BLASTX nr result
ID: Ephedra25_contig00011412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00011412
(1573 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V... 512 e-142
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li... 510 e-142
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr... 509 e-142
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li... 507 e-141
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li... 506 e-140
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc... 506 e-140
ref|XP_002988235.1| hypothetical protein SELMODRAFT_235493 [Sela... 506 e-140
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A... 505 e-140
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li... 504 e-140
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li... 501 e-139
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 501 e-139
ref|XP_002520343.1| replication factor C / DNA polymerase III ga... 501 e-139
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi... 500 e-139
gb|ACG35868.1| replication factor C subunit 3 [Zea mays] 500 e-139
ref|XP_001771105.1| predicted protein [Physcomitrella patens] gi... 499 e-138
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li... 499 e-138
ref|XP_002302226.1| replication factor C 36 kDA family protein [... 498 e-138
gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus... 498 e-138
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr... 497 e-138
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li... 497 e-138
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 512 bits (1318), Expect = e-142
Identities = 254/362 (70%), Positives = 306/362 (84%)
Frame = -2
Query: 1497 EETVAMETDEGYVDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDII 1318
E M+ DE + L+ KGK+ ++ P + PWVEKYRPQSL DVAAHRDI+
Sbjct: 3 EAVTVMDIDE----EDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIV 58
Query: 1317 DTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVR 1138
DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG+Q+ NM+LELNASDDRGIDVVR
Sbjct: 59 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVR 118
Query: 1137 QQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVN 958
QQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VN
Sbjct: 119 QQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178
Query: 957 KIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNI 778
KIIPALQSRCTRFRFAPL+A HV +RL+ VI E+L+V++ G++A+ RL GDMRKALNI
Sbjct: 179 KIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNI 238
Query: 777 LQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLD 598
LQST M+S ++ EE VYL TGNP+PKDIEQI YWLLNESFA S+ ISE+K +KG+AL+D
Sbjct: 239 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVD 298
Query: 597 IIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAA 418
++R++ +F+F+I MP++VR+QLIN LADIEYRL+FG N+KLQLGSLI++FT R ALVAA
Sbjct: 299 VVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAA 358
Query: 417 AK 412
AK
Sbjct: 359 AK 360
>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
Length = 364
Score = 510 bits (1313), Expect = e-142
Identities = 256/363 (70%), Positives = 307/363 (84%), Gaps = 2/363 (0%)
Frame = -2
Query: 1494 ETVA-METDEGYVDQQRIDLENRKGKAKLIA-EDPSLRRGPWVEKYRPQSLQDVAAHRDI 1321
ETV+ M+ DE D+ + GK +++ P ++ PWVEKYRPQSL DVAAHRDI
Sbjct: 5 ETVSLMDIDE---DENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61
Query: 1320 IDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVV 1141
+DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVV
Sbjct: 62 VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121
Query: 1140 RQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYV 961
RQQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN V
Sbjct: 122 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181
Query: 960 NKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALN 781
NKIIPALQSRCTRFRFAPL HV +RL+ VI+ E L+VT+ G++A+ RLC GDMRKALN
Sbjct: 182 NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241
Query: 780 ILQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALL 601
ILQST M+S ++ EE VYL TGNP+PKDIEQI YWLLNESFA+S++ ISEMK +KG+AL+
Sbjct: 242 ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301
Query: 600 DIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVA 421
DI+R++ +F+F+I MP++VR++L+N LADIEYRL+FG N+KLQLGS+IS FT R A+VA
Sbjct: 302 DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361
Query: 420 AAK 412
AAK
Sbjct: 362 AAK 364
>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
