BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010810
         (2466 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...   446   e-122
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...   437   e-119
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...   437   e-119
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        434   e-119
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...   432   e-118
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]           431   e-118
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        431   e-118
ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selag...   426   e-116
ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Sela...   426   e-116
ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi...   424   e-116
ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Sela...   424   e-116
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   423   e-115
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]       421   e-115
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   421   e-115
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   421   e-114
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...   420   e-114
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...   411   e-112
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   408   e-111
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...   408   e-111
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   408   e-111

>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score =  446 bits (1148), Expect = e-122
 Identities = 213/358 (59%), Positives = 279/358 (77%), Gaps = 1/358 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSYVPNYNPRD+ AN++ LLN E + PM+PWYKGFKGTIE +ATK+ GV YT++G
Sbjct: 848  IGTGWSSYVPNYNPRDVAANVKRLLNGESMLPMEPWYKGFKGTIEKSATKEGGVGYTVSG 907

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            I+EE+N TTLRI ELPIR+WT+DYK +LE L TG++K KEPFI DYKE++T+ RV+F+V 
Sbjct: 908  IVEEINETTLRITELPIRRWTEDYKVYLESLRTGSEKTKEPFIVDYKEHNTDTRVHFDVL 967

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L EENM I++QEGL+K F+LTTTISTSNMHLF+ +G+I+K+DTPEQIL+EFF +R ++Y 
Sbjct: 968  LPEENMKISQQEGLMKMFKLTTTISTSNMHLFNAKGVIKKYDTPEQILEEFFHLRLDYYG 1027

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL++L+NK RFILGVVNGEI+V+ RKR +L  ELR KGFTP  K  K 
Sbjct: 1028 KRKKVLLDNLELELLKLDNKARFILGVVNGEIVVSKRKRADLVLELRDKGFTPFPKKSKN 1087

Query: 723  LEEAATAGAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGE 899
            +E A      V E  E+ P +DD   +  DY+YL+SM IG+LT+E+VQ L  E+D+ E +
Sbjct: 1088 VEAALAGATPVDEEGEESPEVDDRGINASDYDYLLSMAIGTLTIEKVQELCAEKDKLEHD 1147

Query: 900  VVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAARVFKLVPKHQR 1073
            V EL+  TP++LW KDLD F+ +LD     EA +DE ELN+M ++AA++F+ V K+ R
Sbjct: 1148 VKELRGLTPKALWIKDLDAFLAQLDAEAVQEAKDDEYELNNMVSDAAKIFRQVGKNPR 1205


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score =  437 bits (1123), Expect = e-119
 Identities = 218/362 (60%), Positives = 276/362 (76%), Gaps = 5/362 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TG
Sbjct: 835  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTG 894

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEVN TTLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVF
Sbjct: 895  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVF 950

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE+M   +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYE
Sbjct: 951  LSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYE 1010

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK +L++LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K 
Sbjct: 1011 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKS 1070

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
            +E          E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV
Sbjct: 1071 IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1130

Query: 903  VELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKH 1067
             +L+K TP SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+
Sbjct: 1131 DDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKN 1190

Query: 1068 QR 1073
             R
Sbjct: 1191 AR 1192


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score =  437 bits (1123), Expect = e-119
 Identities = 218/362 (60%), Positives = 276/362 (76%), Gaps = 5/362 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TG
Sbjct: 835  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTG 894

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEVN TTLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVF
Sbjct: 895  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVF 950

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE+M   +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYE
Sbjct: 951  LSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYE 1010

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK +L++LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K 
Sbjct: 1011 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKS 1070

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
            +E          E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV
Sbjct: 1071 IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1130

Query: 903  VELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKH 1067
             +L+K TP SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+
Sbjct: 1131 DDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKN 1190

Query: 1068 QR 1073
             R
Sbjct: 1191 AR 1192


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  434 bits (1116), Expect = e-119
 Identities = 236/444 (53%), Positives = 296/444 (66%), Gaps = 3/444 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TG
Sbjct: 647  IGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITG 706

