BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012793
         (1604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25332.1| unknown [Picea sitchensis]                             113   2e-22
gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theob...    70   3e-09
gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theob...    70   3e-09
ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [A...    66   5e-08
gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis]      63   4e-07
ref|XP_004293969.1| PREDICTED: uncharacterized protein LOC101302...    63   4e-07
ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Popu...    62   9e-07

>gb|ABK25332.1| unknown [Picea sitchensis]
          Length = 432

 Score =  113 bits (283), Expect = 2e-22
 Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 34/351 (9%)
 Frame = +1

Query: 652  LSVPHIVHFAIGNASLSLQKISNSRRKFPVSALPVKESESHSQRQSRADNRNKTVRKKKS 831
            LS  H  H A+ N S   +  SN +R+ P+    VK+     + + + +   + V+    
Sbjct: 75   LSSSHAEHMALSNISFPRRMPSNFKRQSPIPISAVKKEGRRIRNRKQENTGAEKVQDNFD 134

Query: 832  LEHV--QNAGKVYXXXXXXXXXXXXXXXXXXXXXXXXXXGNHSDTENPPNSSSIEDFKAL 1005
             E+V  +     +                          G++ D     NSS  +D  AL
Sbjct: 135  SENVTGETDNVNHSKIGYRLSQRSPSTYARRSPMSSPDDGSNPDMNKSSNSSVEDDIVAL 194

Query: 1006 FWRIQEDPNV-QENLGRKLKDNSTSSINSNVKTEDASCL------PKHKEPVMN------ 1146
            F RIQ +  V +EN G   K+++ SS   ++K+ D+          K KE +        
Sbjct: 195  FRRIQAESTVSKENPGNNKKNSNISS--KSMKSADSVLRVLRQYPDKPKEEIEEETNQKI 252

Query: 1147 --------ILHKFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQ 1302
                    +  + D   K   K +   +    S    + +    ++S R     ++  + 
Sbjct: 253  SLMGGYEKMATQIDSSRKQSKKSKEIEEEPNISLMAGYEKMATKRDSSRRQSKKSESQRI 312

Query: 1303 T----------ISRPPSEFVRKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTS-SSDVKL 1449
            T          +SRP S+FV KSPIPLSAIKK VRPVPG++++++  QN  TS  S+   
Sbjct: 313  TKNMDKSEDFLLSRPTSKFVHKSPIPLSAIKKEVRPVPGIQQSDE--QNGGTSRDSEGTS 370

Query: 1450 PSSDNGSFLKHSPSSSEFQFDDLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
             S  NGS L+ S    E Q DDL +  LSEL++ AKS+GLKGYS+LKK +L
Sbjct: 371  ASVLNGSLLRDSAGLLEDQPDDLSQLNLSELKKTAKSYGLKGYSKLKKAEL 421


>gb|EOY27958.1| Rho termination factor, putative isoform 2 [Theobroma cacao]
          Length = 257

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 60/211 (28%), Positives = 97/211 (45%)
 Frame = +1

Query: 970  PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 1149
            PNSS+ ED  ALF RIQ   +  E    K K  S+S   S              E V+++
Sbjct: 88   PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 135

Query: 1150 LHKFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 1329
            L +    ++       + K G+ASR  S   + +    K+ +  + DF    + RPPS F
Sbjct: 136  LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 188

Query: 1330 VRKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 1509
            V++SP+P     +    V GL++  ++    + ++  +KL + +                
Sbjct: 189  VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 224

Query: 1510 DDLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
                K KL+EL++ AK+ G+KGYSR KK +L
Sbjct: 225  ----KLKLTELKDLAKARGIKGYSRFKKSEL 251


>gb|EOY27957.1| Rho termination factor, putative isoform 1 [Theobroma cacao]
          Length = 345

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 60/211 (28%), Positives = 97/211 (45%)
 Frame = +1

Query: 970  PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 1149
            PNSS+ ED  ALF RIQ   +  E    K K  S+S   S              E V+++
Sbjct: 176  PNSSNQEDIIALFRRIQSSISKGETGSAKAKSLSSSKDKSTA------------ESVLDV 223

Query: 1150 LHKFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEF 1329
            L +    ++       + K G+ASR  S   + +    K+ +  + DF    + RPPS F
Sbjct: 224  LRESRKNVR----GIRSNKGGKASRWKSGVPKKIEGMGKKANAATQDFK---LLRPPSNF 276

Query: 1330 VRKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQF 1509
            V++SP+P     +    V GL++  ++    + ++  +KL + +                
Sbjct: 277  VKRSPVPYPTAPR----VKGLEQNNEV----VATNEGLKLANIE---------------- 312

Query: 1510 DDLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
                K KL+EL++ AK+ G+KGYSR KK +L
Sbjct: 313  ----KLKLTELKDLAKARGIKGYSRFKKSEL 339


>ref|XP_006833047.1| hypothetical protein AMTR_s00170p00016030 [Amborella trichopoda]
            gi|548837640|gb|ERM98325.1| hypothetical protein
            AMTR_s00170p00016030 [Amborella trichopoda]
          Length = 234

 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 63/210 (30%), Positives = 96/210 (45%)
 Frame = +1

Query: 973  NSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNIL 1152
            +SSS E+  ALF RIQ            +   S  S N ++   D S + +  + V++ L
Sbjct: 59   DSSSQEEIIALFRRIQSS----------ISKGSPRSTNKSIT--DDSKIKQSADSVLHAL 106