gi|557536359|gb|ESR47477.1| hypothetical protein
CICLE_v10001597mg [Citrus clementina]
Length = 364
Score = 509 bits (1312), Expect = e-142
Identities = 254/362 (70%), Positives = 305/362 (84%), Gaps = 1/362 (0%)
Frame = -2
Query: 1494 ETVA-METDEGYVDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDII 1318
ETV+ M+ DE + Q + ++ + P ++ PWVEKYRPQSL DVAAHRDI+
Sbjct: 5 ETVSLMDFDED--ENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIV 62
Query: 1317 DTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVR 1138
DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVR
Sbjct: 63 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 122
Query: 1137 QQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVN 958
QQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN VN
Sbjct: 123 QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 182
Query: 957 KIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNI 778
KIIPALQSRCTRFRFAPL HV +RL+ VI+ E L+VT+ G++A+ RLC GDMRKALNI
Sbjct: 183 KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNI 242
Query: 777 LQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLD 598
LQST M+S ++ EE VYL TGNP+PKDIEQI YWLLNESFA+S++ ISEMK +KG+AL+D
Sbjct: 243 LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVD 302
Query: 597 IIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAA 418
I+R++ +F+F+I MP++VR++L+N LADIEYRL+FG N+KLQLGS+IS FT R A+VAA
Sbjct: 303 IVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAA 362
Query: 417 AK 412
AK
Sbjct: 363 AK 364
>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 363
Score = 507 bits (1305), Expect = e-141
Identities = 251/340 (73%), Positives = 299/340 (87%), Gaps = 2/340 (0%)
Frame = -2
Query: 1428 KGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPP 1255
K K+ ++A +P+ + PWVEKYRP SL DVAAHRDI+DTIDRLT EN+LPHLLLYGPP
Sbjct: 23 KAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPP 82
Query: 1254 GTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVK 1075
GTGKTST+LAVARKLYG QYQNM+LELNASDDRGIDVVRQQIQDFAS+QSLSFG K +VK
Sbjct: 83 GTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVK 142
Query: 1074 LVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAG 895
LVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKIIPALQSRCTRFRFAPL+A
Sbjct: 143 LVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAV 202
Query: 894 HVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATG 715
HV +RL+ VI+ E L+V D G++A+ RL GDMRKALNILQST M+S ++ EETVYL TG
Sbjct: 203 HVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEETVYLCTG 262
Query: 714 NPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQ 535
NP+PKDIEQI YWLLNE FA+S++ I EMKT+KG+AL+DI+R++ LF+F+I MP+ VR+Q
Sbjct: 263 NPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALVDIVREVTLFVFKIKMPSAVRVQ 322
Query: 534 LINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
L+N LADIEYRL+FG N+KLQLGS+I++F+ R ALVAAA
Sbjct: 323 LMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVAAA 362
>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 361
Score = 506 bits (1302), Expect = e-140
Identities = 254/360 (70%), Positives = 301/360 (83%), Gaps = 2/360 (0%)
Frame = -2
Query: 1488 VAMETDEGYVDQQRIDLENRKGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIID 1315
+A T +D KGK+ + A +P + PWVEKYRPQSL DVAAHRDI+D
Sbjct: 1 MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60
Query: 1314 TIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQ 1135
TIDRLT EN+LPHLLLYGPPGTGKTST+LAVARKLYG QYQNM+LELNASDDRGIDVVRQ
Sbjct: 61 TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120
Query: 1134 QIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNK 955
QIQDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNK
Sbjct: 121 QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180
Query: 954 IIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNIL 775
IIPALQSRCTRFRFAPL+A HV +RL+ VI+ E L+V D G++A RL GDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240
Query: 774 QSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDI 595
QST M+S ++ EE VYL TGNP+PKDIE I YWLLNE FA+S++ I EMKT+KG+AL+DI
Sbjct: 241 QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300
Query: 594 IRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
+R++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS+I++FT R ALVAAA
Sbjct: 301 VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360
>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit
[Medicago truncatula]
Length = 355
Score = 506 bits (1302), Expect = e-140
