BLASTX nr result
ID: Ephedra25_contig00012653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012653
(1269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300170.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein... 175 3e-41
ref|XP_006306689.1| hypothetical protein CARUB_v10008214mg [Caps... 169 2e-39
gb|AAL32541.1| Unknown protein [Arabidopsis thaliana] 169 2e-39
ref|NP_563719.1| ubiquitin-specific protease 2 [Arabidopsis thal... 169 2e-39
ref|XP_006418088.1| hypothetical protein EUTSA_v10006716mg [Eutr... 168 4e-39
ref|XP_002323779.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein... 166 2e-38
gb|EOY05279.1| Ubiquitin carboxyl-terminal hydrolase, putative i... 164 7e-38
ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis l... 157 7e-36
gb|ESW35835.1| hypothetical protein PHAVU_001G268800g [Phaseolus... 155 3e-35
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm... 155 3e-35
ref|XP_004296763.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 155 4e-35
ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabid... 155 4e-35
ref|XP_006591431.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 153 1e-34
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 152 3e-34
ref|XP_006850270.1| hypothetical protein AMTR_s00020p00108940 [A... 151 6e-34
ref|XP_006601870.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 150 8e-34
ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 149 3e-33
ref|XP_006365476.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 148 5e-33
ref|XP_006493055.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 147 7e-33
ref|XP_006420922.1| hypothetical protein CICLE_v10004226mg [Citr... 147 7e-33
>ref|XP_002300170.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein [Populus trichocarpa]
gi|222847428|gb|EEE84975.1| UBIQUITIN-SPECIFIC PROTEASE 2
family protein [Populus trichocarpa]
Length = 925
Score = 175 bits (444), Expect = 3e-41
Identities = 104/284 (36%), Positives = 151/284 (53%), Gaps = 10/284 (3%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQKQAVGQ 937
P++L+ CL +F +PE+L NDNAW+CE C K ++S + +A
Sbjct: 674 PVSLESCLALFIKPELLSNDNAWECENCSNILREQRLDA-------KNKQSKISPKA--- 723
Query: 936 TVNGAESCSEEESV--IVDKEIKSTSDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGFILS 763
++NG E+ + +SV + + S S D T++ G+ ++
Sbjct: 724 SINGDETQIQSDSVKTLSGPPVDSCSVDETSST----------------------GYTMA 761
Query: 762 SLXXXXXXXXXXXXXXXSQDG--------TMRNATKMLRISKAPPVLTIHLKRFTMDSIG 607
++DG R+ATK + I KAPP+LT+HLKRF+ D+ G
Sbjct: 762 KDEQTDCNFPGNCESDVNEDGDKTLKKLNVKRDATKRVLIDKAPPILTVHLKRFSQDARG 821
Query: 606 RLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCD 427
RL KL+ HV+F++ LDLRPY+D RC D + +Y+L+G+VEHSGTM GHY+AYV R D
Sbjct: 822 RLSKLNGHVNFRDVLDLRPYMDPRCVDTQSYVYRLLGVVEHSGTMRGGHYIAYV---RGD 878
Query: 426 GSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 295
K +D WY SD V+EV+ EVL+ +AYLLFYEK
Sbjct: 879 ARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEK 922
>ref|XP_006306689.1| hypothetical protein CARUB_v10008214mg [Capsella rubella]
