BLASTX nr result

ID: Ephedra25_contig00012334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012334
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELQ73862.1| Ubiquitin/40S ribosomal protein S27a fusion [Trac...    59   8e-07
ref|XP_006900562.1| PREDICTED: polyubiquitin-C-like [Elephantulu...    59   1e-06
ref|XP_006158522.1| PREDICTED: ubiquitin-40S ribosomal protein S...    59   1e-06
ref|XP_006082981.1| PREDICTED: ubiquitin-40S ribosomal protein S...    59   1e-06
ref|NP_001174456.1| Os05g0457400 [Oryza sativa Japonica Group] g...    59   1e-06
gb|ELA47544.1| ubiquitin-40S ribosomal protein S27a [Vavraia cul...    58   2e-06
ref|XP_006729877.1| PREDICTED: ubiquitin-40S ribosomal protein S...    57   2e-06
ref|XP_002763251.1| PREDICTED: ubiquitin-40S ribosomal protein S...    57   2e-06
tpg|DAA62782.1| TPA: hypothetical protein ZEAMMB73_295026 [Zea m...    57   3e-06
ref|XP_006860312.1| PREDICTED: polyubiquitin-B-like [Chrysochlor...    57   4e-06
gb|AGZ15412.1| fiber polyubiquitin [Phaseolus vulgaris]                57   4e-06
ref|XP_004956641.1| PREDICTED: ubiquitin-60S ribosomal protein L...    57   4e-06
ref|XP_004956640.1| PREDICTED: ubiquitin-60S ribosomal protein L...    57   4e-06
ref|XP_001770630.1| predicted protein [Physcomitrella patens] gi...    57   4e-06
ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [S...    57   4e-06
ref|XP_001770725.1| predicted protein [Physcomitrella patens] gi...    57   4e-06
ref|XP_004982762.1| PREDICTED: ubiquitin-40S ribosomal protein S...    56   5e-06
ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquiti...    56   5e-06
tpg|DAA26453.1| TPA: ubiquitin and ribosomal protein S27a-like [...    56   5e-06
ref|XP_005678981.1| PREDICTED: ubiquitin-40S ribosomal protein S...    56   6e-06

>gb|ELQ73862.1| Ubiquitin/40S ribosomal protein S27a fusion [Trachipleistophora
           hominis]
          Length = 150

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 40/95 (42%), Positives = 51/95 (53%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKIV*FPNRRRSSYRNGKVWSFKY 180
           KIQDKEG PPDQ  LIFA KQLED  TL+DY I K+S +      R    +  KV++   
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKKKKKKVYTTPK 88

Query: 181 FQKPSFSPRRYVASMSS*QVLIKLKPKKSKNISIL 285
            +KP     + V       VL +    KS N+S+L
Sbjct: 89  KEKPKRIDTKDV-------VLTQFSVDKSGNVSVL 116


>ref|XP_006900562.1| PREDICTED: polyubiquitin-C-like [Elephantulus edwardii]
          Length = 153

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/46 (65%), Positives = 33/46 (71%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKIV*FPNRR 138
           KIQDKEG PPDQ  LIFA KQLED CTL+DY I K+S +   P  R
Sbjct: 29  KIQDKEGVPPDQQRLIFAGKQLEDGCTLSDYNIQKESTLHLVPRLR 74



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFARKQLED  TL+DY I K+S +
Sbjct: 105 KIQDKEGIPPDQQRLIFARKQLEDGRTLSDYNIQKESTL 143


>ref|XP_006158522.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Tupaia
           chinensis]
          Length = 257

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 30/37 (81%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDS 111
           KIQDKEG PPDQ  LIFA KQLED CTL+DY I KDS
Sbjct: 131 KIQDKEGIPPDQQRLIFAGKQLEDGCTLSDYNIQKDS 167


>ref|XP_006082981.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Myotis
           lucifugus]
          Length = 155

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTL+DY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFADKQLEDRCTLSDYNIQKESTV 67


>ref|NP_001174456.1| Os05g0457400 [Oryza sativa Japonica Group]
           gi|222631836|gb|EEE63968.1| hypothetical protein
           OsJ_18793 [Oryza sativa Japonica Group]
           gi|255676421|dbj|BAH93184.1| Os05g0457400 [Oryza sativa
           Japonica Group]
          Length = 99