Identities = 254/363 (69%), Positives = 302/363 (83%), Gaps = 2/363 (0%)
Frame = -2
Query: 1497 EETVAMETDEGYVDQQRIDLENRKGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRD 1324
EET AM+ D KGK + A +PS + WVEKYRPQSL DVAAHRD
Sbjct: 3 EETYAMDIDV-----------TDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRD 51
Query: 1323 IIDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDV 1144
I+DTIDRLT EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDV
Sbjct: 52 IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 111
Query: 1143 VRQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNY 964
VRQQIQDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+
Sbjct: 112 VRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 171
Query: 963 VNKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKAL 784
VNKIIPALQSRCTRFRFAPL+A HV +RL+ VI ERL+V D G+SA+ RL GDMRKAL
Sbjct: 172 VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKAL 231
Query: 783 NILQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMAL 604
NILQST M+S ++ EE VYL TGNP+PKDIEQI YWLLNE ++ S++ I +MKT+KG+AL
Sbjct: 232 NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLAL 291
Query: 603 LDIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALV 424
+DI+R++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS++++FT R A+V
Sbjct: 292 IDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMV 351
Query: 423 AAA 415
AAA
Sbjct: 352 AAA 354
>ref|XP_002988235.1| hypothetical protein SELMODRAFT_235493 [Selaginella moellendorffii]
gi|302819400|ref|XP_002991370.1| hypothetical protein
SELMODRAFT_236274 [Selaginella moellendorffii]
gi|300140763|gb|EFJ07482.1| hypothetical protein
SELMODRAFT_236274 [Selaginella moellendorffii]
gi|300143967|gb|EFJ10654.1| hypothetical protein
SELMODRAFT_235493 [Selaginella moellendorffii]
Length = 332
Score = 506 bits (1302), Expect = e-140
Identities = 248/326 (76%), Positives = 284/326 (87%)
Frame = -2
Query: 1389 RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKL 1210
R GPWVEKYRP SL DVAAH+DIIDTIDRLT ENKLPHLLLYGPPGTGKTST+LAVARKL
Sbjct: 7 RSGPWVEKYRPASLADVAAHKDIIDTIDRLTAENKLPHLLLYGPPGTGKTSTILAVARKL 66
Query: 1209 YGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQ 1030
YG Q+QNM+LELNASDDRGIDVVRQQIQDFAS+QS+SFG K NVKL++LDEADAMTKDAQ
Sbjct: 67 YGPQFQNMILELNASDDRGIDVVRQQIQDFASTQSISFGEKANVKLIILDEADAMTKDAQ 126
Query: 1029 FSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERL 850
FSLRR+IEKYTK TRFCL+CNYV+KIIPALQSRCTRFRF PL A HV++RL FVI +ERL
Sbjct: 127 FSLRRIIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFPPLQAQHVRERLEFVIDQERL 186
Query: 849 NVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLL 670
+VT+DG+SAI RL GDMRKALNILQSTQM+ P V E VY TGNP PK+IEQI WLL
Sbjct: 187 DVTEDGLSAIVRLSNGDMRKALNILQSTQMAEPHVTEAAVYSCTGNPTPKEIEQIASWLL 246
Query: 669 NESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFG 490
NESF ++Y I ++KT KG+AL+D++R++ FIF I+MP +R+ LIN LADIEYRL G
Sbjct: 247 NESFQSAYSNIVQLKTSKGLALVDVVRELQPFIFTISMPGNIRVPLINCLADIEYRLASG 306
Query: 489 TNEKLQLGSLISAFTHTRQALVAAAK 412
NEKLQLG+L+SAFTHTR ALV+AA+
Sbjct: 307 PNEKLQLGALVSAFTHTRVALVSAAR 332
>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
gi|548860608|gb|ERN18175.1| hypothetical protein
AMTR_s00054p00174840 [Amborella trichopoda]
Length = 359
Score = 505 bits (1300), Expect = e-140
Identities = 251/339 (74%), Positives = 294/339 (86%), Gaps = 1/339 (0%)
Frame = -2
Query: 1425 GKAKLIAEDPSLRRG-PWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 1249
GK K++ + L + PWVEKYRPQSL DVAAH+DIIDT+DRLTNEN+LPHLLLYGPPGT
Sbjct: 21 GKGKVVEREQLLPKATPWVEKYRPQSLADVAAHKDIIDTVDRLTNENRLPHLLLYGPPGT 80
Query: 1248 GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 1069
GKTSTVLAVARKLYG +NM+LELNASDDRGIDVVRQQIQDFAS+QS SFG K +VKLV
Sbjct: 81 GKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKSSVKLV 140
Query: 1068 LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 889
LLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKIIPALQSRCTRFRFAPL+A HV
Sbjct: 141 LLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHV 200
Query: 888 QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 709
++RL++VI+ E L+V + G+SA+ RL GDMRKALNILQST M+S V E+ VYL TGNP
Sbjct: 201 RERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQSTHMASQHVSEKAVYLCTGNP 260
Query: 708 VPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 529
+PKD+EQI WLLNE FA SY+YIS+MKT KG+AL+DI+R++ +FIF I MP+ VR+QLI
Sbjct: 261 MPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVREVTMFIFMIKMPSTVRVQLI 320