gi|565498102|ref|XP_006306690.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
gi|482575400|gb|EOA39587.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
gi|482575401|gb|EOA39588.1| hypothetical protein
CARUB_v10008214mg [Capsella rubella]
Length = 959
Score = 169 bits (429), Expect = 2e-39
Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 7/281 (2%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQ----KQ 949
P++++ CLT FT+PEIL +DNAW CE C K ++ SN K+
Sbjct: 702 PVSVERCLTHFTKPEILSDDNAWHCENCSKNLKLQRLKEKQKSKKDESRSSNSSNGWLKE 761
Query: 948 AVGQTVNGAESCSEEESVIVDKEIKSTSDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGFI 769
+ NG ++ +V + ++ D++ N
Sbjct: 762 NENEIGNGVSGETDVLAVTQETSDSCSAKDHSTNGRKAT--------------------- 800
Query: 768 LSSLXXXXXXXXXXXXXXXSQDGTM---RNATKMLRISKAPPVLTIHLKRFTMDSIGRLR 598
SSL + + R+ATK + I+KAPPVLTIHLKRF+ D GRL
Sbjct: 801 -SSLSANESDSKGAQDEDEDSENLITVKRDATKRVLINKAPPVLTIHLKRFSQDLRGRLS 859
Query: 597 KLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQ 418
KL+ HV F+E +DLR Y+DSRC+++D +Y+L G+VEHSGTM GHYVAYVR G Q
Sbjct: 860 KLNGHVAFKEVIDLRQYMDSRCKEEDPPVYRLAGLVEHSGTMRGGHYVAYVR-----GGQ 914
Query: 417 KADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 295
+ + ++ WY +SD +VR+V++ +VL SEAY+LFYE+
Sbjct: 915 RV-KETDSSLTTWYNVSDAYVRQVSWEKVLHSEAYILFYER 954
>gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]
Length = 961
Score = 169 bits (428), Expect = 2e-39
Identities = 105/282 (37%), Positives = 145/282 (51%)
Frame = -1
Query: 1131 EEGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQK 952
++ LP++++ CL FT+ EIL +DNAW CE C ++ KSN +
Sbjct: 703 DDSDLPVSVERCLGHFTKHEILSDDNAWNCENCSKNLKLQRL--------REKRKSNEDE 754
Query: 951 QAVGQTVNGAESCSEEESVIVDKEIKSTSDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGF 772
T NG +E+E + + D N + H G
Sbjct: 755 SRSSNTSNGWVKENEDEGFGETEILAVKQDPNDTSCVKD-----------HSSDGRKAAR 803
Query: 771 ILSSLXXXXXXXXXXXXXXXSQDGTMRNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKL 592
I S+ R+ATK + I+KAPPVLTIHLKRF+ D GRL KL
Sbjct: 804 IHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKL 863
Query: 591 SDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKA 412
+ HV F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYVAYVR G Q+
Sbjct: 864 NGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRGGHYVAYVR-----GGQRV 918
Query: 411 DSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 286
+ ++ WY +SD +VR+V+ +VL SEAY+LFYE+ S
Sbjct: 919 -KETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERIFS 959
>ref|NP_563719.1| ubiquitin-specific protease 2 [Arabidopsis thaliana]
gi|62901383|sp|Q8W4N3.2|UBP2_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=Deubiquitinating enzyme 2; Short=AtUBP2; AltName:
Full=Ubiquitin thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|7211980|gb|AAF40451.1|AC004809_9 Strong similarity to
the putative ubiquitin-specific protease F24L7.8 from A.
thaliana gi|2914695 on BAC gb|AC003974 and to ubiquitin
carboxyl-terminal hydrolase family PF|00442 and PF|00443.