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV 
Sbjct: 707  IIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVI 762

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYE
Sbjct: 763  LTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYE 822

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K 
Sbjct: 823  KRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKT 882

Query: 723  LEEAATAGA--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            + E A AGA     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + 
Sbjct: 883  V-EVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQ 941

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQR 1073
            EV +L+K TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R
Sbjct: 942  EVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPR 1001

Query: 1074 TIKXXXXXXXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXXXXXX 1253
             I                ++  SS++ TA T P                           
Sbjct: 1002 KINKKEKNAETVTETTDISS--SSAMETAETAPAAVKPKGRGGSRKAKKDDSDDDDDEDF 1059

Query: 1254 XXXXXGLQQNRLAAYNEDSSPDGS 1325
                    + RLA YN DSSPD S
Sbjct: 1060 GIPDL---RERLAKYNLDSSPDHS 1080


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score =  432 bits (1111), Expect = e-118
 Identities = 218/362 (60%), Positives = 276/362 (76%), Gaps = 5/362 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GF+GTIE TA+K++GVTYT+TG
Sbjct: 835  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTASKEAGVTYTVTG 894

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEVN TTLRI ELPIR+WTQDY+EFLE ++  ND     FIR +++YS +  V FEVF
Sbjct: 895  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVF 950

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE+M   +QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF IR EFYE
Sbjct: 951  LSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYE 1010

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK +L++LE EL++LENKVRFILGVVNGEI+VNNRKR +L  ELRQKGFTP  K+ K 
Sbjct: 1011 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKS 1070

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
            +E          E +E++P + +     DY+YL+SM IG+LTLE+VQ LL +RD+   EV
Sbjct: 1071 IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1130

Query: 903  VELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKEL-----NSMNAEAARVFKLVPKH 1067
             +L+K TP SLW KDLD   ++LD L++ +A  +E+ +      + +A    V K  PK+
Sbjct: 1131 DDLRKATPESLWVKDLDALDMQLD-LDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKN 1189

Query: 1068 QR 1073
             R
Sbjct: 1190 AR 1191


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/362 (60%), Positives = 274/362 (75%), Gaps = 3/362 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TG
Sbjct: 836  IGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITG 895

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV 
Sbjct: 896  IIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVI 951

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYE
Sbjct: 952  LTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYE 1011

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K 
Sbjct: 1012 KRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKT 1071

Query: 723  LEEAATAGA--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            + E A AGA     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + 
Sbjct: 1072 V-EVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQ 1130

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQR 1073
            EV +L+K TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R
Sbjct: 1131 EVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPR 1190

Query: 1074 TI 1079
             I
Sbjct: 1191 KI 1192


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/362 (60%), Positives = 274/362 (75%), Gaps = 3/362 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN E +EPM PWY+GFKG IE TA+K++GVTYT+TG
Sbjct: 836  IGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTASKEAGVTYTITG 895

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TGND    PFI+++++YS +  V FEV 
Sbjct: 896  IIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQYSDDTTVEFEVI 951

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD +G+I+K+DTPEQIL+EFF +RFEFYE
Sbjct: 952  LTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYE 1011

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL+++ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K  K 
Sbjct: 1012 KRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKT 1071

Query: 723  LEEAATAGA--QVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            + E A AGA     ET E+           DY+YL+SM IGSLTLE+VQ L  +RD+ + 
Sbjct: 1072 V-EVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQ 1130

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAA-RVFKLVPKHQR 1073
            EV +L+K TP+SLW KDLD   ++LD  ++   +E+  +L     EA  R  +  PK  R
Sbjct: 1131 EVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPR 1190

Query: 1074 TI 1079
             I
Sbjct: 1191 KI 1192


>ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
            gi|300159507|gb|EFJ26127.1| hypothetical protein
            SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score =  426 bits (1094), Expect = e-116
 Identities = 202/323 (62%), Positives = 260/323 (80%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWS++VPNYNPRDIV N++HLL +EPLEPMDPWYKGFKGTI  +A+K+SGV+YT+TG
Sbjct: 827  IGTGWSTFVPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGVSYTVTG 886