Query: 528 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 412
N LADIEYRL+FG N+KLQLGSLI +FTH R A+ AAAK
Sbjct: 321 NDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359
>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
gi|449499057|ref|XP_004160708.1| PREDICTED: replication
factor C subunit 5-like [Cucumis sativus]
Length = 363
Score = 504 bits (1297), Expect = e-140
Identities = 247/340 (72%), Positives = 295/340 (86%), Gaps = 3/340 (0%)
Frame = -2
Query: 1422 KAKLIAEDPSLRRG---PWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPG 1252
K K +A + G PWVEK+RP+SL DVAAHRDI+DTID+LT+EN+LPHLLLYGPPG
Sbjct: 24 KGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPG 83
Query: 1251 TGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKL 1072
TGKTST+LAVARKLYG Y NM+LELNASDDRGIDVVRQQIQDFAS+QS SFG K +VKL
Sbjct: 84 TGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKL 143
Query: 1071 VLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGH 892
VLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VNKIIPALQSRCTRFRFAPL+ H
Sbjct: 144 VLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFH 203
Query: 891 VQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGN 712
V +RLR+VI+ ERL+VT+ G++A+ RLC GDMRKALNILQST M+S + EE VYL TGN
Sbjct: 204 VTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALNILQSTHMASQHITEEAVYLCTGN 263
Query: 711 PVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQL 532
P+PKDIEQI +WLLNE F++S++ ISE+KT+KG+AL+DI+R++ LF+F+I MP+ +R+QL
Sbjct: 264 PMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALVDIVREVTLFVFKIEMPSNIRVQL 323
Query: 531 INALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 412
IN LADIEYR+TFG N+KLQLGSLIS+FT R ALV AA+
Sbjct: 324 INDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVGAAQ 363
>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
arietinum]
Length = 363
Score = 501 bits (1290), Expect = e-139
Identities = 248/340 (72%), Positives = 296/340 (87%), Gaps = 2/340 (0%)
Frame = -2
Query: 1428 KGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPP 1255
KGK + A +PS+ + WVEKYRPQSL DVAAHRDI+DTIDRLT EN+LPHLLLYGPP
Sbjct: 23 KGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPP 82
Query: 1254 GTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVK 1075
GTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVRQQIQDFAS+QSLSFG K +VK
Sbjct: 83 GTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVK 142
Query: 1074 LVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAG 895
L+LLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKII ALQSRCTRFRFAPL+A
Sbjct: 143 LILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQALQSRCTRFRFAPLDAV 202
Query: 894 HVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATG 715
HV +RL+ VI+ E L+V D G+SA+ RL GDMRKALNILQST M+S ++ EE VYL TG
Sbjct: 203 HVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTG 262
Query: 714 NPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQ 535
NP+PKDIEQI YWLLNE +++SY+ I ++KT+KG+AL+DI+R++ +F+F+I MPA VR+Q
Sbjct: 263 NPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREVTMFVFKIKMPAAVRVQ 322
Query: 534 LINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
L+N LADIEYRL+FG N+KLQLGS+I++FT R ALVAAA
Sbjct: 323 LVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
Length = 361
Score = 501 bits (1290), Expect = e-139
Identities = 248/338 (73%), Positives = 296/338 (87%)
Frame = -2
Query: 1428 KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 1249
KGKA L + P R PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 24 KGKAPL-SSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 82
Query: 1248 GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 1069
GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFAS++SLSFG K +VK+V
Sbjct: 83 GKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASARSLSFGAKQSVKMV 142
Query: 1068 LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 889
LLDEADAMTKDAQF+LRRVIEK+T++TRF L+CN+VNKIIPALQSRCTRFRFAPL+ HV
Sbjct: 143 LLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHV 202
Query: 888 QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 709
++RL+ +IQ E L+V D G++A+ RL GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 203 RERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAVYLCTGNP 262
Query: 708 VPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 529
+PKDIEQI YWLLNESF+ S++ IS+MK +KG+AL+DIIR++ +F+F+I MP++VRI+LI
Sbjct: 263 MPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLI 322
