BLASTX nr result

ID: Ephedra25_contig00011138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011138
         (1201 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16339.1| unknown [Picea sitchensis]                             108   4e-21
gb|ABR17075.1| unknown [Picea sitchensis]                              99   3e-18
gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN409...    87   2e-14

>gb|ABR16339.1| unknown [Picea sitchensis]
          Length = 467

 Score =  108 bits (270), Expect = 4e-21
 Identities = 83/239 (34%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
 Frame = +2

Query: 155 PKVIENSESPITEEGPRNSNLSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHK 334
           P+  ++ ES             RSYSTGHSLVRLRKDM ++ +TEW+I T +GL P   +
Sbjct: 243 PESADSQESLYVLGFDEGKKFRRSYSTGHSLVRLRKDM-DQLATEWYICTAEGLKPGLQR 301

Query: 335 TCTYAINQAMALHSKSQGYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRW 514
            C+         HS+SQG +    +    P FSKQ S        + T      GS RRW
Sbjct: 302 NCSL----TALSHSRSQGPSTSEIR----PGFSKQASISGTASCSRDT-----GGSGRRW 348

Query: 515 YEKRFKSER-DSTEMDPANFRRSLSERTGVASDCVFNPEGYNPQSHEHQEDAAKAYILNL 691
           YE+  +SER   + M P++F RS SE+  +A       +  N +S    +   K Y+ +L
Sbjct: 349 YERGLRSERLTISSMYPSSFLRSYSEQRTLA-------DSRNQESSAGSQQERKVYLQSL 401

Query: 692 KKTLKRITGLDDESPSSSNTVVASPVIAGGSVSAKGIVKAGSL*NWGSSIAAINLSPLG 868
           K TLKR+TG D E   +S         +G   S + +  + S   WGSS  A++ S  G
Sbjct: 402 KHTLKRLTGRDREWADNSQ--------SGWGSSRRAVDNSQS--GWGSSRRAVDNSQSG 450


>gb|ABR17075.1| unknown [Picea sitchensis]
          Length = 466

 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
 Frame = +2

Query: 149 PEPKVIENSESPITEEGPRNSN-LSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPA 325
           P    + +S+ P+   G   +    RS+STGHSLVRL KD+ ++ +TEW+IST +GLTP 
Sbjct: 248 PAASEMADSQEPLRVMGLNQAKKFRRSHSTGHSLVRLPKDL-DQSATEWYISTAEGLTPG 306

Query: 326 SHKTCTYAINQAMALHSKSQGYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSI 505
            H+ C+         HS+SQ      S+    P  +KQ S        +       +GS 
Sbjct: 307 LHRNCSLTARP----HSRSQRSLASKSR----PALAKQDSLRGAASFSEDAGTSSGTGSG 358

Query: 506 RRWYEKRFKSERDS-TEMDPANFRRSLSERTGVASDCVFNPEGYNPQSHEHQEDAAKAYI 682
            RWYE+  +SER S + M+P++F R+ SE    +         Y   S   Q++  KAY+
Sbjct: 359 LRWYERGLRSERLSLSSMNPSSFLRTHSEHRAPSY------SRYQDSSAGSQQE-QKAYL 411

Query: 683 LNLKKTLKRITGLDDESPSSS 745
            +LK TLKR+TG D E   +S
Sbjct: 412 QSLKSTLKRLTGRDREWTDNS 432


>gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN40931.1| unknown
           [Picea sitchensis]
          Length = 385

 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = +2

Query: 197 GPRNSNLSRSYSTGHSLVRLRKDMGEEKSTEWFISTPKGLTPASHKTCTYAINQAMALHS 376
           G + +  SRS+STGHSLVRLRK+M ++  TEW++ T +GL P  H+ C+     A++ HS
Sbjct: 263 GDQATEFSRSHSTGHSLVRLRKEM-DQSGTEWYVHTAEGLKPGLHRNCS---RNALS-HS 317

Query: 377 KSQGYNIGASKFSRFPFFSKQLSFVRDGGQQQQTAELQNSGSIRRWYEKRFKSER-DSTE 553
           +SQG +   ++    P  SKQ S   +    Q T      GS RRWYE+  +SER   + 
Sbjct: 318 RSQGPSTSETR----PALSKQTSKNGNASCSQDT-----GGSGRRWYERGLRSERLTISS 368

Query: 554 MDPANFRRSLSERTGVA 604
           M P++F RS SE    A
Sbjct: 369 MYPSSFLRSFSEHRAPA 385


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