BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012188
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527...   191   2e-46
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [...   190   2e-46
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   189   5e-46
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ...   189   6e-46
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus...   188   8e-46
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su...   188   8e-46
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr...   188   1e-45
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin...   188   1e-45
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu...   187   1e-45
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   187   2e-45
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps...   187   2e-45
gb|AFK35928.1| unknown [Lotus japonicus]                              187   2e-45
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri...   187   2e-45
gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]       186   4e-45
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe...   186   4e-45
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su...   186   5e-45
ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II su...   184   1e-44
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin...   184   1e-44
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g...   184   2e-44
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop...   183   3e-44

>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
           max]
          Length = 138

 Score =  191 bits (484), Expect = 2e-46
 Identities = 92/122 (75%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score =  190 bits (483), Expect = 2e-46
 Identities = 92/122 (75%), Positives = 107/122 (87%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +YEQLQQ SED  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR  DDD IE+M+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  189 bits (480), Expect = 5e-46
 Identities = 91/122 (74%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
           gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
           II subunit RPB4 [Medicago truncatula]
           gi|388497296|gb|AFK36714.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  189 bits (479), Expect = 6e-46
 Identities = 90/122 (73%), Positives = 109/122 (89%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQ+S+DA +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
          Length = 138

 Score =  188 bits (478), Expect = 8e-46
 Identities = 90/122 (73%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Cucumis sativus] gi|449526195|ref|XP_004170099.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB4-like [Cucumis sativus]
          Length = 138

 Score =  188 bits (478), Expect = 8e-46
 Identities = 92/122 (75%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQ SED ++Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR+VL RY LAEFELCVLGNLCP+T+EEA AMVPSLK+KGR  DD+ IEKM+NDL +I++
Sbjct: 77  VREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHDDEAIEKMLNDLSLIKR 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4-like isoform X2 [Citrus
           sinensis] gi|557530000|gb|ESR41250.1| hypothetical
           protein CICLE_v10026735mg [Citrus clementina]
          Length = 138

 Score =  188 bits (477), Expect = 1e-45
 Identities = 89/122 (72%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVA+IL+ +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
           gi|255632071|gb|ACU16388.1| unknown [Glycine max]
          Length = 138

 Score =  188 bits (477), Expect = 1e-45
 Identities = 90/122 (73%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA A+VPS+KS+GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222853507|gb|EEE91054.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| hypothetical protein
           POPTR_0005s08690g [Populus trichocarpa]
          Length = 138

 Score =  187 bits (476), Expect = 1e-45
 Identities = 90/122 (73%), Positives = 107/122 (87%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           +FLKA+CLMN EVALILE +YEQLQQ S+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  DFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  187 bits (475), Expect = 2e-45
 Identities = 90/122 (73%), Positives = 107/122 (87%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVA+ILE +YEQLQQ S+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
           gi|482557570|gb|EOA21762.1| hypothetical protein
           CARUB_v10002229mg [Capsella rubella]
          Length = 138

 Score =  187 bits (474), Expect = 2e-45
 Identities = 89/122 (72%), Positives = 106/122 (86%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQ SED  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR  DDD IEKM+NDL ++++
Sbjct: 77  VREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDDAIEKMLNDLSLVKR 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  187 bits (474), Expect = 2e-45
 Identities = 89/122 (72%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQ+S+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 138

 Score =  187 bits (474), Expect = 2e-45
 Identities = 91/122 (74%), Positives = 105/122 (86%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +YEQLQQ S D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K+KGR  DD+ IEKM+ DL MI+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLTDLSMIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]
          Length = 138

 Score =  186 bits (472), Expect = 4e-45
 Identities = 89/122 (72%), Positives = 107/122 (87%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +YEQLQQT++D  +Q S VFEKS QYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVALILEHKYEQLQQTADDPMNQMSQVFEKSHQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA +MVPS+K+KGR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEAISMVPSIKAKGRALDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
          Length = 138

 Score =  186 bits (472), Expect = 4e-45
 Identities = 90/122 (73%), Positives = 106/122 (86%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +Y+QLQQ S+D  +Q S VFEKSLQYVK+FS YKNPDAVKQ
Sbjct: 17  EFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQYVKRFSRYKNPDAVKQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY L EFELCVLGNLCP+T+EEA AMVPS+K+KGR  DDD I+KM+NDL +I+K
Sbjct: 77  VREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHDDDAIDKMLNDLALIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum]
          Length = 138

 Score =  186 bits (471), Expect = 5e-45
 Identities = 88/122 (72%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LIL+ +YEQLQQ+S+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+K++GR  DD+ IEKM+NDL +I+K
Sbjct: 77  VREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|XP_004141497.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Cucumis sativus]
          Length = 138

 Score =  184 bits (468), Expect = 1e-44
 Identities = 88/122 (72%), Positives = 108/122 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE +YEQLQQ +ED ++Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L RY LAEFELCVLGNLCP+T+EEA ++VPSLK+KGR  +D+ IEKM+NDL +I+K
Sbjct: 77  VREILSRYQLAEFELCVLGNLCPETVEEATSIVPSLKTKGRVHEDEAIEKMLNDLSLIKK 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
           gi|255632992|gb|ACU16850.1| unknown [Glycine max]
          Length = 195

 Score =  184 bits (468), Expect = 1e-44
 Identities = 89/119 (74%), Positives = 105/119 (88%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EVALILE +YEQLQQTS+D  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIR 243
           VR++L RY LAEFELCVLGNLCP+T+EEA AMVPS+KS+GR  DD+ IEKM+NDL +I+
Sbjct: 77  VREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDLSLIK 135


>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
           gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 138

 Score =  184 bits (466), Expect = 2e-44
 Identities = 87/122 (71%), Positives = 106/122 (86%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE ++EQLQQ SED  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR  DD+ IEKM+NDL ++++
Sbjct: 77  VREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDLSLVKR 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138


>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
           Full=DNA-directed RNA polymerase II subunit 4; AltName:
           Full=15.9 kDa subunit of RNA polymerase II; AltName:
           Full=DNA-directed RNA polymerase II subunit D
           gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
           polymerase II [Arabidopsis thaliana]
           gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
           thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
           [Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
           polymerase II, Rpb4, core protein [Arabidopsis thaliana]
          Length = 138

 Score =  183 bits (465), Expect = 3e-44
 Identities = 87/122 (71%), Positives = 106/122 (86%)
 Frame = -1

Query: 599 EFLKARCLMNSEVALILERRYEQLQQTSEDASSQTSLVFEKSLQYVKQFSHYKNPDAVKQ 420
           EFLKA+CLMN EV+LILE ++EQLQQ SED  +Q S VFEKSLQYVK+FS YKNPDAV+Q
Sbjct: 17  EFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQ 76

Query: 419 VRDVLCRYGLAEFELCVLGNLCPDTLEEAKAMVPSLKSKGRGFDDDKIEKMINDLQMIRK 240
           VR++L R+ L EFELCVLGNLCP+T+EEA AMVPSLK+KGR  DD+ IEKM+NDL ++++
Sbjct: 77  VREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDLSLVKR 136

Query: 239 FE 234
           FE
Sbjct: 137 FE 138