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            I+E+VN TT+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ 
Sbjct: 887  IVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEIS 946

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE M  A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y 
Sbjct: 947  LSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYV 1006

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRK+ ++++L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K 
Sbjct: 1007 KRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKA 1066

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
             +     G       +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V
Sbjct: 1067 SDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDV 1126

Query: 903  VELKKTTPRSLWDKDLDEFILEL 971
             ELKK TP+ LW+KDLD F+ +L
Sbjct: 1127 EELKKCTPKDLWEKDLDNFLEQL 1149


>ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
            gi|300137231|gb|EFJ04283.1| hypothetical protein
            SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score =  426 bits (1094), Expect = e-116
 Identities = 202/323 (62%), Positives = 260/323 (80%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWS++VPNYNPRDIV N++HLL +EPLEPMDPWYKGFKGTI  +A+K+SGV+YT+TG
Sbjct: 656  IGTGWSTFVPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGVSYTVTG 715

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            I+E+VN TT+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ 
Sbjct: 716  IVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEIS 775

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE M  A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y 
Sbjct: 776  LSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYV 835

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRK+ ++++L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K 
Sbjct: 836  KRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKA 895

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
             +     G       +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V
Sbjct: 896  SDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDV 955

Query: 903  VELKKTTPRSLWDKDLDEFILEL 971
             ELKK TP+ LW+KDLD F+ +L
Sbjct: 956  EELKKCTPKDLWEKDLDNFLEQL 978


>ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi|162679677|gb|EDQ66121.1|
            predicted protein [Physcomitrella patens]
          Length = 1172

 Score =  424 bits (1091), Expect = e-116
 Identities = 204/324 (62%), Positives = 261/324 (80%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSS+VPNYNPR+IVAN+R LL  + +EPM PWYKGFKG+IE +ATKDSG TYT+TG
Sbjct: 839  IGTGWSSFVPNYNPREIVANLRRLLAGQEMEPMHPWYKGFKGSIECSATKDSGFTYTITG 898

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
             I++++ TT++I ELP+RKWTQDYKEFL+V+MT +DK KEPFI+D++E++T+ +V+FE+ 
Sbjct: 899  AIDQIDETTIKISELPVRKWTQDYKEFLDVMMTPSDKNKEPFIKDFREHNTDTKVHFELS 958

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEENM IA  EGL+KKF+LTTTISTSNMHLFD +GII+K+DTPEQIL+EFF IR + Y 
Sbjct: 959  LSEENMAIALAEGLVKKFKLTTTISTSNMHLFDNKGIIKKYDTPEQILEEFFHIRLDMYV 1018

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRK  +LQ+LE+EL +++NKVRFILGVV GEIIVNNRKR +L A+L++KGFTP  K  K 
Sbjct: 1019 KRKAVQLQNLEYELHKVDNKVRFILGVVKGEIIVNNRKRADLLADLQKKGFTPFPKKSKS 1078

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
             +        + E +E D  +       DYEYL+SMPIG+LT E+VQ L  +RD+ EGEV
Sbjct: 1079 SDPPVVGADPLPEDDEQDEKVKGIR-AADYEYLLSMPIGTLTFEKVQQLRGQRDKMEGEV 1137

Query: 903  VELKKTTPRSLWDKDLDEFILELD 974
             ELKK TP +LW KDLDEF+++LD
Sbjct: 1138 EELKKATPEALWIKDLDEFLVKLD 1161


>ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
            gi|300144129|gb|EFJ10815.1| hypothetical protein
            SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score =  424 bits (1090), Expect = e-116
 Identities = 202/323 (62%), Positives = 259/323 (80%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWS++VPNYNPRDIV N++HLL +E LEPMDPWYKGFKGTI  +ATK+SGV+YT+TG
Sbjct: 827  IGTGWSTFVPNYNPRDIVTNLKHLLRDEQLEPMDPWYKGFKGTIVKSATKESGVSYTVTG 886