Query: 528 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
N LADIEYRL+F N+KLQLG+LIS FT R A+VAAA
Sbjct: 323 NDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360
>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540562|gb|EEF42129.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 360
Score = 501 bits (1289), Expect = e-139
Identities = 251/357 (70%), Positives = 300/357 (84%)
Frame = -2
Query: 1482 METDEGYVDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDR 1303
M+ DE ++Q + KGK + + PWVEKYRPQSL DVAAHRDI+DTIDR
Sbjct: 8 MDIDEDVKEKQNQLSKPNKGKNVFV----DTKATPWVEKYRPQSLADVAAHRDIVDTIDR 63
Query: 1302 LTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQD 1123
LTNEN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVRQQIQD
Sbjct: 64 LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVRQQIQD 123
Query: 1122 FASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPA 943
FAS+QS SF K VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VNKIIPA
Sbjct: 124 FASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 183
Query: 942 LQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQ 763
LQSRCTRFRFAPL+ HV DRL+ VI+ E L+V + G++A+ RL GDMRKALNILQST
Sbjct: 184 LQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNILQSTH 243
Query: 762 MSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDI 583
M+S ++ EE V+L TGNP+PKDI+QI YWLLNESFA S++ ISE+KTKKG+AL+DI+R++
Sbjct: 244 MASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVDIVREV 303
Query: 582 PLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 412
+F+F+I MP++VR+QLIN +ADIEYRL+FG ++KLQLGSL+++FT R ALVAAAK
Sbjct: 304 TMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVAAAK 360
>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
unknown [Zea mays] gi|413939151|gb|AFW73702.1|
replication factor C subunit 3 [Zea mays]
Length = 362
Score = 500 bits (1288), Expect = e-139
Identities = 246/338 (72%), Positives = 295/338 (87%)
Frame = -2
Query: 1428 KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 1249
KGKA L A R PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 27 KGKAPLSAGG---RAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 83
Query: 1248 GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 1069
GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFA ++SLSFG + +VKLV
Sbjct: 84 GKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLV 143
Query: 1068 LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 889
LLDEADAMTKDAQF+LRRVIEKYT++TRF L+CN+VNKIIPALQSRCTRFRFAPL+ HV
Sbjct: 144 LLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHV 203
Query: 888 QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 709
++RL+ +I+ E L+V D G++A+ RL GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 204 RERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNP 263
Query: 708 VPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 529
+PKDIEQI +WLLNE F+ S++YIS+MK +KG+AL+DIIR++ +F+F+I MP++VR++LI
Sbjct: 264 MPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLI 323
Query: 528 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
N LADIEYRL+F N+KLQLG+LIS FT TR A+VAAA
Sbjct: 324 NDLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361
>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 500 bits (1287), Expect = e-139
Identities = 246/338 (72%), Positives = 295/338 (87%)
Frame = -2
Query: 1428 KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 1249
KGKA L A R PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 27 KGKALLSAGG---RAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 83
Query: 1248 GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 1069
GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFA ++SLSFG + +VKLV
Sbjct: 84 GKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLV 143
Query: 1068 LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 889
LLDEADAMTKDAQF+LRRVIEKYT++TRF L+CN+VNKIIPALQSRCTRFRFAPL+ HV
Sbjct: 144 LLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHV 203
Query: 888 QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 709
++RL+ +I+ E L+V D G++A+ RL GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 204 RERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNP 263
Query: 708 VPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 529
+PKDIEQI +WLLNE F+ S++YIS+MK +KG+AL+DIIR++ +F+F+I MP++VR++LI
Sbjct: 264 MPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLI 323
Query: 528 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
