BLASTX nr result

ID: Ephedra25_contig00011627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011627
         (879 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]           44   2e-08
ref|XP_004508147.1| PREDICTED: ATP-citrate synthase beta chain p...    40   3e-06
ref|XP_001760999.1| predicted protein [Physcomitrella patens] gi...    57   9e-06

>gb|AAK13318.1|AF290958_1 ATP:citrate lyase [Capsicum annuum]
          Length = 608

 Score = 43.5 bits (101), Expect(2) = 2e-08
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +3

Query: 171 ASSMVALK*SIIRVVAIVSWGLLETDAR*LIAFARFNNKV 290
           ASSM ALK   IRVVAI++ G+ E+D + LI FA+ NNKV
Sbjct: 93  ASSMSALKQPTIRVVAIIAEGVPESDTKQLIGFAKANNKV 132



 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
 Frame = +2

Query: 287 GIQVAAFKIHDTAGTIKNIIRCK---TWIYRLCVQIGMIMSILY 409
           GIQ  AFKI DTAGTI NII+CK    WI  + ++ G + + LY
Sbjct: 141 GIQAGAFKIGDTAGTIDNIIQCKLLQAWICGIRLKSGGMSNELY 184


>ref|XP_004508147.1| PREDICTED: ATP-citrate synthase beta chain protein 2-like [Cicer
           arietinum]
          Length = 609

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +3

Query: 171 ASSMVALK*SIIRVVAIVSWGLLETDAR*LIAFARFNNKV 290
           ASS+ ALK   IRVV+I+S  + E+D + LIA AR NNKV
Sbjct: 93  ASSLAALKQPTIRVVSIISEVVSESDTKQLIACARVNNKV 132



 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +2

Query: 287 GIQVAAFKIHDTAGTIKNIIRCKTW 361
           GIQ  AFKI DT GTI+NII CK +
Sbjct: 141 GIQAGAFKIGDTVGTIENIIHCKLY 165


>ref|XP_001760999.1| predicted protein [Physcomitrella patens]
           gi|162687685|gb|EDQ74066.1| predicted protein
           [Physcomitrella patens]
          Length = 610

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
 Frame = +3

Query: 96  GYIPNSC-IQSAFSKGCHQRTYIYGYASSMVALK*SIIRVVAIVSWGLLETDAR*LIAFA 272
           G IP++C +        +  ++   YASSM ALK S IRVVAI++ G+ E DA+ LIA+A
Sbjct: 67  GSIPSACKVHPTADVFINFASFRSAYASSMEALKQSTIRVVAIIAEGVPEADAKRLIAYA 126

Query: 273 RFNNKVYKLQPLKFMIQQEQLKTSFDA------------RPGSIVFVSKS 386
           R NNKV         IQ    K    A            RPGS+ FVSKS
Sbjct: 127 RANNKVVIGPATVGGIQAGAFKIGDTAGTLDNIIHCKLYRPGSVGFVSKS 176


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