BLASTX nr result

ID: Ephedra25_contig00012026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012026
         (542 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849403.1| hypothetical protein AMTR_s00160p00062470 [A...    92   6e-17
gb|ABR16271.1| unknown [Picea sitchensis]                              89   7e-16
ref|XP_006849401.1| hypothetical protein AMTR_s00160p00061390 [A...    85   1e-14
gb|ABK22844.1| unknown [Picea sitchensis]                              60   3e-07
gb|ABK26852.1| unknown [Picea sitchensis]                              57   2e-06
gb|ABK26127.1| unknown [Picea sitchensis]                              55   8e-06

>ref|XP_006849403.1| hypothetical protein AMTR_s00160p00062470 [Amborella trichopoda]
           gi|548852964|gb|ERN10984.1| hypothetical protein
           AMTR_s00160p00062470 [Amborella trichopoda]
          Length = 316

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
 Frame = +3

Query: 18  VENCLQMSLPEGADRGYFIMDPKVPDVTEVKLPPTFAVGGGLDIFTDRHVEFCHALEDAG 197
           V+   +M+LP G D+ YF+++P+VP V E +LPP   V GG D+F DR VEFC  +E  G
Sbjct: 209 VDATARMALPPGEDKNYFMLNPRVPPVAETRLPPCLVVVGGKDLFRDRQVEFCEKMEGMG 268

Query: 198 QAIEFVVYEDMGH---FSTD-ETSPDAVDERRRTADFIRLVCGG 317
           Q +E V YE+M H   F  D E SP+A D   +T  F+   CGG
Sbjct: 269 QMVEVVWYEEMRHCFMFEEDTENSPEADDMVEKTVSFMER-CGG 311


>gb|ABR16271.1| unknown [Picea sitchensis]
          Length = 342

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = +3

Query: 12  DIVENCLQMSLPEGADRGYFIMDPKVPDVTEVKLPPTFAVGGGLDIFTDRHVEFCHALED 191
           DI++    M+LPEG ++ Y+I +P +PDV++V LPP     G LD F DR VEFC A+E 
Sbjct: 226 DIMDQVSIMALPEGTNKNYYIFNPWIPDVSQVVLPPALITIGKLDKFYDRSVEFCRAMEA 285

Query: 192 AGQAIEFVVYEDMGH----FSTDETSPDAVDERRRTADFI 299
           AGQ +E V Y +MGH        E+ P+A+D+ ++  +F+
Sbjct: 286 AGQDLEMVEYANMGHCFHLMPNFESCPEALDQSQKVVNFM 325


>ref|XP_006849401.1| hypothetical protein AMTR_s00160p00061390 [Amborella trichopoda]
           gi|548852962|gb|ERN10982.1| hypothetical protein
           AMTR_s00160p00061390 [Amborella trichopoda]
          Length = 136

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +3

Query: 9   LDIVENCLQMSLPEGADRGYFIMDPKVPDVTEVKLPPTFAVGGGLDIFTDRHVEFCHALE 188
           L +V++  +M++P G D+ YF+++P VP   EV+LPP   V GG D+F DR  EFC  +E
Sbjct: 26  LALVDSKARMAVPPGEDKNYFVLNPSVPPAAEVRLPPCLVVVGGKDLFRDREFEFCEKME 85

Query: 189 DAGQAIEFVVYEDMGHF----STDETSPDAVDERRRTADFI 299
           + GQ +E V Y+ MGH        E   +AVD   +   F+
Sbjct: 86  EMGQMLEVVSYDQMGHCFIIGEEGENCAEAVDLVEKVVSFM 126


>gb|ABK22844.1| unknown [Picea sitchensis]
          Length = 319

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
 Frame = +3

Query: 3   MSLDIVENCLQMSLPEGADRGYFIMDPKVPD---VTEVKLPPTFAVGGGLDIFTDRHVEF 173
           ++L++ +   ++SLP GA+R + I +P  P    ++ V LPP   V GG D+  DR +E+
Sbjct: 212 LNLELNDRFWRLSLPVGANRDHPICNPLAPGAPCLSNVALPPVLVVAGGRDLLRDREIEY 271

Query: 174 CHALEDAGQAIEFVVYEDMGH--FSTDETSPDAVDERRRTADFIR 302
              L+ +G+ +E  V+E+  H  F+    SP +     R   F++
Sbjct: 272 AEVLKSSGKEVELAVFEEEEHGFFTLTPNSPASGRLMERIIQFMK 316


>gb|ABK26852.1| unknown [Picea sitchensis]
          Length = 327

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   MSLDIVENCLQMSLPEGADRGY---FIMDPKVPDVTEVKLPPTFAVGGGLDIFTDRHVEF 173
           ++L++ + C ++SLP G+DR +   +   P  P + ++ LPP     GG D+  DR  E+
Sbjct: 218 LNLELSDACWRLSLPVGSDRDHPFSYPCSPAAPKLEKISLPPLLVAIGGRDMLRDRDHEY 277

Query: 174 CHALEDAGQAIEFVVYEDMGH 236
           C  L+  G+++E VV+ +  H
Sbjct: 278 CELLKQHGKSVEVVVFGEEEH 298


>gb|ABK26127.1| unknown [Picea sitchensis]
          Length = 351

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   MSLDIVENCLQMSLPEGADRGYFIMDP---KVPDVTEVKLPPTFAVGGGLDIFTDRHVEF 173
           +SL + +   ++SLP G+DR +   +P   + P + E  LPP     GG D+  DR  ++
Sbjct: 232 LSLQLSDAGWRLSLPVGSDRDHPFSNPWSPEAPKLEEAPLPPLLVAIGGRDMLRDRGHDY 291

Query: 174 CHALEDAGQAIEFVVYEDMGH 236
           C +L+  G+++E VV+E+  H
Sbjct: 292 CESLKQCGKSVEVVVFEEEEH 312


Top