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            I+E+VN TT+R+LELPIRKWTQDYKEFLE L+ G +KIKEP I+DY+E++T+ RV+FE+ 
Sbjct: 887  IVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEIS 946

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEE M  A  EGL KKF+L+TTISTSNM+LFD+ G I+K+DTPEQIL++F+ IR E Y 
Sbjct: 947  LSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYV 1006

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRK+ ++++L++EL++L+NKVRFILGVV GEI+VNNRKR EL  EL+ KGFTP  K  K 
Sbjct: 1007 KRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKA 1066

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
             +     G       +D+  L+      DYEYL+SMPIG+LTLE+VQ L +ERD+ EG+V
Sbjct: 1067 SDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDV 1126

Query: 903  VELKKTTPRSLWDKDLDEFILEL 971
             ELKK TP+ LW+KDLD F+ +L
Sbjct: 1127 EELKKCTPKDLWEKDLDNFLEQL 1149


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  423 bits (1088), Expect = e-115
 Identities = 210/350 (60%), Positives = 266/350 (76%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSS+VPNYNPR+IVANIR LL  + L PM PWYK F GTIE +ATKD G+TYT+TG
Sbjct: 840  IGTGWSSFVPNYNPREIVANIRRLLAGQELTPMHPWYKSFMGTIECSATKDIGLTYTITG 899

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
             IE+++ TT++ILELP+RKWTQDYKEFL+ LMT +DK KEPFI+D++E++T+ +V+FE+ 
Sbjct: 900  TIEQIDETTIKILELPVRKWTQDYKEFLDALMTPSDKNKEPFIKDFREHNTDTKVHFELT 959

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            LSEENM IA  EGL+KKF+LTTTISTSNMHLFD +GII+K+DTPEQIL+EFF IR + Y 
Sbjct: 960  LSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAKGIIKKYDTPEQILEEFFHIRLDLYV 1019

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRK  +LQ+L++ELV+++NKVRFILGVV GEIIVNNRKR +L +EL+ KGF P  K  K 
Sbjct: 1020 KRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIVNNRKRIDLLSELQHKGFAPFPKKAKS 1079

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
             +        + E NE D  +     + DY+YL+SMPIGSLT E+VQ L  +RD+ E EV
Sbjct: 1080 PDPPVVGADPLPEDNEQDEKV-KGVKVADYDYLLSMPIGSLTYEKVQQLRGQRDKMEEEV 1138

Query: 903  VELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNSMNAEAARVFK 1052
             ELK+ TP +LW KDLDEF+++LD  E  EA +   E      E  + FK
Sbjct: 1139 EELKRATPEALWIKDLDEFLVKLDAQEEQEAIDAVYEAKHSAKEGNQTFK 1188


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
          Length = 1467

 Score =  421 bits (1082), Expect = e-115
 Identities = 214/366 (58%), Positives = 273/366 (74%), Gaps = 6/366 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LL+ + + PMDPWY+GF GTIE T  K+SGV+YT  G
Sbjct: 806  IGTGWSSYIPNYNPRDIVANVRRLLDGDAMVPMDPWYRGFTGTIEKTV-KESGVSYTACG 864

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEV+ T+LRI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V 
Sbjct: 865  IIEEVSETSLRISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGFTQHSDHSTVDIIVH 924

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L EE +  A+QEGLLKKF+LTT+ISTSNMHLFDR+G+I+K+DTPEQIL++FF +R EFYE
Sbjct: 925  LREEKLMAAKQEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQILEDFFHLRLEFYE 984

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L+ LE EL++LENKVRFILGVVNGEIIV+NRKR +L  EL+QKGFTP  K  K 
Sbjct: 985  KRKKVLLEDLELELLKLENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKA 1044

