BLASTX nr result
ID: Ephedra25_contig00011977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00011977
(477 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [A... 165 7e-39
emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera] 164 1e-38
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261... 163 3e-38
emb|CBI23720.3| unnamed protein product [Vitis vinifera] 163 3e-38
gb|EOY06191.1| RNA-binding family protein [Theobroma cacao] 152 3e-35
ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 152 4e-35
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 152 4e-35
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 152 6e-35
gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlise... 151 1e-34
ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [S... 151 1e-34
emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. m... 150 1e-34
ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 150 2e-34
gb|ADE77701.1| unknown [Picea sitchensis] 150 2e-34
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 149 3e-34
ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 149 4e-34
ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycin... 149 4e-34
ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citr... 149 5e-34
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 149 5e-34
ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 148 6e-34
emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulga... 148 6e-34
>ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [Amborella trichopoda]
gi|548841480|gb|ERN01543.1| hypothetical protein
AMTR_s00002p00271280 [Amborella trichopoda]
Length = 288
Score = 165 bits (417), Expect = 7e-39
Identities = 82/143 (57%), Positives = 107/143 (74%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 IVKEGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
I +E G G+ E ++LY GNLPY CDSA+LAGI+Q +GS E+VEVL+DRNTG SRG
Sbjct: 100 IEEESGGGGEISSDES-TKLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLYDRNTGKSRG 158
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 400
F F TM+S++DANAVI+NLDGS+YGGR L+VNF DKPK +E Y++FVGNLSW++
Sbjct: 159 FAFVTMSSVEDANAVIQNLDGSEYGGRILKVNFRDKPKAKEPLYPETEYKLFVGNLSWSV 218
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
TSE + +IF + ARV++D
Sbjct: 219 TSESLSQIFGEYGNVVGARVLYD 241
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S L+ I +G+V VL+D TG SRG+GF
Sbjct: 196 KAKEPLYPETEYKLFVGNLSWSVTSESLSQIFGEYGNVVGARVLYDGETGKSRGYGFVCY 255
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVN 328
++ + +++LDG GR +RV+
Sbjct: 256 STKSEMETALQSLDGMDLEGRPIRVS 281
>emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 164 bits (415), Expect = 1e-38
Identities = 82/143 (57%), Positives = 105/143 (73%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 IVKEGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
+++E G E K LY GNLPY+CDSA LAGIIQN+GS E+VEVL+DR+TG SRG
Sbjct: 54 VLREEGAESPVNTK-----LYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRG 108
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNL 400
F F TM+S++D NAVIENLDGS+YGGRTLRVNF DKPK + Y++FVGNLSW++
Sbjct: 109 FAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSV 168
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
TSE + ++F + ARV++D
Sbjct: 169 TSESLNQVFQEYGNVIGARVLYD 191
>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 163 bits (412), Expect = 3e-38
Identities = 81/143 (56%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 IVKEGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
+++E G E K LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRG
Sbjct: 99 VLREEGAESPVNTK-----LYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRG 153
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNL 400
F F TM+S++D NAVIENLDGS+YGGRTLRVNF DKPK + Y++FVGNLSW++
Sbjct: 154 FAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSV 213
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
TSE + ++F + ARV++D
Sbjct: 214 TSESLNQVFQEYGNVIGARVLYD 236
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +2
Query: 107 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 286
