BLASTX nr result

ID: Ephedra25_contig00012065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012065
         (656 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22093.1| unknown [Picea sitchensis]                              65   2e-08
gb|AFW62831.1| putative protein kinase superfamily protein [Zea ...    57   5e-06

>gb|ABK22093.1| unknown [Picea sitchensis]
          Length = 179

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/121 (38%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
 Frame = -2

Query: 343 ENPRKRRKFASPWDVPPTQFKNCNEXXXXXXXXXXXSWDVPPLLLQFHCDFFL---SGVA 173
           ENPRKRRK  S WDV P+Q +                  V P L+    DF +   +G  
Sbjct: 16  ENPRKRRKLTSSWDVLPSQLQ------------------VQPTLIFTGKDFGIGSRNGEG 57

Query: 172 QQYVQSAFTSTCSIPESQ----KAPEKQNEQRCSRDVSPPLRADDKDGHYTFQIGDNLTP 5
           Q     A     SIP S      +   Q+++  SR  SPP R+DDKDGHY F+IG+NLT 
Sbjct: 58  QNAPLLAGAGV-SIPASDCSRSTSSNIQSKEEGSRSGSPPWRSDDKDGHYMFEIGENLTS 116

Query: 4   R 2
           R
Sbjct: 117 R 117


>gb|AFW62831.1| putative protein kinase superfamily protein [Zea mays]
          Length = 389

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 42/112 (37%), Positives = 50/112 (44%)
 Frame = -2

Query: 337 PRKRRKFASPWDVPPTQFKNCNEXXXXXXXXXXXSWDVPPLLLQFHCDFFLSGVAQQYVQ 158
           PRKR++    WDV P +                  WDV P  +     F L G   Q V 
Sbjct: 16  PRKRQRLG--WDVVPAEMYQVTRPRLG--------WDVGPAEMN---QFALCG---QEVV 59

Query: 157 SAFTSTCSIPESQKAPEKQNEQRCSRDVSPPLRADDKDGHYTFQIGDNLTPR 2
           +AF S   +  S      Q  Q    D SPPLR DDK+GHY F +GDNLT R
Sbjct: 60  NAF-SAAVLGLSSGCVSSQVNQEQPHDGSPPLREDDKNGHYVFAVGDNLTSR 110


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