BLASTX nr result

ID: Ephedra25_contig00013104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013104
         (444 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849806.1| hypothetical protein AMTR_s00176p00053030 [A...    59   5e-07
gb|ABK24277.1| unknown [Picea sitchensis]                              56   6e-06
ref|XP_006403427.1| hypothetical protein EUTSA_v10011136mg [Eutr...    55   7e-06

>ref|XP_006849806.1| hypothetical protein AMTR_s00176p00053030 [Amborella trichopoda]
           gi|548853383|gb|ERN11387.1| hypothetical protein
           AMTR_s00176p00053030 [Amborella trichopoda]
          Length = 390

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
 Frame = +1

Query: 46  SFTQDIADKYGIPRVAFHTGGACALSLWHHMP--------PLLDESDFWERWRTNMARKV 201
           SFT+++A++ GIPRV+F T G C    +  +P        PL D +   E +       +
Sbjct: 35  SFTREVAEEIGIPRVSFWTSGGCGYWAFLQIPELIRRGYTPLKDMACLAEGYLDTTLDWI 94

Query: 202 SVMEVLRMKDMPXXXXXXXXXXXXXHHLHNQIQHAKEHAAFVFVNTWHDLEEMLLVDLDK 381
             M  + +KDMP             +++ +++QHA   +A + +NT+ DLE+ +L  + +
Sbjct: 95  PGMPNILLKDMPSFIRTTDPNFFLLNYIKDEVQHAFNASALI-LNTFDDLEKDVLNAIKE 153

Query: 382 EFSGKVISLGPLA-----LTKEKHQP 444
                + +LGPL      +TKE+ +P
Sbjct: 154 RIPCPLYTLGPLLTFSHDVTKEEVKP 179


>gb|ABK24277.1| unknown [Picea sitchensis]
          Length = 493

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
 Frame = +1

Query: 46  SFTQDIADKYGIPRVAFHTGGACALSLWHHMP--------PLLDESDFWERWRTN-MARK 198
           S TQDIA++YG+PRVAF T  AC    +  MP        PL DES     +        
Sbjct: 128 SKTQDIANQYGVPRVAFWTTSACGFMAYFSMPLLINKGYLPLKDESCLTSEYLDEPRISC 187

Query: 199 VSVMEVLRMKDMPXXXXXXXXXXXXXHHLHNQIQHAKEHAAFVFVNTWHDLEEMLLVDLD 378
           +  M  LR++D+P              +  +Q Q     AA + +NT+ +LE  +L  L 
Sbjct: 188 IPGMPQLRLRDLPSFCLVTDSSDIMFRNGISQTQGTLPAAALI-LNTFDELEGPVLEALS 246

Query: 379 KEFSGKVISLGPLALTKEKH 438
             F   V ++GPL L++  H
Sbjct: 247 VHF--PVYAIGPLLLSQSFH 264


>ref|XP_006403427.1| hypothetical protein EUTSA_v10011136mg [Eutrema salsugineum]
           gi|557104546|gb|ESQ44880.1| hypothetical protein
           EUTSA_v10011136mg [Eutrema salsugineum]
          Length = 466

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/125 (26%), Positives = 59/125 (47%)
 Frame = +1

Query: 40  WFSFTQDIADKYGIPRVAFHTGGACALSLWHHMPPLLDESDFWERWRTNMARKVSVMEVL 219
           W   T+D A++ G+ RV   TGGA +   +   P L D+  F  +  + +   V  +  L
Sbjct: 121 WGKNTEDAAEEVGVRRVVLRTGGAASFCAFAAFPLLRDKGYFRNKQGSRLDDLVIELPPL 180

Query: 220 RMKDMPXXXXXXXXXXXXXHHLHNQIQHAKEHAAFVFVNTWHDLEEMLLVDLDKEFSGKV 399
           ++KD+P             + + N +    + ++ V  NT+ DLE + L+DL+ E    +
Sbjct: 181 KVKDLP---VIETNDPEELYRIINDMVEGAKSSSGVIWNTFEDLERLSLMDLNSELQVPI 237

Query: 400 ISLGP 414
             +GP
Sbjct: 238 FPIGP 242


Top