Query: 1153 HKFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEFV 1332
             ++  R    NK+  +G+      +G+  R  +NK+ K  +  +  F    +SRP S FV
Sbjct: 107  RQYPARKL--NKEATSGQGKDVRGRGALRRGSLNKDQKDEEPKTDHFK---LSRPASNFV 161

Query: 1333 RKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQFD 1512
            ++SPIP S  ++ V     L        N LTS +                        D
Sbjct: 162  KRSPIPSSLPREKVDE-KALASGAKTVDNALTSKT-----------------------MD 197

Query: 1513 DLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
            D+   KL ELR+ A+SHG+KGYS+LKK +L
Sbjct: 198  DM---KLMELRKLARSHGMKGYSKLKKGEL 224


>gb|EXB84045.1| hypothetical protein L484_005809 [Morus notabilis]
          Length = 258

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
 Frame = +1

Query: 970  PNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNI 1149
            PNS++ E+  ALF RIQ   + ++++  K        IN++   E +S      E ++ +
Sbjct: 88   PNSANQEEIIALFRRIQSSISKEKSVNDK-------KINADASEEKSSV-----ESILKV 135

Query: 1150 LHKFDDRIKHGNKDQNTGKNGRAS----RKGSFSREWVNKNSKRPDICSTDFSQQTISR- 1314
            L +             +GK G+A     +K S  +  V K  +  +  +   +   +SR 
Sbjct: 136  LRR-------------SGKQGKAKIEEGKKISMRKRVVPKKDQELEGSTPAVTGSKLSRR 182

Query: 1315 PPSEFVRKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSS 1494
            PPS FV++SPIP   I + +        + ++     T++ +  L          H P  
Sbjct: 183  PPSNFVKRSPIPSPTIPRSI--------SLELNSKQSTAAEEEGL----------HLPKV 224

Query: 1495 SEFQFDDLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
             E         KL+EL+E AKS G+KGYSRLKK +L
Sbjct: 225  EEM--------KLAELKELAKSRGIKGYSRLKKSEL 252


>ref|XP_004293969.1| PREDICTED: uncharacterized protein LOC101302333 [Fragaria vesca
            subsp. vesca]
          Length = 257

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 61/209 (29%), Positives = 101/209 (48%)
 Frame = +1

Query: 976  SSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPKHKEPVMNILH 1155
            SS+ E+  +LF RIQ       ++ ++++   T  I S+   E     P   E ++ +L 
Sbjct: 93   SSNQEEIISLFRRIQS------SISKEVESVDTKKIKSDASEEK----PPSAESILRVL- 141

Query: 1156 KFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQTISRPPSEFVR 1335
                  + G+  Q   K  R  RK     + +  N   P +  TDF    ++RPPS+FV+
Sbjct: 142  ------QGGSTKQREVKQDR--RKVDTQEQRIQAN---PSV--TDFK---LTRPPSKFVK 185

Query: 1336 KSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHSPSSSEFQFDD 1515
            +SPIP SA   + RP   + ET+                   NG+ +  + + +E + + 
Sbjct: 186  RSPIPSSA--HMSRPPGEVLETK-------------------NGASV--TTAVTELELER 222

Query: 1516 LGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
            + + KL EL+E AKS G++GYS+LKK +L
Sbjct: 223  VEEMKLPELKELAKSRGMRGYSKLKKKEL 251


>ref|XP_002316817.2| hypothetical protein POPTR_0011s07070g [Populus trichocarpa]
            gi|550327847|gb|EEE97429.2| hypothetical protein
            POPTR_0011s07070g [Populus trichocarpa]
          Length = 308

 Score = 61.6 bits (148), Expect = 9e-07
 Identities = 59/219 (26%), Positives = 88/219 (40%)
 Frame = +1

Query: 946  NHSDTENPPNSSSIEDFKALFWRIQEDPNVQENLGRKLKDNSTSSINSNVKTEDASCLPK 1125
            + S     P SS+  +  ALF RIQ   +  E+   K K  S S+ NS            
Sbjct: 130  SQSSDRKQPMSSNQAEIMALFRRIQSSISKGESTATKKKKASRSNENS------------ 177

Query: 1126 HKEPVMNILHKFDDRIKHGNKDQNTGKNGRASRKGSFSREWVNKNSKRPDICSTDFSQQT 1305
               P  +IL    + ++H  K        R   K    +  V+K+ K             
Sbjct: 178  ---PTNSIL----EVLRHSTKHAKGPSTVREGNKVLTQKRSVSKDQKTQ--AEHALEDVK 228

Query: 1306 ISRPPSEFVRKSPIPLSAIKKLVRPVPGLKETEDMKQNMLTSSSDVKLPSSDNGSFLKHS 1485
            ++RPPS F +KSPIP         P    + T ++                 N    +  
Sbjct: 229  LTRPPSNFTKKSPIP--------SPSTSRENTTEL-----------------NSEASEGK 263

Query: 1486 PSSSEFQFDDLGKYKLSELREYAKSHGLKGYSRLKKLKL 1602
             S+ + +   + K KL+EL+E AKS G+KGYS+LKK +L
Sbjct: 264  ASNHKLELPRVEKMKLTELKELAKSRGIKGYSKLKKGEL 302