+L+VGNL ++ S L + Q +G+V VL+D TG SRG+GF ++ + + +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262
Query: 287 LDGSQYGGRTLRV 325
L+G + GR +RV
Sbjct: 263 LNGVELEGRAIRV 275
>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 163 bits (412), Expect = 3e-38
Identities = 81/143 (56%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 IVKEGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
+++E G E K LY GNLPY+CDSA+LAGIIQN+GS E+VEVL++R+TG SRG
Sbjct: 99 VLREEGAESPVNTK-----LYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRG 153
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNL 400
F F TM+S++D NAVIENLDGS+YGGRTLRVNF DKPK + Y++FVGNLSW++
Sbjct: 154 FAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSV 213
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
TSE + ++F + ARV++D
Sbjct: 214 TSESLNQVFQEYGNVIGARVLYD 236
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/74 (35%), Positives = 46/74 (62%)
Frame = +2
Query: 107 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 286
+L+VGNL ++ S L + Q +G+V VL+D TG SRG+GF ++ + + +E+
Sbjct: 203 KLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALES 262
Query: 287 LDGSQYGGRTLRVN 328
L+G + GR +R++
Sbjct: 263 LNGVELEGRAIRIS 276
>gb|EOY06191.1| RNA-binding family protein [Theobroma cacao]
Length = 293
Score = 152 bits (385), Expect = 3e-35
Identities = 74/126 (58%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 283
++LY GNLPYN DSA+LAGIIQ +GS E+VEVL+DR TG SRGF F TM++++D N VIE
Sbjct: 121 TKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIE 180
Query: 284 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTQSKPLS 451
NLDGS+Y GRTLRVNF DKP+ RE +++FVGNLSW++TSE + + F +
Sbjct: 181 NLDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVG 240
Query: 452 ARVVFD 469
ARV++D
Sbjct: 241 ARVLYD 246
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +2
Query: 86 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
+ +EPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF +
Sbjct: 201 RPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVGARVLYDGETGRSRGYGFVSY 260
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVN 328
++ + A +++L+G + GR +RV+
Sbjct: 261 STKSEMEAALQSLNGVELEGRAIRVS 286
>ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449487476|ref|XP_004157645.1| PREDICTED: 28
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 152 bits (384), Expect = 4e-35
Identities = 75/143 (52%), Positives = 102/143 (71%), Gaps = 4/143 (2%)
Frame = +2
Query: 53 IVKEGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
+ +E VEG + + ++LY GNLPY+ DS++LA I+Q++G E++EVL+DRNTG SRG
Sbjct: 85 VEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRG 144
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNL 400
F F TM+SI+D N VIENLDGS Y GR LRVNF DKPK +E Y++FVGNLSW++
Sbjct: 145 FAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSV 204
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
TSE + + F + ARV++D
Sbjct: 205 TSEILTQAFQEYGNVVGARVIYD 227
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S L Q +G+V V++D TG SRG+GF +
Sbjct: 182 KPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSY 241
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPD 337
++ + +E ++ + GR +RV+ +
Sbjct: 242 STKSEMETALETINELELEGRVIRVSLAE 270
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 152 bits (384), Expect = 4e-35
Identities = 77/145 (53%), Positives = 108/145 (74%), Gaps = 6/145 (4%)
Frame = +2
Query: 53 IVKEGGVEGDNK-DKEPLS-RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVS 226
+ +EG E + + + P++ +LY GNLPYN DSA+LAGIIQ++G+ E+VEVL+DR+TG S
Sbjct: 94 VAEEGEAEPEAEPEAAPINTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRS 153
Query: 227 RGFGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSW 394
RGF F TM++++D NAVIENLDGSQ+ GR LRVNF DKPK +E +++FVGNLSW
Sbjct: 154 RGFAFVTMSTVEDCNAVIENLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSW 213
Query: 395 NLTSERMLRIFSTQSKPLSARVVFD 469
++TSE ++ F + ARV++D
Sbjct: 214 SVTSESLVEAFQEYGNIVGARVLYD 238
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +2