ESTs gb|Z17750 and gb|Z17572 come from this gene
[Arabidopsis thaliana]
gi|11993463|gb|AAG42750.1|AF302659_1 ubiquitin-specific
protease 2 [Arabidopsis thaliana]
gi|332189631|gb|AEE27752.1| ubiquitin-specific protease 2
[Arabidopsis thaliana]
Length = 961
Score = 169 bits (428), Expect = 2e-39
Identities = 105/282 (37%), Positives = 145/282 (51%)
Frame = -1
Query: 1131 EEGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQK 952
++ LP++++ CL FT+ EIL +DNAW CE C ++ KSN +
Sbjct: 703 DDSDLPVSVERCLGHFTKHEILSDDNAWNCENCSKNLKLQRL--------REKRKSNEDE 754
Query: 951 QAVGQTVNGAESCSEEESVIVDKEIKSTSDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGF 772
T NG +E+E + + D N + H G
Sbjct: 755 SRSSNTSNGWVKENEDEGFGETEILAVKQDPNDTSCVKD-----------HSSDGRKAAR 803
Query: 771 ILSSLXXXXXXXXXXXXXXXSQDGTMRNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKL 592
I S+ R+ATK + I+KAPPVLTIHLKRF+ D GRL KL
Sbjct: 804 IHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKL 863
Query: 591 SDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKA 412
+ HV F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYVAYVR G Q+
Sbjct: 864 NGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRGGHYVAYVR-----GGQRV 918
Query: 411 DSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 286
+ ++ WY +SD +VR+V+ +VL SEAY+LFYE+ S
Sbjct: 919 -KETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERIFS 959
>ref|XP_006418088.1| hypothetical protein EUTSA_v10006716mg [Eutrema salsugineum]
gi|557095859|gb|ESQ36441.1| hypothetical protein
EUTSA_v10006716mg [Eutrema salsugineum]
Length = 944
Score = 168 bits (426), Expect = 4e-39
Identities = 109/278 (39%), Positives = 146/278 (52%), Gaps = 1/278 (0%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQKQAVGQ 937
P++++ CL FT+PEIL +DNAW CE C K ++ SN V +
Sbjct: 704 PVSVERCLAHFTKPEILSDDNAWNCENCSKNLKLQRLREKQKSKKDESRSSNTNNGWVSE 763
Query: 936 TVNGAESCSEEESVIVDKEIKSTSDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGFILSSL 757
+G SEE V K+ S ++ N + GD S
Sbjct: 764 NEDGF---SEETVVQAMKQDPSDNEAMGTNSANDS------------ESGDEEAVDDSEK 808
Query: 756 XXXXXXXXXXXXXXXSQDGTMRNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVD 577
R+ATK + ++KAPPVLTIHLKRF+ D GRL KL+ HV
Sbjct: 809 LVT----------------VKRDATKRVLLNKAPPVLTIHLKRFSQDLRGRLSKLNGHVA 852
Query: 576 FQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKA-DSDN 400
F+E +DLR Y+DSRC +D +Y+L G+VEHSGTM GHYVAYVR G QKA D+D+
Sbjct: 853 FKEFIDLRHYMDSRCNGEDPPIYRLAGLVEHSGTMRGGHYVAYVR-----GGQKAKDTDS 907
Query: 399 PAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 286
+ WY +SD+ VR+V+ +VL SEAY+LFYE+ S
Sbjct: 908 SSV---WYHVSDSHVRQVSLEKVLHSEAYILFYERIFS 942
>ref|XP_002323779.1| UBIQUITIN-SPECIFIC PROTEASE 2 family protein [Populus trichocarpa]
gi|222866781|gb|EEF03912.1| UBIQUITIN-SPECIFIC PROTEASE 2
family protein [Populus trichocarpa]
Length = 910
Score = 166 bits (420), Expect = 2e-38
Identities = 102/280 (36%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQKQAVGQ 937
P++++ CL+ F +PE+L NDNAW+CE C Q+ + Q + +
Sbjct: 644 PVSIESCLSHFVKPELLSNDNAWECENCSKILQQ-----------QRLDAKKKQAKISSK 692