Query: 723  LEEAATAGAQVGETNED--DPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            LE       +  E  E+  + +++    + DYEYL+SM IG+LT+ERVQ+LL +RD+   
Sbjct: 1045 LEPEVAGATENTEDAEENSEAAIEKGARISDYEYLISMAIGTLTIERVQALLADRDKANA 1104

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNS----MNAEAARVFKLVPK 1064
            EV EL+K+TPRSLW KDLD   +ELD LE+ EA  +E +  +     N  A++  K  PK
Sbjct: 1105 EVDELRKSTPRSLWLKDLDALEMELDVLEKSEALAEEAKKKARTQVKNVPASKASKQAPK 1164

Query: 1065 HQRTIK 1082
             ++  K
Sbjct: 1165 PRKNTK 1170


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  421 bits (1082), Expect = e-115
 Identities = 232/449 (51%), Positives = 292/449 (65%), Gaps = 8/449 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHT-ATKDSGVTYTLT 179
            IGTGWSS +PNYNPRDI+AN+R LLN E +EPMDPWY+GF+GTIE T  TK   V YT+ 
Sbjct: 839  IGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDPTKQESVGYTVK 898

Query: 180  GIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEV 359
            GIIEEVN TTLRI ELP+RKWTQDYKEFLE +MTGNDKIK+PFI+DYKE++ +  V+FEV
Sbjct: 899  GIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHNDDTTVHFEV 958

Query: 360  FLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFY 539
             +SEEN+ +A+QEGLL+KF+LTT ISTSNMHLFD  G I+K++TPEQIL+EFF +R EFY
Sbjct: 959  IMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQILEEFFHLRLEFY 1018

Query: 540  EKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRK 719
            EKRK+  L +LE EL++LENKVRFILGVV GEIIV+NRKR +L  EL QKGFTP  K  K
Sbjct: 1019 EKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQKGFTPFPKKSK 1078

Query: 720  ELEEAATAGAQVGETNEDDPSLDDNNDLK--DYEYLMSMPIGSLTLERVQSLLDERDRKE 893
             +E A        E  E++        ++  DYEYL+SM IG+LTLE+VQ L  +RD+  
Sbjct: 1079 SVEIAVAGATDDTEEAEENTDAVSKGGVRATDYEYLLSMAIGTLTLEKVQELCADRDKLN 1138

Query: 894  GEVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDE--KELNS--MNAEAARVFKLVP 1061
              V +LKK TP++LW  DLD    ELD  ++ +A  +E  K+L S  M+    +V +  P
Sbjct: 1139 KGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAGMKVSRQAP 1198

Query: 1062 KHQRTIKXXXXXXXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXX 1241
            K+ R  K                   SS++   +    V                 M   
Sbjct: 1199 KNPR--KNNKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAPAKKKEMPTS 1256

Query: 1242 XXXXXXXXXGLQ-QNRLAAYNEDSSPDGS 1325
                       + + RLAAYN +SSPDGS
Sbjct: 1257 VLKDEDDDEVHELKERLAAYNLESSPDGS 1285


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  421 bits (1081), Expect = e-114
 Identities = 210/362 (58%), Positives = 269/362 (74%), Gaps = 2/362 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSYVPNYNPRD+VAN+R LLN+EP+EPMDPWYKGFKGTIE TATK++G TYT+TG
Sbjct: 835  IGTGWSSYVPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTATKEAGATYTVTG 894

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEVN TTLRI ELP+R+WT+DYK+FLE +   NDK K+PFI++ + Y   N V FEV 
Sbjct: 895  IIEEVNETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEVRAYGDENSVCFEVI 954

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            +SEEN+ +A+QEGLLKKF+L TTISTSNMHLFD  G I+K+D PE IL+EF+ +R E+YE
Sbjct: 955  MSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNPEDILEEFYHVRLEYYE 1014

