BLASTX nr result

ID: Ephedra25_contig00012450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012450
         (870 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001782727.1| predicted protein [Physcomitrella patens] gi...   106   1e-20
ref|XP_001761944.1| predicted protein [Physcomitrella patens] gi...    85   3e-14
ref|XP_006826667.1| hypothetical protein AMTR_s00137p00039300 [A...    61   5e-07

>ref|XP_001782727.1| predicted protein [Physcomitrella patens] gi|162665820|gb|EDQ52492.1|
            predicted protein [Physcomitrella patens]
          Length = 1315

 Score =  106 bits (264), Expect = 1e-20
 Identities = 60/116 (51%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = -1

Query: 720  EGEEKKLQTPTKRQESLIPPPLPS-RVKR-TNQEVSKAFGLKTSKSGRLIVPPLAHWRSQ 547
            EG        + R+ S++PPPLPS RV+     +V +AFGLKTS+SGRL+VP LA+WRSQ
Sbjct: 1165 EGHNPVPSKQSSRRTSIMPPPLPSPRVQGGLKGKVPEAFGLKTSRSGRLLVPALAYWRSQ 1224

Query: 546  RIMHDMDGGIIAIFDGSQADKPPDSESCMFTPPTQRRAIALQKRLCAAAETPVAKK 379
             I +D DGGIIAIFDG QA  P D+    FTPP ++ A  +Q++LC AA T   +K
Sbjct: 1225 SIEYDKDGGIIAIFDGFQA-TPSDTGCFNFTPPQEKHAKKIQEKLCKAAATVKKRK 1279


>ref|XP_001761944.1| predicted protein [Physcomitrella patens] gi|162686999|gb|EDQ73385.1|
            predicted protein [Physcomitrella patens]
          Length = 1232

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
 Frame = -1

Query: 684  RQESLIPPPLPS-RVKR-TNQEVSKAFGLKTSKSGRLIVPPLAHWRSQRIMHDMDGGIIA 511
            R+ S+IPPPLP  RV+     +V +AFGLKTS+SGRL+VPPLA+WRSQ I +D DGGIIA
Sbjct: 1167 RRTSIIPPPLPPPRVENGLKSKVPEAFGLKTSRSGRLLVPPLAYWRSQTIEYDKDGGIIA 1226

Query: 510  IFDGSQ 493
            IFDG Q
Sbjct: 1227 IFDGFQ 1232


>ref|XP_006826667.1| hypothetical protein AMTR_s00137p00039300 [Amborella trichopoda]
           gi|548831068|gb|ERM93904.1| hypothetical protein
           AMTR_s00137p00039300 [Amborella trichopoda]
          Length = 479

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 7/185 (3%)
 Frame = -1

Query: 870 LPCQNNLSSFGEAAASSNHN-LRTPDQRFSFSLDTPVSNKSHL-----EKHKT-HTVEGE 712
           L C  NL      ++S     L+TP  R   +L +P      L     ++ KT H    E
Sbjct: 292 LNCSVNLVKKSRTSSSKELKALQTPLSREFKTLYSPSKELKALRIPVSKEFKTLHFPSKE 351

Query: 711 EKKLQTPTKRQESLIPPPLPSRVKRTNQEVSKAFGLKTSKSGRLIVPPLAHWRSQRIMHD 532
            K L+ P  ++ +++  P  S+     Q  SK   L  S+SGR+IV PLA+W ++RI++ 
Sbjct: 352 SKALRIPVSKELNVLQTP--SKGLTALQTPSKESKLSISRSGRIIVRPLAYWCNERIVYG 409

Query: 531 MDGGIIAIFDGSQADKPPDSESCMFTPPTQRRAIALQKRLCAAAETPVAKKLKRSMPARK 352
            DG I +I DG + D+   +      PP +R             E P  +KL R+    K
Sbjct: 410 KDGSITSILDGDKYDE-QCTRGSKSAPPKRRHTRNQNSSKSKQGERPSERKLTRNEKPSK 468

Query: 351 TER*P 337
            +  P
Sbjct: 469 PKGSP 473


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