Query: 936 TV-NGAESCSEEESVIVDKEIKSTSDD----NTNNXXXXXXXXXXXSMFRHLDGGDVYGF 772
T+ NG S ++ + EI T + + + +G + G
Sbjct: 693 TLLNGGNDSSNKK--FIQAEIVQTEMEPFISQSEERKYEMNVSHSSGYYESCNGETLSGP 750
Query: 771 ILSSLXXXXXXXXXXXXXXXSQD-GTMRNATKMLRISKAPPVLTIHLKRFTMDSIGRLRK 595
+ S S+ R+ATK + I KAPP+LTIHLKRF+ D+ GRL K
Sbjct: 751 PVDSCSVDETRDVNEDEDKTSKKLNVKRDATKRVLIDKAPPILTIHLKRFSQDARGRLCK 810
Query: 594 LSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQK 415
LS HV F++ LDL PY+D RC D + +Y+L+G+VEH GTM GHY+AYV R D K
Sbjct: 811 LSGHVTFRDVLDLGPYMDPRCVDTERYVYRLLGVVEHLGTMRGGHYIAYV---RGDERNK 867
Query: 414 ADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEK 295
+D WY SD VREV+ EVL+ +AYLLFYEK
Sbjct: 868 GKADKEQGGSVWYYASDAHVREVSLEEVLRCDAYLLFYEK 907
>gb|EOY05279.1| Ubiquitin carboxyl-terminal hydrolase, putative isoform 1 [Theobroma
cacao] gi|508713383|gb|EOY05280.1| Ubiquitin
carboxyl-terminal hydrolase, putative isoform 1
[Theobroma cacao]
Length = 1028
Score = 164 bits (415), Expect = 7e-38
Identities = 76/133 (57%), Positives = 101/133 (75%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
RNATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F+E +DLRPY+D+RC+D DNC
Sbjct: 898 RNATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFRETIDLRPYVDARCEDIDNC 957
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
+Y L+G+VEHSGTM GHY+AYVR +K ++ WY +SD +VR+V+ E
Sbjct: 958 IYHLMGVVEHSGTMRGGHYIAYVRGGE---KRKGKAETEYVSSPWYYVSDHYVRQVSLEE 1014
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 1015 VLRCEAYILFYEK 1027
>ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
gi|297338089|gb|EFH68506.1| ubiquitin-specific protease 2
[Arabidopsis lyrata subsp. lyrata]
Length = 927
Score = 157 bits (398), Expect = 7e-36
Identities = 101/280 (36%), Positives = 146/280 (52%), Gaps = 3/280 (1%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQKQAVGQ 937
P++++ CL FT+PEIL +DNAW CE C K ++ SN V +
Sbjct: 674 PVSVERCLAHFTKPEILSDDNAWHCENCSKNLKLQRLREKQKSKKDESRSSNTSNGWVKE 733
Query: 936 TVNGAESCSEEESVIVDKEIKST---SDDNTNNXXXXXXXXXXXSMFRHLDGGDVYGFIL 766
N +E E + + V ++ T D ++N S + D +
Sbjct: 734 --NESEGFGETDILAVKQDPNDTCCVKDHSSNGRKATRSHSADESESKGTQDEDEDSEKV 791
Query: 765 SSLXXXXXXXXXXXXXXXSQDGTMRNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSD 586
++ R+A+K + I+KAPPVLTIHLKRF+ D GRL KL+
Sbjct: 792 ITVK--------------------RDASKRVLINKAPPVLTIHLKRFSQDLRGRLSKLNG 831
Query: 585 HVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADS 406
HV FQE +DL Y+D+R +D +Y+L G+VEHSGTM GHYVAYVR G Q+
Sbjct: 832 HVAFQEVIDLGQYMDTRFSGEDPPVYRLAGLVEHSGTMRGGHYVAYVR-----GGQRV-K 885
Query: 405 DNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFYEKDLS 286
++ ++ WY +SD VR+V+ +VL SEAY+LFYE+ +S
Sbjct: 886 ESDSSSTVWYNVSDAHVRQVSLEKVLHSEAYILFYERIIS 925
>gb|ESW35835.1| hypothetical protein PHAVU_001G268800g [Phaseolus vulgaris]
Length = 978
Score = 155 bits (392), Expect = 3e-35
Identities = 75/133 (56%), Positives = 99/133 (74%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+EK+D+RPY+D RC ++
Sbjct: 849 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFREKMDIRPYIDPRCIIEEKY 908