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTLADY I K+S +
Sbjct: 45  KIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQKESTL 83


>gb|ELA47544.1| ubiquitin-40S ribosomal protein S27a [Vavraia culicis subsp.
           floridensis]
          Length = 150

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/95 (41%), Positives = 51/95 (53%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKIV*FPNRRRSSYRNGKVWSFKY 180
           KIQDKEG PPDQ  LIFA KQLED  TL+DY I K+S +      R    +  KV++   
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGKKKKKKVYTTPK 88

Query: 181 FQKPSFSPRRYVASMSS*QVLIKLKPKKSKNISIL 285
            +KP     + V       VL +    K+ N+S+L
Sbjct: 89  KEKPKRIDTKDV-------VLTQFSVDKNGNVSVL 116


>ref|XP_006729877.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Leptonychotes
           weddellii]
          Length = 156

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTL+DY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGCTLSDYNIQKESTL 67


>ref|XP_002763251.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Callithrix
           jacchus]
          Length = 156

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTL+DY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGCTLSDYNIQKESTL 67


>tpg|DAA62782.1| TPA: hypothetical protein ZEAMMB73_295026 [Zea mays]
          Length = 141

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED+ TLADY I KDS +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDDRTLADYSIQKDSTL 67


>ref|XP_006860312.1| PREDICTED: polyubiquitin-B-like [Chrysochloris asiatica]
          Length = 152

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTL DY I K+S +
Sbjct: 104 KIQDKEGIPPDQQRLIFAGKQLEDGCTLPDYNIQKESTL 142



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIF  KQLED CTL+DY I K+S +
Sbjct: 28  KIQDKEGIPPDQQRLIFVGKQLEDGCTLSDYNIQKESTL 66


>gb|AGZ15412.1| fiber polyubiquitin [Phaseolus vulgaris]
          Length = 229

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KD 108
           KIQDKEG PPDQ  LIFA KQLED CTLADY I K+
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQKE 216


>ref|XP_004956641.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform X2
           [Setaria italica]
          Length = 140

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67


>ref|XP_004956640.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform X1
           [Setaria italica]
          Length = 218

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 105 KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 143


>ref|XP_001770630.1| predicted protein [Physcomitrella patens]
           gi|81230136|dbj|BAE48267.1| putative polyubiquitin
           [Physcomitrella patens] gi|81230138|dbj|BAE48268.1|
           putative polyubiquitin [Physcomitrella patens]
           gi|162678151|gb|EDQ64613.1| predicted protein
           [Physcomitrella patens]
          Length = 153

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67


>ref|XP_002460099.1| hypothetical protein SORBIDRAFT_02g022750 [Sorghum bicolor]
           gi|241923476|gb|EER96620.1| hypothetical protein
           SORBIDRAFT_02g022750 [Sorghum bicolor]
          Length = 139

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67


>ref|XP_001770725.1| predicted protein [Physcomitrella patens]
           gi|162677943|gb|EDQ64407.1| predicted protein
           [Physcomitrella patens]
          Length = 153

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67


>ref|XP_004982762.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-1-like [Setaria
           italica]
          Length = 162

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           K+QDKEG PPDQ  LIFA KQLEDE TLADY I K+S +
Sbjct: 29  KVQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTL 67


>ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
           distachyon]
          Length = 535

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEGTPPDQ  LIFA KQLED  TLADY I K+S +
Sbjct: 487 KIQDKEGTPPDQQQLIFAGKQLEDGRTLADYNIQKESTL 525


>tpg|DAA26453.1| TPA: ubiquitin and ribosomal protein S27a-like [Bos taurus]
          Length = 156

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIFA KQLED CTL+DY + K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFAGKQLEDGCTLSDYNMQKESTL 67


>ref|XP_005678981.1| PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Capra hircus]
          Length = 106

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +1

Query: 1   KIQDKEGTPPDQ*GLIFARKQLEDECTLADYKI*KDSKI 117
           KIQDKEG PPDQ  LIF  KQLED CTL+DY I K+S +
Sbjct: 29  KIQDKEGIPPDQQRLIFVGKQLEDGCTLSDYNIQKESTL 67


Top