BLASTX nr result
ID: Ephedra25_contig00012003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012003
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006487037.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 96 4e-18
ref|XP_006487036.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 96 4e-18
ref|XP_006422977.1| hypothetical protein CICLE_v10027715mg [Citr... 96 4e-18
ref|XP_006422976.1| hypothetical protein CICLE_v10027715mg [Citr... 96 4e-18
ref|XP_002298731.2| zinc finger family protein [Populus trichoca... 96 8e-18
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH... 95 1e-17
emb|CBI32382.3| unnamed protein product [Vitis vinifera] 95 1e-17
emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera] 95 1e-17
ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 94 2e-17
gb|EOX98308.1| RING/U-box superfamily protein isoform 4 [Theobro... 94 3e-17
gb|EOX98306.1| RING/U-box domain-containing protein isoform 1 [T... 94 3e-17
ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis] gi... 93 4e-17
ref|XP_006850515.1| hypothetical protein AMTR_s00035p00240580 [A... 93 5e-17
gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus pe... 93 5e-17
ref|XP_006657173.1| PREDICTED: probable E3 ubiquitin ligase SUD1... 92 6e-17
gb|EMT28890.1| hypothetical protein F775_07189 [Aegilops tauschii] 92 6e-17
gb|EMS59192.1| hypothetical protein TRIUR3_04860 [Triticum urartu] 92 6e-17
dbj|BAD37529.1| zinc finger (C3HC4-type RING finger)protein-like... 92 6e-17
ref|XP_003563290.1| PREDICTED: E3 ubiquitin-protein ligase MARCH... 92 6e-17
dbj|BAJ93994.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 6e-17
>ref|XP_006487037.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X2 [Citrus
sinensis]
Length = 1122
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGED 406
VYRFAWLGCL +LW C KRF +WF NLHNSIRDDRYLIGRRLHN+GED
Sbjct: 1032 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGED 1081
>ref|XP_006487036.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like isoform X1 [Citrus
sinensis]
Length = 1123
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGED 406
VYRFAWLGCL +LW C KRF +WF NLHNSIRDDRYLIGRRLHN+GED
Sbjct: 1033 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGED 1082
>ref|XP_006422977.1| hypothetical protein CICLE_v10027715mg [Citrus clementina]
gi|557524911|gb|ESR36217.1| hypothetical protein
CICLE_v10027715mg [Citrus clementina]
Length = 1043
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGED 406
VYRFAWLGCL +LW C KRF +WF NLHNSIRDDRYLIGRRLHN+GED
Sbjct: 953 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGED 1002
>ref|XP_006422976.1| hypothetical protein CICLE_v10027715mg [Citrus clementina]
gi|557524910|gb|ESR36216.1| hypothetical protein
CICLE_v10027715mg [Citrus clementina]
Length = 1112
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGED 406
VYRFAWLGCL +LW C KRF +WF NLHNSIRDDRYLIGRRLHN+GED
Sbjct: 1022 VYRFAWLGCLCFSVLWFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGED 1071
>ref|XP_002298731.2| zinc finger family protein [Populus trichocarpa]
gi|550348609|gb|EEE83536.2| zinc finger family protein
[Populus trichocarpa]
Length = 1088
Score = 95.5 bits (236), Expect = 8e-18
Identities = 50/92 (54%), Positives = 55/92 (59%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQXXXXXX 376
VYRFAWLGCL LL C KRF +WF NLHNSIRDDRYLIGR+LHNYGED
Sbjct: 997 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRKLHNYGED---------- 1046
Query: 375 XXXXXXXLDTQTGHPENESGSSSEQADNIGEQ 280
G +NE+G+SSE A N Q
Sbjct: 1047 -----------LGEEQNEAGTSSE-AQNSNSQ 1066
>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
Length = 1195
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQ 394
VYRFAWLGCL LL C KRF +WF NLHNSIRDDRYLIGRRLHNYGED+ +
Sbjct: 1100 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGK 1153
>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
Length = 1110
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQ 394
VYRFAWLGCL LL C KRF +WF NLHNSIRDDRYLIGRRLHNYGED+ +
Sbjct: 1015 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGK 1068
>emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]
Length = 1177
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQ 394
VYRFAWLGCL LL C KRF +WF NLHNSIRDDRYLIGRRLHNYGED+ +
