BLASTX nr result
ID: Ephedra25_contig00011933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00011933
(505 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23954.3| unnamed protein product [Vitis vinifera] 148 8e-34
ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,... 148 8e-34
ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2,... 147 1e-33
gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlis... 147 2e-33
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc... 145 7e-33
gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [The... 144 9e-33
gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [The... 144 9e-33
gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [The... 144 9e-33
gb|ABR17785.1| unknown [Picea sitchensis] 143 2e-32
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 143 3e-32
ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2,... 142 5e-32
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 142 6e-32
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch... 141 8e-32
gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus pe... 141 8e-32
gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus... 140 1e-31
gb|AFK35529.1| unknown [Lotus japonicus] 140 1e-31
ref|XP_006368050.1| PREDICTED: tryptophan synthase beta chain 2,... 140 2e-31
ref|XP_006366042.1| PREDICTED: tryptophan synthase beta chain 2,... 140 2e-31
ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Popu... 139 3e-31
ref|XP_004248313.1| PREDICTED: tryptophan synthase beta chain 2,... 139 4e-31
>emb|CBI23954.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 148 bits (373), Expect = 8e-34
Identities = 70/77 (90%), Positives = 76/77 (98%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEYHS+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 328 HSFLKDLGRAEYHSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVV 387
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 388 LNCSGRGDKDVHTAIKH 404
>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
vinifera]
Length = 458
Score = 148 bits (373), Expect = 8e-34
Identities = 70/77 (90%), Positives = 76/77 (98%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEYHS+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 379 HSFLKDLGRAEYHSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVV 438
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 439 LNCSGRGDKDVHTAIKH 455
>ref|XP_004294355.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 411
Score = 147 bits (371), Expect = 1e-33
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEYHS+TD EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L DG KVV
Sbjct: 332 HSFLKDLGRAEYHSITDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGAKVV 391
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 392 LNCSGRGDKDVHTAIKH 408
>gb|EPS68191.1| tryptophan synthase beta subunit, partial [Genlisea aurea]
Length = 399
Score = 147 bits (370), Expect = 2e-33
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKDIGRAEY+S+TD EALEAF+RLSRLEGIIPALETSHALAYLE LCPSL DGTKVV
Sbjct: 320 HSFLKDIGRAEYYSITDSEALEAFRRLSRLEGIIPALETSHALAYLETLCPSLPDGTKVV 379
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 380 LNCSGRGDKDVHTAIKH 396
>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
Length = 474
Score = 145 bits (365), Expect = 7e-33
Identities = 69/77 (89%), Positives = 76/77 (98%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+ RAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+LADGT+VV
Sbjct: 395 HSFLKDMKRAEYYSITDEEALEAFRRLSRLEGIIPALETSHALAYLEKLCPTLADGTRVV 454
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 455 LNCSGRGDKDVHTAIKH 471
>gb|EOY12487.1| Tryptophan synthase beta-subunit 2 isoform 3 [Theobroma cacao]
Length = 467
Score = 144 bits (364), Expect = 9e-33
Identities = 69/77 (89%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD GRAEY+SVTD+EALEAF+RLS+LEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 388 HSFLKDAGRAEYYSVTDEEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPDGTKVV 447
Query: 183 LNCSGRGDKDVHTAIKH 233
+NCSGRGDKDVHTAIKH
Sbjct: 448 INCSGRGDKDVHTAIKH 464
>gb|EOY12486.1| Tryptophan synthase beta-subunit 2 isoform 2 [Theobroma cacao]
Length = 471
Score = 144 bits (364), Expect = 9e-33
Identities = 69/77 (89%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD GRAEY+SVTD+EALEAF+RLS+LEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 388 HSFLKDAGRAEYYSVTDEEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPDGTKVV 447
Query: 183 LNCSGRGDKDVHTAIKH 233
+NCSGRGDKDVHTAIKH
Sbjct: 448 INCSGRGDKDVHTAIKH 464
>gb|EOY12485.1| Tryptophan synthase beta-subunit 2 isoform 1 [Theobroma cacao]
Length = 479
Score = 144 bits (364), Expect = 9e-33
Identities = 69/77 (89%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD GRAEY+SVTD+EALEAF+RLS+LEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 388 HSFLKDAGRAEYYSVTDEEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPDGTKVV 447
Query: 183 LNCSGRGDKDVHTAIKH 233
+NCSGRGDKDVHTAIKH
Sbjct: 448 INCSGRGDKDVHTAIKH 464
>gb|ABR17785.1| unknown [Picea sitchensis]
Length = 496
Score = 143 bits (361), Expect = 2e-32