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y+L+G+VEHSGTM GHYVAYVR G + + +N + WY+ SD +VREV+ E
Sbjct: 909 EYQLVGLVEHSGTMRGGHYVAYVR----GGHRNSGKENEGSTSTWYQASDAYVREVSLDE 964
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 965 VLRCEAYILFYEK 977
>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
gi|223542682|gb|EEF44219.1| conserved hypothetical
protein [Ricinus communis]
Length = 1006
Score = 155 bits (392), Expect = 3e-35
Identities = 73/133 (54%), Positives = 97/133 (72%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + + KAPP+LTIHLKRF+ D+ GRL KL+ HV+F + LDLRPY+D RC D++
Sbjct: 876 RDATKRVLVDKAPPILTIHLKRFSQDARGRLSKLNGHVNFGDVLDLRPYMDPRCTDREKY 935
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
+Y+L+G+VEH GTM GHYVAYVR + K ++N + WY SD +VREV+ E
Sbjct: 936 VYRLLGVVEHLGTMRGGHYVAYVRGGQ---KSKGKAENESGSSVWYHASDAYVREVSLEE 992
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 993 VLRCEAYILFYEK 1005
>ref|XP_004296763.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Fragaria
vesca subsp. vesca]
Length = 1008
Score = 155 bits (391), Expect = 4e-35
Identities = 77/133 (57%), Positives = 95/133 (71%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I +APP+LTIHLKRF+ D+ GRL KL+ HV F+EK++LRPY+DSRC++K+N
Sbjct: 878 RDATKRVLIGRAPPILTIHLKRFSQDARGRLSKLNGHVTFREKIELRPYMDSRCREKENY 937
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y LIG+VEHSGTM GHYVAYVR K + N WY SD VREV+ E
Sbjct: 938 EYHLIGVVEHSGTMRGGHYVAYVRGGE---RSKGKTGNEKIGHAWYYASDAHVREVSLEE 994
Query: 333 VLQSEAYLLFYEK 295
VL EAY+LFYEK
Sbjct: 995 VLHCEAYILFYEK 1007
>ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
gi|62901388|sp|Q9FPT5.2|UBP1_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 1; AltName:
Full=Deubiquitinating enzyme 1; Short=AtUBP1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|2914695|gb|AAC04485.1| ubiquitin-specific protease 1
(UBP1), putative [Arabidopsis thaliana]
gi|330253645|gb|AEC08739.1| ubiquitin carboxyl-terminal
hydrolase 1 [Arabidopsis thaliana]
Length = 1083
Score = 155 bits (391), Expect = 4e-35
Identities = 106/305 (34%), Positives = 145/305 (47%), Gaps = 26/305 (8%)
Frame = -1
Query: 1131 EEGFLPMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQK 952
+E P+++D CL FT+ EIL DNAW CE C ++ K L
Sbjct: 793 DESDSPVSVDRCLAQFTKHEILSEDNAWHCENCSKNLKLQRLRE------KRRTKEGLSN 846
Query: 951 QAVGQTVNGAESCSEE------ESVIVD-----------------KEIKSTSDDNTNNXX 841
+ V + NGA S +E +D KE +S DD
Sbjct: 847 RWVNE--NGASSAFDECRDSSLNQSCIDLENGYKAAPPITKLPNCKEEESAIDDGFVGEE 904
Query: 840 XXXXXXXXXSMFRHLDGGDVYGFILSSLXXXXXXXXXXXXXXXSQDGTM--RNATKMLRI 667
L GG+ +SS + + R+A K + I
Sbjct: 905 NTKQAPITSVTETPLLGGET----ISSQPASDNECENWEDLAVDSEEVIVKRDARKKVLI 960
Query: 666 SKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVE 487
+KAPPVLTIHLKRF+ D+ GR+ KLS HVDFQE +DL Y+D+RC ++D +Y+L G+VE
Sbjct: 961 NKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVE 1020
Query: 486 HSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDK-WYRISDTFVREVTFSEVLQSEAYL 310
H G M GHYV+Y+R ++ DSD WY SD+ VR + EVL+SEAY+