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKKA L+ LE EL+R+ENKV+FILGVV  EIIVNNRKR +L  EL++KGFTP  K  K+
Sbjct: 1015 KRKKALLEILELELLRIENKVKFILGVVKVEIIVNNRKRADLLLELKEKGFTPFPK--KK 1072

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGEV 902
              EA  A     +  + +  L+      DY+YL+SMPIG+LTLE+VQ L  ERD+  GEV
Sbjct: 1073 AVEAVVADTS-DDAEDSEEELNRGVRAGDYDYLLSMPIGTLTLEKVQELCAERDQLNGEV 1131

Query: 903  VELKKTTPRSLWDKDLDEFILELDNLER--IEASEDEKELNSMNAEAARVFKLVPKHQRT 1076
             +++  TP+ LW KDLD    +LD  ++  I+A E  +++      AA +    PK ++ 
Sbjct: 1132 EDMRNATPKLLWLKDLDVLEKQLDEQDKIDIQAEEAREKIKKKVMNAAGLKAPKPKPRKN 1191

Query: 1077 IK 1082
            +K
Sbjct: 1192 VK 1193


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score =  420 bits (1080), Expect = e-114
 Identities = 236/455 (51%), Positives = 295/455 (64%), Gaps = 8/455 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYN RDIVAN+R LLN E + PMDPWY+GF GTIE T  K+SGV+YT+ G
Sbjct: 842  IGTGWSSYIPNYNTRDIVANVRRLLNGEAMVPMDPWYRGFSGTIEKTV-KESGVSYTVCG 900

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            +IEE N TT+RI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V 
Sbjct: 901  VIEEGNETTVRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDHSTVDIIVH 960

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L EEN+  ARQEGLLKKF+LTT+ISTSNMHLFD +G+I+K+DTPEQIL+EFF +R EFYE
Sbjct: 961  LPEENLMAARQEGLLKKFKLTTSISTSNMHLFDPKGVIKKYDTPEQILEEFFHLRLEFYE 1020

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL++LENKVRFIL VVNGEIIV+NR+R +L  EL+QKGFTP  K  K 
Sbjct: 1021 KRKKVLLDNLEMELLKLENKVRFILAVVNGEIIVSNRRRADLFLELQQKGFTPFPKKTKA 1080

Query: 723  LE-EAATAGAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
             E E A A     ET E+  S   N   + DYEYL+SM IG+LT+ERVQ+L  +RD+   
Sbjct: 1081 QEPEVAGAIEDTEETEENSESASGNGARISDYEYLISMAIGTLTIERVQALCADRDKVNN 1140

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNS----MNAEAARVFKLVPK 1064
            EV EL+ +TPRSLW KDLD   +EL  LE+ EA  +E +  S     NA AA+V +  PK
Sbjct: 1141 EVAELRNSTPRSLWLKDLDALEMELGELEKSEALAEEAKKKSRNQVKNAPAAKVSRPAPK 1200

Query: 1065 HQRTIKXXXXXXXXXXXXXXXTTQPSSSLATANTQPDVXXXXXXXXXXXXXXXXXMXXXX 1244
            + R  K                T  SS +      P++                      
Sbjct: 1201 NPR--KNNKKANNAEAAAESRETS-SSFVFEMEKAPEIVKRKVGAVAKKAPAGKKQAKSA 1257

Query: 1245 XXXXXXXXGLQQ--NRLAAYNEDSSPDGSVGNGSD 1343
                     + +  +RLAAYN DSSP+ S G  ++
Sbjct: 1258 VVLSDDDDEVLELKDRLAAYNLDSSPENSAGKETE 1292


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score =  411 bits (1057), Expect = e-112
 Identities = 213/367 (58%), Positives = 270/367 (73%), Gaps = 7/367 (1%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSY+PNYNPRDIVAN+R LLN + + PMDPWY+GF G IE T  K++G +YT  G
Sbjct: 839  IGTGWSSYIPNYNPRDIVANVRRLLNGDEMVPMDPWYRGFTGFIEKTV-KETGTSYTACG 897

