BLASTX nr result

ID: Ephedra25_contig00012467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012467
         (1114 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76664.1| unknown [Picea sitchensis]                              63   2e-07

>gb|ADE76664.1| unknown [Picea sitchensis]
          Length = 290

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
 Frame = +2

Query: 227 DLLIEDQQTADAISRGALSAXXXXXXXXXFNVSKGAAILELDDNMPEVLKDLHYLQIFRV 406
           D  +ED+ T     RG             F++ K    L L  +M E ++ L  + +   
Sbjct: 77  DYQLEDEGTF----RGMTKMRTLYVRYVHFDIFKSEG-LHLPTDM-EAMERLEIVHLICC 130

Query: 407 KPPKSISHFRQLQELTLFDTHVEDYGDL-GLERLPCLADLSIWYGHCE---EFPDSFGKA 574
             PK I   + L ELTL   +     D  GLE++P L  L + +       EFP+ FG+A
Sbjct: 131 VVPKWIFQLQNLMELTLHGMYNASSADFRGLEKIPNLKKLLLGWNQNPDFIEFPNEFGEA 190

Query: 575 GAFPRLVELRLYSFPSLKKMPSIEEGGMP---CLKSADLGWCPNLTDG 709
           GAF +L EL ++ F  LK +PS  E  MP   CLK  +     N+ +G
Sbjct: 191 GAFLKLEELVIHYFKHLKSIPSFHEDAMPRLRCLKITECQPLENMPEG 238


Top