532 QQVNSPA--------------VSLTCNWTEHTSPEGFKYYYNSITRESKWEKPEEYVLYE 577

Query: 558 EKQKQLTLQVSQAETQLQQQH 620
           ++Q+    Q  Q +  L QQH
Sbjct: 578 QQQQ----QQQQQKLILLQQH 594



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 86/318 (27%), Positives = 120/318 (37%), Gaps = 8/318 (2%)
 Frame = +3

Query: 21   PVPQSHPNQPNQNHVVHSASHQLQPTV-QHLLHPSFQQQANYSNTPQ-QWKSQAPQNLNS 194
            P  Q  P  P      H+ S QLQ    QH L P    Q    N P  Q   Q P +   
Sbjct: 345  PPLQKPPGPP------HNFSLQLQNQQGQHSLVPGLFGQ----NVPSMQLPGQLPTSQPL 394

Query: 195  TQPN------QAPPQLQYAFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXX 356
            TQ N      QAPP +Q +  Q +P   Q +P ++    M  P                 
Sbjct: 395  TQQNASAGALQAPPAIQSSPMQSVPG-QQQLPSNVAPQMMQQP----------------- 436

Query: 357  XXISAIPSHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKP 536
              I  IPS   AP    +  AA   +            S+   +     ++  + Q ++ 
Sbjct: 437  --IQQIPSQ--APQLLLQQQAAMQSSYQ----------SSQQAIFQLQQQLQLMQQQQQQ 482

Query: 537  EELVSLEEKQKQLTLQVSQAETQLQQQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPK 716
            ++  +L ++Q  L     Q  TQ+ +Q   P   N S             P   AA  P 
Sbjct: 483  QQQPNLNQQQPNLN---QQQHTQISKQQGQP---NQS-----------STPGAPAAMMPS 525

Query: 717  PMHANTYPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGA 896
             ++A             P  + +  VS         + C+W+EHTSPEG  YYYN +T  
Sbjct: 526  NINAI------------PQQVNSPAVS---------LTCNWTEHTSPEGFKYYYNSITRE 564

Query: 897  SQWEKPAELSAFEQQQGQ 950
            S+WEKP E   +EQQQ Q
Sbjct: 565  SKWEKPEEYVLYEQQQQQ 582


>gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
           Group]
          Length = 626

 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
 Frame = +3

Query: 72  SASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMP 251
           S S Q  P  QHL  PS           QQ  SQAPQ L      QA  Q  Y  SQQ  
Sbjct: 397 SNSMQAIPGQQHL--PSNVAPQMLQQPVQQMPSQAPQLLLQ---QQAALQSSYQSSQQAI 451

Query: 252 HPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVG 431
           +  Q   Q + Q   +  N                   + IPS+ N   +   S A  + 
Sbjct: 452 YQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSSNPGAPNAIIPSNINTIPQQATSPAVPL- 510

Query: 432 AIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQ------LTLQVSQ 593
                 T +WTEH++P+G KYYYN ++  S+W+KPEE V  E++Q+Q      L LQ  Q
Sbjct: 511 ------TCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYEQQQQQQQQQKLLLLQQHQ 564

Query: 594 AETQLQQQHVHPQFYNH 644
            +  +QQ    PQ   H
Sbjct: 565 QKLAMQQLQSPPQAQTH 581



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 2/252 (0%)
 Frame = +3

Query: 201 PNQAPPQLQY-AFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIP 377
           P   P QLQ     Q +  P Q I Q  +  +M P +                   +A  
Sbjct: 328 PQNFPVQLQNNQQGQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASV 387

Query: 378 SHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLE 557
           S    PS    S  A  G  H  +        AP  ++    ++   +     ++  +L+
Sbjct: 388 SAVQVPSAVSNSMQAIPGQQHLPSNV------APQMLQQPVQQMPSQAPQLLLQQQAALQ 441

Query: 558 EKQKQLTLQVSQAETQLQ-QQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANT 734
              +     + Q + QLQ  Q       NH  P            NP A     P + NT
Sbjct: 442 SSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSS---NPGAPNAIIPSNINT 498