Sbjct: 1021 HLGAMSRGHYVSYIRGGH---KERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYI 1077
Query: 309 LFYEK 295
LFYE+
Sbjct: 1078 LFYER 1082
>ref|XP_006591431.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 980
Score = 153 bits (387), Expect = 1e-34
Identities = 74/133 (55%), Positives = 99/133 (74%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+E +D+RPY+D RC +++
Sbjct: 849 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKY 908
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y L+G+VEHSGTM GHYVAYVR + + + D +N + WY+ SD +VREV+ E
Sbjct: 909 EYHLVGLVEHSGTMRGGHYVAYVRGGQRNSGKGGDKENEGS--TWYQASDAYVREVSLDE 966
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 967 VLRCEAYILFYEK 979
>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
hydrolase [Medicago truncatula]
Length = 1070
Score = 152 bits (384), Expect = 3e-34
Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 28/303 (9%)
Frame = -1
Query: 1116 PMTLDGCLTVFTRPEILCNDNAWKCEGCXXXXXXXXXXXXXXXXKQKTEKSNLQKQAVGQ 937
P++++ CL F +PE+L ++NAW C ++KT + +
Sbjct: 773 PVSVESCLAHFIKPELLSDENAWH---CENCSKILQRQKKKAKEQEKTLSDGNASGSHDE 829
Query: 936 TVNGAESCSEE------ESVIVDKEIKST-------------SDDNTNNXXXXXXXXXXX 814
+ + +++CS + E + DK I+S+ D N
Sbjct: 830 SWHASKACSFKVSSTGNEDIENDKNIESSVSHVQHGTELENGQKDELRNCELQSSSLHQP 889
Query: 813 SMFRHLDGGDVYGFILSSLXXXXXXXXXXXXXXXSQDG---------TMRNATKMLRISK 661
+ D V I ++ G R+ATK + I +
Sbjct: 890 NNEESCDNSAVDSSITGNVQQDAPMLNNDDNDSEECSGKETGLESIRVNRDATKRVLIYR 949
Query: 660 APPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNCLYKLIGIVEHS 481
APPVLTIHLKRF+ D+ GRL KL+ HV+F+E +DLRPY+D RC +++ Y+L+G+VEHS
Sbjct: 950 APPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDLRPYMDPRCINEEEYKYQLVGVVEHS 1009
Query: 480 GTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSEVLQSEAYLLFY 301
GTM GHYVAYVR + + + + +N ++ WY SD +VR+V+ EVL+ EAY+LFY
Sbjct: 1010 GTMRGGHYVAYVRGGQRNREKVDNKENESS--TWYHASDAYVRQVSLDEVLRCEAYILFY 1067
Query: 300 EKD 292
E++
Sbjct: 1068 ERN 1070
>ref|XP_006850270.1| hypothetical protein AMTR_s00020p00108940 [Amborella trichopoda]
gi|548853891|gb|ERN11851.1| hypothetical protein
AMTR_s00020p00108940 [Amborella trichopoda]
Length = 1049
Score = 151 bits (381), Expect = 6e-34
Identities = 80/142 (56%), Positives = 98/142 (69%), Gaps = 4/142 (2%)
Frame = -1
Query: 708 QDGTM----RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLD 541
+DG M R+ TK ISKAPPVLTIHLKRF+ D+ GRL KL+ HV+F+E L+LRPY+D
Sbjct: 910 KDGQMECFKRDGTKRFLISKAPPVLTIHLKRFSQDARGRLSKLNGHVNFREMLELRPYMD 969
Query: 540 SRCQDKDNCLYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDT 361
RC DKD+ LY L+G+VEHSG+M GHYVAYVR G D E W+ SD
Sbjct: 970 RRCPDKDSSLYSLVGVVEHSGSMRGGHYVAYVR-----GPHSRDPQG-LGEYSWFYASDV 1023
Query: 360 FVREVTFSEVLQSEAYLLFYEK 295
V V+ +EVL+SEAY+LFYEK
Sbjct: 1024 NVSRVSLTEVLKSEAYILFYEK 1045
>ref|XP_006601870.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
Length = 980
Score = 150 bits (380), Expect = 8e-34
Identities = 75/133 (56%), Positives = 98/133 (73%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I KAPPVLTIHLKRF+ D+ GRL KL+ HV+F+E +D+RPY+D RC +++