Query: 86 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S L Q +G++ VL+D TG SRG+GF
Sbjct: 193 KPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCY 252
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 346
+ + + +L+G + GR +RV+ K
Sbjct: 253 ATRSEMENALVSLNGVELEGRAMRVSLAQGKK 284
>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Solanum tuberosum]
Length = 278
Score = 152 bits (383), Expect = 6e-35
Identities = 71/138 (51%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Frame = +2
Query: 68 GVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 247
G +G ++ + ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 94 GFDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 153
Query: 248 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 415
M+S++D V+ENLDG +YGGRTLRVNF DKPK +E +++FVGNL+W+++SE +
Sbjct: 154 MSSLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 213
Query: 416 LRIFSTQSKPLSARVVFD 469
+ F + ARV++D
Sbjct: 214 AQAFQEYGAVVGARVLYD 231
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = +2
Query: 86 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S LA Q +G+V VL+D TG SRG+GF +
Sbjct: 186 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGAVVGARVLYDGETGRSRGYGFVSF 245
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 349
+ ++ + NL+G + GR LRV+ + KQ
Sbjct: 246 ETREEMENALNNLNGVELDGRALRVSLAEGKKQ 278
>gb|EPS60926.1| hypothetical protein M569_13875, partial [Genlisea aurea]
Length = 184
Score = 151 bits (381), Expect = 1e-34
Identities = 70/126 (55%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 283
++LY GNLPYNCDSA+LAGIIQ++ S E++EVL+DRNTG SRGF F TM+S+++ N VI+
Sbjct: 12 TKLYFGNLPYNCDSAQLAGIIQDYASPELIEVLYDRNTGRSRGFAFVTMSSVEECNTVIQ 71
Query: 284 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTQSKPLS 451
NLDGS++GGR +RVNF ++PK +E Y++FVGNLSW++TSE + F +
Sbjct: 72 NLDGSEFGGRIMRVNFSNQPKPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVG 131
Query: 452 ARVVFD 469
ARV++D
Sbjct: 132 ARVLYD 137
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF +
Sbjct: 92 KPKEPLYPETDYKLFVGNLSWSVTSESLREAFQQYGTVVGARVLYDGETGRSRGYGFVSY 151
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 349
+ A ++ LDG++ GR +R++ KQ
Sbjct: 152 DTKTAMEAALKTLDGAELEGRAIRISLAQGKKQ 184
>ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein
SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 151 bits (381), Expect = 1e-34
Identities = 75/147 (51%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 65 GGVEGDNKDKEP--------LSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTG 220
G VEG ++D P ++LY GNLPYNCDSA+LAGI+Q + S E+VEVL+DR TG
Sbjct: 103 GAVEGSSQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITG 162
Query: 221 VSRGFGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNL 388
SRGF F TMT+++D VI+NLDGS YGGRT++VNF D+PK + +++FVGNL
Sbjct: 163 RSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKLPLYPETEHKLFVGNL 222
Query: 389 SWNLTSERMLRIFSTQSKPLSARVVFD 469
SW +TSE + F + ARV++D
Sbjct: 223 SWTVTSEMLTEAFGRCGNVVGARVLYD 249
>emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 150 bits (380), Expect = 1e-34
Identities = 75/146 (51%), Positives = 103/146 (70%), Gaps = 9/146 (6%)
Frame = +2
Query: 59 KEGGVEGDN-----KDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGV 223
+EG E +N +++ ++LY GNLPY+ DSA+LAG+I+ +GS E+VEVL+DR+TG
Sbjct: 97 EEGQGEKENGEEIVAEEDTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGK 156
Query: 224 SRGFGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLS 391
SRGF FATMT ++D AVIENLDG ++ GRTLRVNF DKPK +E Y++F+GNLS
Sbjct: 157 SRGFAFATMTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKESLYPETEYKLFIGNLS 216
Query: 392 WNLTSERMLRIFSTQSKPLSARVVFD 469
W +TSE + F + ARV++D
Sbjct: 217 WKVTSEILTEAFQEHGTVVGARVIYD 242
>ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 281
Score = 150 bits (379), Expect = 2e-34
Identities = 70/138 (50%), Positives = 102/138 (73%), Gaps = 4/138 (2%)
Frame = +2
Query: 68 GVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFAT 247
G +G ++ + ++LY GNLPY CDSA+LAGI+Q++ S E+VEVL+DR+TG SRGF F T
Sbjct: 97 GSDGSSESEGVNTKLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVT 156