Query: 735 YPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKP 914
            P                    + +P++ P+ C+W+EHTSPEG  YYYN +T  S+W+KP
Sbjct: 499 IP------------------QQATSPAV-PLTCNWTEHTSPEGFKYYYNSITRESKWDKP 539

Query: 915 AELSAFEQQQGQ 950
            E   +EQQQ Q
Sbjct: 540 EEYVLYEQQQQQ 551


>ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
           gi|34555646|gb|AAQ74971.1| flowering time control
           protein isoform OsFCA-3 [Oryza sativa Indica Group]
           gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa
           Japonica Group]
          Length = 637

 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
 Frame = +3

Query: 72  SASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMP 251
           S S Q  P  QHL  PS           QQ  SQAPQ L      QA  Q  Y  SQQ  
Sbjct: 397 SNSMQAIPGQQHL--PSNVAPQMLQQPVQQMPSQAPQLLLQ---QQAALQSSYQSSQQAI 451

Query: 252 HPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVG 431
           +  Q   Q + Q   +  N                   + IPS+ N   +   S A  + 
Sbjct: 452 YQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSSNPGAPNAIIPSNINTIPQQATSPAVPL- 510

Query: 432 AIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQ------LTLQVSQ 593
                 T +WTEH++P+G KYYYN ++  S+W+KPEE V  E++Q+Q      L LQ  Q
Sbjct: 511 ------TCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYEQQQQQQQQQKLLLLQQHQ 564

Query: 594 AETQLQQQHVHPQFYNH 644
            +  +QQ    PQ   H
Sbjct: 565 QKLAMQQLQSPPQAQTH 581



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 2/252 (0%)
 Frame = +3

Query: 201 PNQAPPQLQY-AFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIP 377
           P   P QLQ     Q +  P Q I Q  +  +M P +                   +A  
Sbjct: 328 PQNFPVQLQNNQLGQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASV 387

Query: 378 SHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLE 557
           S    PS    S  A  G  H  +        AP  ++    ++   +     ++  +L+
Sbjct: 388 SAVQVPSAVSNSMQAIPGQQHLPSNV------APQMLQQPVQQMPSQAPQLLLQQQAALQ 441

Query: 558 EKQKQLTLQVSQAETQLQ-QQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANT 734
              +     + Q + QLQ  Q       NH  P            NP A     P + NT
Sbjct: 442 SSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSS---NPGAPNAIIPSNINT 498

Query: 735 YPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKP 914
            P                    + +P++ P+ C+W+EHTSPEG  YYYN +T  S+W+KP
Sbjct: 499 IP------------------QQATSPAV-PLTCNWTEHTSPEGFKYYYNSITRESKWDKP 539

Query: 915 AELSAFEQQQGQ 950
            E   +EQQQ Q
Sbjct: 540 EEYVLYEQQQQQ 551


>dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
           Japonica Group]
          Length = 546

 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
 Frame = +3

Query: 72  SASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMP 251
           S S Q  P  QHL  PS           QQ  SQAPQ L      QA  Q  Y  SQQ  
Sbjct: 306 SNSMQAIPGQQHL--PSNVAPQMLQQPVQQMPSQAPQLLLQ---QQAALQSSYQSSQQAI 360

Query: 252 HPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVG 431
           +  Q   Q + Q   +  N                   + IPS+ N   +   S A  + 
Sbjct: 361 YQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSSNPGAPNAIIPSNINTIPQQATSPAVPL- 419

Query: 432 AIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQ------LTLQVSQ 593
                 T +WTEH++P+G KYYYN ++  S+W+KPEE V  E++Q+Q      L LQ  Q
Sbjct: 420 ------TCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYEQQQQQQQQQKLLLLQQHQ 473

Query: 594 AETQLQQQHVHPQFYNH 644
            +  +QQ    PQ   H
Sbjct: 474 QKLAMQQLQSPPQAQTH 490



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 2/252 (0%)
 Frame = +3

Query: 201 PNQAPPQLQY-AFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIP 377
           P   P QLQ     Q +  P Q I Q  +  +M P +                   +A  
Sbjct: 237 PQNFPVQLQNNQLGQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASV 296

Query: 378 SHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLE 557
           S    PS    S  A  G  H  +        AP  ++    ++   +     ++  +L+
Sbjct: 297 SAVQVPSAVSNSMQAIPGQQHLPSNV------APQMLQQPVQQMPSQAPQLLLQQQAALQ 350