Sbjct: 850 RDATKRVLIYKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKY 909
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y L+G+VEHSGTM GHYVAYVR + K D +N + WY+ SD +VREV+ E
Sbjct: 910 AYHLVGLVEHSGTMRGGHYVAYVRGGQ-RNCGKGDKENEGS--TWYQASDAYVREVSLDE 966
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 967 VLRCEAYILFYEK 979
>ref|XP_004134376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Cucumis
sativus]
Length = 980
Score = 149 bits (375), Expect = 3e-33
Identities = 75/134 (55%), Positives = 92/134 (68%), Gaps = 2/134 (1%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK I KAPP+LTIH+KRF+ D+ GR KL+ HV F+E +DL+PYLD+RC D+D C
Sbjct: 850 RDATKRFLIHKAPPILTIHMKRFSPDARGRYSKLNGHVRFKETIDLKPYLDTRCADRDKC 909
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDK--WYRISDTFVREVTF 340
Y+L+G+VEHSG+M GHYVAYVR G + S A ED WY SD V EVT
Sbjct: 910 SYRLVGVVEHSGSMRGGHYVAYVR-----GGNRKRSSGEAEEDASVWYYASDAVVDEVTL 964
Query: 339 SEVLQSEAYLLFYE 298
VL EAY+LFYE
Sbjct: 965 DRVLGCEAYILFYE 978
>ref|XP_006365476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Solanum
tuberosum]
Length = 1010
Score = 148 bits (373), Expect = 5e-33
Identities = 74/133 (55%), Positives = 95/133 (71%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I K PP+L+IHLKRF D+ GRL KLS HV+F++ +DL+PY+D+RC KD
Sbjct: 881 RDATKRILIDKVPPILSIHLKRFRQDARGRLSKLSCHVNFRDAVDLKPYVDTRCLQKDTY 940
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y+LIG+V HSGTM GHYVAYVR G + D A + WY SDT VREV+ +
Sbjct: 941 KYQLIGVVVHSGTMRGGHYVAYVR----GGPKITGKDENAEDFVWYYASDTHVREVSLKD 996
Query: 333 VLQSEAYLLFYEK 295
VL+SEAY+LFYE+
Sbjct: 997 VLRSEAYILFYEE 1009
>ref|XP_006493055.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Citrus
sinensis]
Length = 1046
Score = 147 bits (372), Expect = 7e-33
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F E ++LRPY+D C D DN
Sbjct: 916 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 975
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y+L+G+VEH GTM GHYVAYVR K + + WY SD +VREV+ E
Sbjct: 976 DYRLVGVVEHLGTMRGGHYVAYVRGG---PKNKVKAKKESVGGVWYHASDVYVREVSLEE 1032
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 1033 VLRCEAYILFYEK 1045
>ref|XP_006420922.1| hypothetical protein CICLE_v10004226mg [Citrus clementina]
gi|567855607|ref|XP_006420923.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
gi|557522795|gb|ESR34162.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
gi|557522796|gb|ESR34163.1| hypothetical protein
CICLE_v10004226mg [Citrus clementina]
Length = 1042
Score = 147 bits (372), Expect = 7e-33
Identities = 73/133 (54%), Positives = 93/133 (69%)
Frame = -1
Query: 693 RNATKMLRISKAPPVLTIHLKRFTMDSIGRLRKLSDHVDFQEKLDLRPYLDSRCQDKDNC 514
R+ATK + I+KAPP+LTIHLKRF+ D+ GRL KL+ HV+F E ++LRPY+D C D DN
Sbjct: 912 RDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPYMDPGCTDHDNY 971
Query: 513 LYKLIGIVEHSGTMGCGHYVAYVRVSRCDGSQKADSDNPAAEDKWYRISDTFVREVTFSE 334
Y+L+G+VEH GTM GHYVAYVR K + + WY SD +VREV+ E
Sbjct: 972 DYRLVGVVEHLGTMRGGHYVAYVRGG---PKNKVKAKKESVGGVWYHASDVYVREVSLEE 1028
Query: 333 VLQSEAYLLFYEK 295
VL+ EAY+LFYEK
Sbjct: 1029 VLRCEAYILFYEK 1041