Query: 248 MTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERM 415
M++++D V+ENLDG +YGGRTLRVNF DKPK +E +++FVGNL+W+++SE +
Sbjct: 157 MSTLEDCKTVVENLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESL 216
Query: 416 LRIFSTQSKPLSARVVFD 469
+ F + ARV++D
Sbjct: 217 AQAFQEYGTVVGARVLYD 234
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = +2
Query: 86 KDKEPL-----SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S LA Q +G+V VL+D TG SRG+GF +
Sbjct: 189 KPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGTVVGARVLYDGETGRSRGYGFVSF 248
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQ 349
+ ++ + NL+G + GR LRV+ KQ
Sbjct: 249 ETREEMENALNNLNGVELDGRALRVSLAQGKKQ 281
>gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 150 bits (379), Expect = 2e-34
Identities = 80/161 (49%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Frame = +2
Query: 59 KEGGVEGDNKDKEPL------SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTG 220
K G E + EPL +++Y+GNLP++CDSAELAGIIQ GSVE+VEV++D+NTG
Sbjct: 90 KSGEEEDAPEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTG 149
Query: 221 VSRGFGFATMTSIKDANAVIENLDGSQYGGRT------------LRVNFPDKPKQRERN- 361
SRGF FATM+S++DANA++ENLDGSQYGGRT LRVN DK + +RN
Sbjct: 150 RSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSRSEQRNQ 209
Query: 362 -----LYEVFVGNLSWNLTSERMLRIFSTQSKPLSARVVFD 469
+ V++GNLSW++ E + +FS L A++VFD
Sbjct: 210 TNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFD 250
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/74 (36%), Positives = 47/74 (63%)
Frame = +2
Query: 107 RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIEN 286
R+Y+GNL ++ + L + G++ +++FDR TG SRGFGF T ++ +A A + +
Sbjct: 217 RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVAS 276
Query: 287 LDGSQYGGRTLRVN 328
L+G + GR +RV+
Sbjct: 277 LNGKELEGRAMRVD 290
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 149 bits (377), Expect = 3e-34
Identities = 75/139 (53%), Positives = 97/139 (69%), Gaps = 4/139 (2%)
Frame = +2
Query: 65 GGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFA 244
G EG+ ++LY GNLPYN DSA+LAG+IQ +G+ E+VEVL+ R TG SRGF F
Sbjct: 94 GETEGEADQVPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFV 153
Query: 245 TMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSER 412
TM+SI+D VIENLDGSQY GR LRVNF DKPK +E Y++F+GNLSW++TSE
Sbjct: 154 TMSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSES 213
Query: 413 MLRIFSTQSKPLSARVVFD 469
+ + F + ARV++D
Sbjct: 214 LTQAFQEYGNVVGARVLYD 232
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L++GNL ++ S L Q +G+V VL+D TG SRG+GF
Sbjct: 187 KPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCY 246
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 346
++ ++ +++L+G + GR LRV+ + K
Sbjct: 247 STKEELETALQSLNGVELEGRALRVSLAEGRK 278
>ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 149 bits (376), Expect = 4e-34
Identities = 71/126 (56%), Positives = 95/126 (75%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDANAVIE 283
++LY GNLPY+ DSA+LAGIIQ++ S E++EVL+ R+TG SRGF F TM+S++D NAVIE
Sbjct: 125 TKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDCNAVIE 184
Query: 284 NLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTQSKPLS 451
NLDG +Y GRTLRVNF DKP+ +E Y++FVGNLSW+ TSE + + F +
Sbjct: 185 NLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVG 244
Query: 452 ARVVFD 469
ARV++D
Sbjct: 245 ARVLYD 250
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +2
Query: 92 KEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTS 256
KEPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF ++
Sbjct: 207 KEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVGARVLYDGETGRSRGYGFVCFST 266
Query: 257 IKDANAVIENLDGSQYGGRTLRVNFPD 337
+ +++LDG + GR +RV+ +
Sbjct: 267 KAEMETALQSLDGVELEGRAMRVSLAE 293
>ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 149 bits (376), Expect = 4e-34
Identities = 73/140 (52%), Positives = 100/140 (71%), Gaps = 4/140 (2%)
Frame = +2
Query: 62 EGGVEGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGF 241
EG V + ++LY GNLPY+ DSA+LAG+IQ+FGS E++EVL+DR+TG SRGF F