Query: 558 EKQKQLTLQVSQAETQLQ-QQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANT 734
              +     + Q + QLQ  Q       NH  P            NP A     P + NT
Sbjct: 351 SSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSS---NPGAPNAIIPSNINT 407

Query: 735 YPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKP 914
            P                    + +P++ P+ C+W+EHTSPEG  YYYN +T  S+W+KP
Sbjct: 408 IP------------------QQATSPAV-PLTCNWTEHTSPEGFKYYYNSITRESKWDKP 448

Query: 915 AELSAFEQQQGQ 950
            E   +EQQQ Q
Sbjct: 449 EEYVLYEQQQQQ 460


>gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
            Group] gi|47496990|dbj|BAD20100.1| Flowering time control
            protein FCA gamma-like [Oryza sativa Japonica Group]
            gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza
            sativa Japonica Group] gi|58003966|gb|AAW62371.1| FCA
            [Oryza sativa Japonica Group]
          Length = 738

 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
 Frame = +3

Query: 72   SASHQLQPTVQHLLHPSFQQQANYSNTPQQWKSQAPQNLNSTQPNQAPPQLQYAFSQQMP 251
            S S Q  P  QHL  PS           QQ  SQAPQ L      QA  Q  Y  SQQ  
Sbjct: 498  SNSMQAIPGQQHL--PSNVAPQMLQQPVQQMPSQAPQLLLQ---QQAALQSSYQSSQQAI 552

Query: 252  HPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIPSHYNAPSETGKSTAAGVG 431
            +  Q   Q + Q   +  N                   + IPS+ N   +   S A  + 
Sbjct: 553  YQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSSNPGAPNAIIPSNINTIPQQATSPAVPL- 611

Query: 432  AIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLEEKQKQ------LTLQVSQ 593
                  T +WTEH++P+G KYYYN ++  S+W+KPEE V  E++Q+Q      L LQ  Q
Sbjct: 612  ------TCNWTEHTSPEGFKYYYNSITRESKWDKPEEYVLYEQQQQQQQQQKLLLLQQHQ 665

Query: 594  AETQLQQQHVHPQFYNH 644
             +  +QQ    PQ   H
Sbjct: 666  QKLAMQQLQSPPQAQTH 682



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 2/252 (0%)
 Frame = +3

Query: 201  PNQAPPQLQY-AFSQQMPHPHQNIPQHIIQPAMAPPNIHHXXXXXXXXXXXXXXXISAIP 377
            P   P QLQ     Q +  P Q I Q  +  +M P +                   +A  
Sbjct: 429  PQNFPVQLQNNQLGQPLQGPAQQIGQLQVPQSMGPGSFGQNRLSGQLPVSQPLMQQNASV 488

Query: 378  SHYNAPSETGKSTAAGVGAIHCSTTTDWTEHSAPDGVKYYYNRVSGISQWEKPEELVSLE 557
            S    PS    S  A  G  H  +        AP  ++    ++   +     ++  +L+
Sbjct: 489  SAVQVPSAVSNSMQAIPGQQHLPSNV------APQMLQQPVQQMPSQAPQLLLQQQAALQ 542

Query: 558  EKQKQLTLQVSQAETQLQ-QQHVHPQFYNHSIPXXXXXXXXXXIPNPQAAFTPKPMHANT 734
               +     + Q + QLQ  Q       NH  P            NP A     P + NT
Sbjct: 543  SSYQSSQQAIYQLQQQLQLMQQQQQSNLNHQQPTQGQPVQSS---NPGAPNAIIPSNINT 599

Query: 735  YPVVPVISAPQPTAITATTVSDSRAPSLNPVICDWSEHTSPEGMTYYYNRMTGASQWEKP 914
             P                    + +P++ P+ C+W+EHTSPEG  YYYN +T  S+W+KP
Sbjct: 600  IP------------------QQATSPAV-PLTCNWTEHTSPEGFKYYYNSITRESKWDKP 640

Query: 915  AELSAFEQQQGQ 950
             E   +EQQQ Q
Sbjct: 641  EEYVLYEQQQQQ 652