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEVN TTLRI ELPIR+WTQDYKEFLE +  GNDK K+PFI  + ++S ++ V   V 
Sbjct: 898  IIEEVNETTLRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQHSDHSTVEILVH 957

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            L EEN+  AR+EGLLKKFRLTT+I+T+NMHLFD +G+I+K+DT EQIL+EFF +R EFYE
Sbjct: 958  LPEENLMAARKEGLLKKFRLTTSIATTNMHLFDPKGVIKKYDTAEQILEEFFPLRLEFYE 1017

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L +LE EL+++ENKVRFILGVVNGEIIV+NRKR +L  EL+QKGFTP  K  K 
Sbjct: 1018 KRKKVLLDNLELELLKMENKVRFILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKS 1077

Query: 723  LE-EAATAGAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            +E E A A     ET E+  ++  N   + DYEYL+SM IG+LT+ERV++LL +RD+   
Sbjct: 1078 VEPEVAGATEDTEETEENSETVISNGVRISDYEYLISMAIGTLTIERVEALLADRDKVNE 1137

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDEKELNS-----MNAEAARVFKLVP 1061
            +V +L+ +TP+SLW KDLD    EL+ LE+ EA  DE +  S      NA   +V K  P
Sbjct: 1138 QVNDLRGSTPKSLWLKDLDVLEAELNELEKSEALADEAKRKSRNNQIKNAPVGKVSKQAP 1197

Query: 1062 KHQRTIK 1082
            K ++  K
Sbjct: 1198 KPRKNTK 1204


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score =  408 bits (1048), Expect = e-111
 Identities = 198/337 (58%), Positives = 256/337 (75%), Gaps = 2/337 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSYVPNYNPRD+VAN+R LLN+E +EPMDPWYKGFKGTIE TATK++G TYT+TG
Sbjct: 836  IGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGTIEKTATKETGATYTVTG 895

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEE + TTLRI ELP+R+WT+DYK+FLE +    DK K+ FI++ + Y   N V FEV 
Sbjct: 896  IIEEFSETTLRISELPVRRWTEDYKQFLESMTVSTDKSKDAFIKEVRAYGDENSVCFEVI 955

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            +SEEN+ +A+QEGLLKKF+LTTTISTSNMHLFD +G I+K+D PE+IL+EF+ +R E+YE
Sbjct: 956  MSEENLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYE 1015

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKK  L+ LE EL+R+ENKVRFILGVV GEIIVNNRKR +L  EL+ KGFTP  K +K 
Sbjct: 1016 KRKKTLLEILELELLRIENKVRFILGVVKGEIIVNNRKRADLLLELKNKGFTPFPK-KKP 1074

Query: 723  LEEAATAGAQVGETNEDDPSLDDNNDLK--DYEYLMSMPIGSLTLERVQSLLDERDRKEG 896
            +E          E +E+ P  + N  ++  DY+YL+SM IG+LTLE+VQ L  +RD+   
Sbjct: 1075 VEAVVADSTDDAEDSEESPE-ESNKGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNA 1133

Query: 897  EVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDE 1007
            EV +++  TP+ LW KDLD    +LD  ++++   +E
Sbjct: 1134 EVEDMRNATPKDLWMKDLDVLDKQLDEQDKLDIQTEE 1170


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score =  408 bits (1048), Expect = e-111
 Identities = 212/366 (57%), Positives = 265/366 (72%), Gaps = 9/366 (2%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWS+++PNYNPRDIVANIR LLN E +EPM+PWY+GFKGTIE  A+K++G +YT+ G
Sbjct: 853  IGTGWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEAGCSYTVNG 912

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGN-----DKIKEPFIRDYKEYSTNNRV 347
            +I EVN TTLRI ELPIR+WT DYK FL  +  GN     +  K+PFI+D+++Y  +  V
Sbjct: 913  VINEVNETTLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDPFIKDFRKYGDDATV 972