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKDI RAEYHSVTD+EAL+AFQRLSRLEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 417 HSFLKDICRAEYHSVTDQEALDAFQRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVV 476
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV T IKH
Sbjct: 477 LNCSGRGDKDVQTVIKH 493
>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 143 bits (360), Expect = 3e-32
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HS+LKD+GRAEYHSVTD EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 393 HSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVV 452
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 453 LNCSGRGDKDVQTAIKY 469
>ref|XP_004244142.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum lycopersicum]
Length = 456
Score = 142 bits (358), Expect = 5e-32
Identities = 68/77 (88%), Positives = 76/77 (98%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+LA+GTKVV
Sbjct: 377 HSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLANGTKVV 436
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 437 LNCSGRGDKDVQTAIKY 453
>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Cucumis sativus]
Length = 472
Score = 142 bits (357), Expect = 6e-32
Identities = 68/77 (88%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HS+LKD+GRAEYHSVTD EALEAF+RL+RLEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 393 HSYLKDLGRAEYHSVTDDEALEAFKRLARLEGIIPALETSHALAYLEKLCPTLPDGTKVV 452
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 453 LNCSGRGDKDVQTAIKY 469
>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
synthase beta subunit [Camptotheca acuminata]
gi|2801771|gb|AAB97526.1| tryptophan synthase beta
[Camptotheca acuminata]
Length = 466
Score = 141 bits (356), Expect = 8e-32
Identities = 68/77 (88%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKDIGRAEY+ TD+EALEAF+RLSRLEGIIPALETSHALA+LEKLCP+L +GTKVV
Sbjct: 387 HSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVV 446
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 447 LNCSGRGDKDVHTAIKH 463
>gb|EMJ12603.1| hypothetical protein PRUPE_ppa005257mg [Prunus persica]
Length = 470
Score = 141 bits (356), Expect = 8e-32
Identities = 68/77 (88%), Positives = 73/77 (94%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD RAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L DG KVV
Sbjct: 391 HSFLKDTQRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGAKVV 450
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDVHTAIKH
Sbjct: 451 LNCSGRGDKDVHTAIKH 467
>gb|ESW18433.1| hypothetical protein PHAVU_006G040500g [Phaseolus vulgaris]
Length = 408
Score = 140 bits (354), Expect = 1e-31
Identities = 66/79 (83%), Positives = 76/79 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+SVTD+EALEAF+R+SRLEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 329 HSFLKDVGRAEYYSVTDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLPNGTKVV 388
Query: 183 LNCSGRGDKDVHTAIKHFN 239
+NCSGRGDKDV TA+K+ N
Sbjct: 389 VNCSGRGDKDVQTAVKYLN 407
>gb|AFK35529.1| unknown [Lotus japonicus]
Length = 417
Score = 140 bits (354), Expect = 1e-31
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+SVTD+EALEAF+RLS+LEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 338 HSFLKDVGRAEYYSVTDEEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPNGTKVV 397
Query: 183 LNCSGRGDKDVHTAIKHFN 239
+NCSGRGDKDV TA K+FN
Sbjct: 398 VNCSGRGDKDVQTASKYFN 416
>ref|XP_006368050.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like,
partial [Solanum tuberosum]
Length = 237
Score = 140 bits (353), Expect = 2e-31
Identities = 67/77 (87%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 158 HSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVV 217
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 218 LNCSGRGDKDVQTAIKY 234
>ref|XP_006366042.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum tuberosum]
Length = 456
Score = 140 bits (353), Expect = 2e-31
Identities = 67/77 (87%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L +GTKVV
Sbjct: 377 HSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVV 436
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 437 LNCSGRGDKDVQTAIKY 453
>ref|XP_002317583.2| hypothetical protein POPTR_0011s13930g [Populus trichocarpa]
gi|550328353|gb|EEE98195.2| hypothetical protein
POPTR_0011s13930g [Populus trichocarpa]
Length = 472
Score = 139 bits (351), Expect = 3e-31
Identities = 68/77 (88%), Positives = 74/77 (96%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD GRAEY+SVTD+EAL+AF+RLSRLEGIIPALETSHALAYLEKLCP+L DGTKVV
Sbjct: 393 HSFLKDKGRAEYYSVTDQEALDAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVV 452
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 453 LNCSGRGDKDVQTAIKY 469
>ref|XP_004248313.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
[Solanum lycopersicum]
Length = 468
Score = 139 bits (350), Expect = 4e-31
Identities = 66/77 (85%), Positives = 75/77 (97%)
Frame = +3
Query: 3 HSFLKDIGRAEYHSVTDKEALEAFQRLSRLEGIIPALETSHALAYLEKLCPSLADGTKVV 182
HSFLKD+GRAEY+S+TD+EALEAF+RLSRLEGIIPALETSHALAYLEKLCP+L +GT+VV
Sbjct: 389 HSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTRVV 448
Query: 183 LNCSGRGDKDVHTAIKH 233
LNCSGRGDKDV TAIK+
Sbjct: 449 LNCSGRGDKDVQTAIKY 465