Sbjct: 103 EGEVVAEQDSDSSATKLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAF 162
Query: 242 ATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSE 409
TM+ I+D NAVIENLDG ++ GRTLRVNF KPK +E +++FVGNLSW++T+E
Sbjct: 163 VTMSCIEDCNAVIENLDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNE 222
Query: 410 RMLRIFSTQSKPLSARVVFD 469
+ + F + ARV++D
Sbjct: 223 ILTQAFQEYGTVVGARVLYD 242
>ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citrus clementina]
gi|557522218|gb|ESR33585.1| hypothetical protein
CICLE_v10005487mg [Citrus clementina]
Length = 309
Score = 149 bits (375), Expect = 5e-34
Identities = 76/143 (53%), Positives = 101/143 (70%), Gaps = 7/143 (4%)
Frame = +2
Query: 62 EGGVEGDNKDKEPL---SRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRG 232
E G E + PL ++LY GNLPYN DSA+LAGIIQ++GS E+VEVL+DR TG SRG
Sbjct: 120 EAGPEAEALAPPPLGVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRG 179
Query: 233 FGFATMTSIKDANAVIENLDGSQYGGRTLRVNFPDKPKQR----ERNLYEVFVGNLSWNL 400
F F TM++++D NAVIENLDG +Y GR LRVNF DKPK + +++FVGNLSW++
Sbjct: 180 FAFVTMSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSV 239
Query: 401 TSERMLRIFSTQSKPLSARVVFD 469
T+E + + F + ARV++D
Sbjct: 240 TTESLTQAFQEYGNVVGARVLYD 262
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 149 bits (375), Expect = 5e-34
Identities = 76/136 (55%), Positives = 96/136 (70%), Gaps = 4/136 (2%)
Frame = +2
Query: 74 EGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMT 253
+G+ + ++LY GNLPYN DSA+LAGIIQ +GS E+VEVL+ R TG SRGF F TM+
Sbjct: 97 KGETNEIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMS 156
Query: 254 SIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLR 421
SI+D NAVIENLD SQY GR LRVNF D PK +E Y++FVGNLSW+ TSE + +
Sbjct: 157 SIEDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESLTQ 216
Query: 422 IFSTQSKPLSARVVFD 469
F + ARV++D
Sbjct: 217 AFQEYGNVVGARVLYD 232
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL ++ S L Q +G+V VL+D TG SRG+GF
Sbjct: 187 KPKEPLYPETEYKLFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCY 246
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVNFPDKPK 346
++ + + +LDG + GR LRV+ + K
Sbjct: 247 STKAEMQTALVSLDGVELEGRALRVSLAEGRK 278
>ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 371
Score = 148 bits (374), Expect = 6e-34
Identities = 70/131 (53%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
Frame = +2
Query: 89 DKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMTSIKDA 268
+++ ++LY GNLPY+ DSA+LAG+I+++GS E++EVL+DR+TG SRGF F TM+ I+D
Sbjct: 195 EEDTRTKLYFGNLPYSVDSAQLAGLIEDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDC 254
Query: 269 NAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLRIFSTQ 436
AVIENLDG+++ GRTLRVNF DKPK +E Y++FVGNLSW +TSE + + F
Sbjct: 255 KAVIENLDGNEFLGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEY 314
Query: 437 SKPLSARVVFD 469
+ ARV++D
Sbjct: 315 GTVVGARVLYD 325
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +2
Query: 86 KDKEPLS-----RLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATM 250
K KEPL +L+VGNL + S L Q +G+V VL+D TG SRG+GF +
Sbjct: 280 KPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEYGTVVGARVLYDGETGKSRGYGFVSY 339
Query: 251 TSIKDANAVIENLDGSQYGGRTLRVN 328
S + A + ++ + GR LRV+
Sbjct: 340 GSKSEMEAALSYMNNVELEGRALRVS 365
>emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
gi|561018539|gb|ESW17343.1| hypothetical protein
PHAVU_007G231600g [Phaseolus vulgaris]
Length = 287
Score = 148 bits (374), Expect = 6e-34
Identities = 72/136 (52%), Positives = 101/136 (74%), Gaps = 4/136 (2%)
Frame = +2
Query: 74 EGDNKDKEPLSRLYVGNLPYNCDSAELAGIIQNFGSVEIVEVLFDRNTGVSRGFGFATMT 253
E D+ + ++LY GNLPY+ DSA+LAG+IQ++GS E++EVL+DR+TG SRGF F TM+
Sbjct: 103 EQDSDESFASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMS 162
Query: 254 SIKDANAVIENLDGSQYGGRTLRVNFPDKPKQRE----RNLYEVFVGNLSWNLTSERMLR 421
I+D NAVIENLDG +Y GRTLRVNF +KPK +E +++FVGNLSW++T+E + +
Sbjct: 163 CIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQ 222
Query: 422 IFSTQSKPLSARVVFD 469
F + ARV++D
Sbjct: 223 AFQEYGTVVGARVLYD 238