Query: 348  YFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIR 527
             FEV LSEENM IA+QEGLLKKF+LTTTISTSNMHLFD  G+I+K+D PEQIL+EFF +R
Sbjct: 973  VFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQILEEFFHLR 1032

Query: 528  FEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPIS 707
             E+YE+RKK  L++LEFEL++LENKVRFILGVV GEIIVNNRKR +L  EL QKGFTPI 
Sbjct: 1033 LEYYERRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLELHQKGFTPIP 1092

Query: 708  KSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLMSMPIGSLTLERVQSLLDERDR 887
            K  K    A  AGA   +   +D          DY+YL+SM IG+LTLE+VQ L  + D+
Sbjct: 1093 KKSK----AVVAGATDDKDEAEDSLEVSGVRASDYDYLLSMAIGTLTLEKVQQLCADHDK 1148

Query: 888  KEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEASEDE---KELNSMNAEAA-RVFKL 1055
              GEV  L+KTTP  LW KDL+   ++LD L++ +A  +E   K     N EA  +V K 
Sbjct: 1149 LNGEVDNLRKTTPIVLWVKDLEALEMQLDVLDKYDAEAEEARKKLKGDANGEAGFKVSKQ 1208

Query: 1056 VPKHQR 1073
             PK+ R
Sbjct: 1209 APKNPR 1214


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score =  408 bits (1048), Expect = e-111
 Identities = 204/363 (56%), Positives = 264/363 (72%), Gaps = 3/363 (0%)
 Frame = +3

Query: 3    IGTGWSSYVPNYNPRDIVANIRHLLNNEPLEPMDPWYKGFKGTIEHTATKDSGVTYTLTG 182
            IGTGWSSYVPNYNPRD+VAN+R LLN+E +EPMDPWYKGFKG IE TATK++G TYT+TG
Sbjct: 836  IGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGKIEKTATKETGATYTVTG 895

Query: 183  IIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTGNDKIKEPFIRDYKEYSTNNRVYFEVF 362
            IIEEV+ TTLRI ELP+R+WT+DYK+FLE +    DK K+ FI++ + Y   N V FEV 
Sbjct: 896  IIEEVSETTLRISELPVRRWTEDYKQFLESMTVSTDKAKDSFIKEVRAYGDENSVCFEVI 955

Query: 363  LSEENMNIARQEGLLKKFRLTTTISTSNMHLFDRRGIIQKFDTPEQILKEFFDIRFEFYE 542
            +SE+N+ +A+QEGLLKKF+LTTTISTSNMHLFD +G I+K+D PE+IL+EF+ +R E+YE
Sbjct: 956  MSEDNLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYE 1015

Query: 543  KRKKAKLQSLEFELVRLENKVRFILGVVNGEIIVNNRKRKELAAELRQKGFTPISKSRKE 722
            KRKKA L+ LE EL+R+ENKV+FILGVV GEIIVNNRKR EL  EL+ KGFTP  K +K 
Sbjct: 1016 KRKKALLEILELELLRIENKVKFILGVVKGEIIVNNRKRAELLLELKNKGFTPFPK-KKP 1074

Query: 723  LEEAATAGAQVGETNEDDPSLDDNN-DLKDYEYLMSMPIGSLTLERVQSLLDERDRKEGE 899
            +E          + +E+ P          DY+YL+SM IG+LTLE+VQ L  +RD+   E
Sbjct: 1075 VEAVVADSTDDADDSEESPEESSRGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAE 1134

Query: 900  VVELKKTTPRSLWDKDLDEFILELDNLERIEASEDE--KELNSMNAEAARVFKLVPKHQR 1073
            V +++  TP+ LW KDLD    +LD  ++I+   +E  ++L      AA      PK ++
Sbjct: 1135 VEDMRNATPKHLWMKDLDVLDKQLDEQDKIDIQTEEAREKLKKKVMNAAGKAAPKPKPRK 1194

Query: 1074 TIK 1082
            T K
Sbjct: 1195 TNK 1197