N LADIEYRL+F N+KLQLG+LIS FT TR A+VAAA
Sbjct: 324 NNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361
>ref|XP_001771105.1| predicted protein [Physcomitrella patens] gi|162677638|gb|EDQ64106.1|
predicted protein [Physcomitrella patens]
Length = 365
Score = 499 bits (1286), Expect = e-138
Identities = 249/353 (70%), Positives = 298/353 (84%), Gaps = 12/353 (3%)
Frame = -2
Query: 1434 NRKGKAKL-IAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGP 1258
++KGK K+ + ++ GPWVEKYRP SL DVAAH+DIIDTIDRLT EN+LPHLLLYGP
Sbjct: 13 SQKGKGKVDLNNGRQVKGGPWVEKYRPTSLADVAAHKDIIDTIDRLTGENRLPHLLLYGP 72
Query: 1257 PGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNV 1078
PGTGKTST+LAVARKLYG QYQNM+LELNASDDRGI+VVRQQIQDFAS++S+SFG K+NV
Sbjct: 73 PGTGKTSTILAVARKLYGAQYQNMILELNASDDRGIEVVRQQIQDFASTKSISFGPKVNV 132
Query: 1077 KLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNA 898
KLV+LDEADAMTKDAQF+LRRVIEKYTK+TRFCL+CNY +KIIPALQSRCTRFRFAPL+
Sbjct: 133 KLVILDEADAMTKDAQFALRRVIEKYTKSTRFCLICNYASKIIPALQSRCTRFRFAPLDP 192
Query: 897 GHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLAT 718
+V +RLR+VIQ+E L+VTD G++AI RL GD+RKALNILQS QM+SP + EE VYL T
Sbjct: 193 ANVTERLRYVIQQEGLDVTDGGLAAIVRLANGDLRKALNILQSAQMASPHLTEEAVYLCT 252
Query: 717 GNPVPKDIEQICYWLLNESFANSYRY-----------ISEMKTKKGMALLDIIRDIPLFI 571
GNP+PKDIEQI YWLLNE F+ S++ I++MKT KG+AL+D+ R++ F+
Sbjct: 253 GNPMPKDIEQIAYWLLNEPFSTSFQSILNNLIKLFHDITKMKTSKGLALVDVARELQPFV 312
Query: 570 FRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 412
F I MP VR+QLI+ALAD+EYRL FGTNEKLQLG+L+ AFT R ALVAAA+
Sbjct: 313 FTINMPPTVRVQLIDALADVEYRLAFGTNEKLQLGALLGAFTRARTALVAAAR 365
>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
Length = 357
Score = 499 bits (1284), Expect = e-138
Identities = 247/350 (70%), Positives = 297/350 (84%)
Frame = -2
Query: 1461 VDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKL 1282
+D +ID + KGK + +P + PWVEK+RPQSL DVAAHRDI++TIDRL + N+L
Sbjct: 10 IDDDKIDTKPSKGKNIVSNTEP--KSVPWVEKFRPQSLSDVAAHRDIVETIDRLASSNRL 67
Query: 1281 PHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSL 1102
PHLLLYGPPGTGKTST+LA+ARKLYG Q QNM+LELNASDDRGIDVVRQQIQDFAS+QS+
Sbjct: 68 PHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQIQDFASTQSI 127
Query: 1101 SFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTR 922
SFG K VKLVLLDEADAMTKDAQF+LRRVIE+YT+ TRF L+CN VNK+IPALQSRCTR
Sbjct: 128 SFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKVIPALQSRCTR 187
Query: 921 FRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVD 742
FRFAPL+A HV +RL+ V++ E+L+V + G+ A+ RL GDMRKALNILQST M+S ++
Sbjct: 188 FRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQSTHMASQQIS 247
Query: 741 EETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIRDIPLFIFRI 562
E+ VYL TGNP+PKDIEQI YWLLNE FA S + ISE+KT+KG+AL+DI+R++ +F+F+I
Sbjct: 248 EDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVREVTMFVFKI 307
Query: 561 TMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 412
MPA VR+QLIN +ADIEYRLTFG N+KLQLGSLISAFT R ALVAAAK
Sbjct: 308 KMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357
>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
family protein [Populus trichocarpa]
Length = 363
Score = 498 bits (1283), Expect = e-138
Identities = 248/362 (68%), Positives = 301/362 (83%)
Frame = -2
Query: 1500 MEETVAMETDEGYVDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDI 1321
M E +A+ + +Q + N+ K + A P + PWVEKYRPQSL DVAAHRDI
Sbjct: 1 MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60
Query: 1320 IDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVV 1141
IDTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVV
Sbjct: 61 IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120
Query: 1140 RQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYV 961
R+QIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+V
Sbjct: 121 RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 960 NKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALN 781
NKIIPALQSRCTRFRFAPL+ HV +RL+ VI+ E L+V + G+ A+ L GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240
Query: 780 ILQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALL 601
ILQST M+S ++ EETVYL TGNP+P+D++QI +WLLNESFA SY+ ISE+KT+KG+AL+
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300
Query: 600 DIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVA 421
DI+R++ +F+F+I M +++R+ LIN LADIEYRL+FG N+KLQLGSLI++FT R ALVA
Sbjct: 301 DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360
Query: 420 AA 415
AA