Sbjct: 1082 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDTEGK 1135
>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
gi|449495626|ref|XP_004159898.1| PREDICTED: E3
ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
Length = 1098
Score = 94.0 bits (232), Expect = 2e-17
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAW+GCL + +L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 1009 VYRFAWIGCLCVSVLYFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 1059
>gb|EOX98308.1| RING/U-box superfamily protein isoform 4 [Theobroma cacao]
Length = 831
Score = 93.6 bits (231), Expect = 3e-17
Identities = 41/51 (80%), Positives = 42/51 (82%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L C KRF +WF NLHNSIRDDRYLIGRRLHNYGEDS
Sbjct: 741 VYRFAWLGCLGFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDS 791
>gb|EOX98306.1| RING/U-box domain-containing protein isoform 1 [Theobroma cacao]
Length = 1121
Score = 93.6 bits (231), Expect = 3e-17
Identities = 41/51 (80%), Positives = 42/51 (82%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L C KRF +WF NLHNSIRDDRYLIGRRLHNYGEDS
Sbjct: 1031 VYRFAWLGCLGFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGEDS 1081
>ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis]
gi|223542111|gb|EEF43655.1| ssm4 protein, putative
[Ricinus communis]
Length = 214
Score = 93.2 bits (230), Expect = 4e-17
Identities = 46/84 (54%), Positives = 52/84 (61%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQXXXXXX 376
VYRFAWLGCL +L C KRF +WF NLHNSIRDDRYLIGRRLHN+GED +
Sbjct: 119 VYRFAWLGCLCFSVLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDKEER------ 172
Query: 375 XXXXXXXLDTQTGHPENESGSSSE 304
ENE+G+SSE
Sbjct: 173 ---------------ENEAGTSSE 181
>ref|XP_006850515.1| hypothetical protein AMTR_s00035p00240580 [Amborella trichopoda]
gi|548854161|gb|ERN12096.1| hypothetical protein
AMTR_s00035p00240580 [Amborella trichopoda]
Length = 1096
Score = 92.8 bits (229), Expect = 5e-17
Identities = 39/51 (76%), Positives = 45/51 (88%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAW+GCL L LL C++RF +WF NLHNSIRDDRYLIGRRLHN+GED+
Sbjct: 1002 VYRFAWVGCLCLALLCFCIRRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDA 1052
>gb|EMJ01524.1| hypothetical protein PRUPE_ppa000536mg [Prunus persica]
Length = 1109
Score = 92.8 bits (229), Expect = 5e-17
Identities = 49/93 (52%), Positives = 54/93 (58%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDSSAQXXXXXX 376
VYRFAWLGCL LL C KRF +WF NLHNSIRDDRYLIGRRLHN+GE
Sbjct: 1015 VYRFAWLGCLCFSLLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE----------- 1063
Query: 375 XXXXXXXLDTQTGHPENESGSSSEQADNIGEQS 277
+NESG+SSE D+ E S
Sbjct: 1064 ----------AIVEKQNESGTSSEMQDSNFEAS 1086
>ref|XP_006657173.1| PREDICTED: probable E3 ubiquitin ligase SUD1-like, partial [Oryza
brachyantha]
Length = 1060
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 961 VYRFAWLGCLIFSALFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 1011
>gb|EMT28890.1| hypothetical protein F775_07189 [Aegilops tauschii]
Length = 938
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 840 VYRFAWLGCLIFSTLFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 890
>gb|EMS59192.1| hypothetical protein TRIUR3_04860 [Triticum urartu]
Length = 927
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 829 VYRFAWLGCLIFSTLFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 879
>dbj|BAD37529.1| zinc finger (C3HC4-type RING finger)protein-like [Oryza sativa
Japonica Group] gi|51536350|dbj|BAD37481.1| zinc finger
(C3HC4-type RING finger)protein-like [Oryza sativa
Japonica Group]
Length = 681
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 583 VYRFAWLGCLIFSALFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 633
>ref|XP_003563290.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Brachypodium
distachyon]
Length = 1098
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 1001 VYRFAWLGCLIFSTLFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 1051
>dbj|BAJ93994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1097
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -1
Query: 555 VYRFAWLGCLTLGLLWHCMKRFQLWFMNLHNSIRDDRYLIGRRLHNYGEDS 403
VYRFAWLGCL L+ C KRF +WF NLHNSIRDDRYLIGRRLHN+GEDS
Sbjct: 996 VYRFAWLGCLIFSTLFFCGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDS 1046