Sbjct: 361 AA 362
>gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
Length = 359
Score = 498 bits (1281), Expect = e-138
Identities = 248/358 (69%), Positives = 303/358 (84%), Gaps = 2/358 (0%)
Frame = -2
Query: 1482 METDEGYVDQQRIDLENRKGKAKLIAED-PSLRRG-PWVEKYRPQSLQDVAAHRDIIDTI 1309
M T +D D + G+ + +ED P+ + PWVEKYRPQSL DVAAHRDI+DTI
Sbjct: 1 MTTHPMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTI 60
Query: 1308 DRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQI 1129
D+LT EN+LPHLLLYGPPGTGKTST+LAVARKLYG +++NM+LELNASDDRGIDVVRQQI
Sbjct: 61 DKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQI 120
Query: 1128 QDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKII 949
QDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKII
Sbjct: 121 QDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 180
Query: 948 PALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQS 769
PALQSRCTRFRFAPL+A HV +R++ VI+ E L+V DDG+ A+ RL GDMRKALNILQS
Sbjct: 181 PALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQS 240
Query: 768 TQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDIIR 589
T M++ ++ EE +YL TGNP+PKDIEQI YWLLNE + +S++ I EMKT+KG+AL+DIIR
Sbjct: 241 THMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIR 300
Query: 588 DIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS+I++FT R ALVAAA
Sbjct: 301 EVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358
>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
gi|557086521|gb|ESQ27373.1| hypothetical protein
EUTSA_v10018756mg [Eutrema salsugineum]
Length = 361
Score = 497 bits (1280), Expect = e-138
Identities = 254/361 (70%), Positives = 301/361 (83%), Gaps = 1/361 (0%)
Frame = -2
Query: 1491 TVAMETDEGYVDQQRIDLENRKGKAKL-IAEDPSLRRGPWVEKYRPQSLQDVAAHRDIID 1315
T AM+ D VD+ + KGK P + PWVEKYRPQSL DVAAHRDIID
Sbjct: 5 TSAMDID---VDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRDIID 61
Query: 1314 TIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQ 1135
TIDRLTNENKLPHLLLYGPPGTGKTST+LAVARKLYG +Y+NM+LELNASDDRGIDVVRQ
Sbjct: 62 TIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVRQ 121
Query: 1134 QIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNK 955
QIQDFAS+QS S G K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+ N+VNK
Sbjct: 122 QIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNK 180
Query: 954 IIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNIL 775
IIPALQSRCTRFRFAPL+ HV RL+ VI+ E L+V++ G++A+ RL GDMRKA+NIL
Sbjct: 181 IIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAMNIL 240
Query: 774 QSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALLDI 595
QST M+S ++ EE VYL TGNP+P DIEQI +WLLNE FA SY+ ISEMKT+KG+A++DI
Sbjct: 241 QSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAIVDI 300
Query: 594 IRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 415
+R++ +F+F+I+MP+ VR+QLIN LADIEYRL+FG N+KLQLG++IS FTH R ALVAAA
Sbjct: 301 VREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARSALVAAA 360
Query: 414 K 412
K
Sbjct: 361 K 361
>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
Length = 357
Score = 497 bits (1279), Expect = e-138
Identities = 250/363 (68%), Positives = 300/363 (82%)
Frame = -2
Query: 1500 MEETVAMETDEGYVDQQRIDLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDI 1321
M ET+++ +D +ID + GK + +P R PWVEK+RPQSL DVAAHRDI
Sbjct: 1 MAETISLMD----IDDDKIDTKPNNGKNIVSNTEP--RSVPWVEKFRPQSLSDVAAHRDI 54
Query: 1320 IDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVV 1141
++TIDRL + N+LPHLLLYGPPGTGKTST+LA+ARKLYG Q NM+LELNASDDRGIDVV
Sbjct: 55 VETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVV 114
Query: 1140 RQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYV 961
RQQIQDFAS+QS+SFG K VKLVLLDEADAMTKDAQF+LRRVIEKYT+ TRF LVCN V
Sbjct: 115 RQQIQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNV 174
Query: 960 NKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALN 781
NK+IPALQSRCTRFRFAPL+A HV +RL+ V++ E+L+V + G+ A+ RL GDMRKALN
Sbjct: 175 NKVIPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALN 234
Query: 780 ILQSTQMSSPRVDEETVYLATGNPVPKDIEQICYWLLNESFANSYRYISEMKTKKGMALL 601
ILQST M+S ++ E+ VYL TGNP+PKDIEQI YWLLNE F S + ISE+KT+KG+AL+
Sbjct: 235 ILQSTHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALV 294
Query: 600 DIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVA 421
DI+R++ +F+F+I MPA VR+QLIN +ADIEYRLTFG N+KLQLGSLISAFT R ALVA
Sbjct: 295 DIVREVTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVA 354
Query: 420 AAK 412
AAK
Sbjct: 355 AAK 357