BLASTX nr result

ID: Ephedra25_contig00010580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010580
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18112.1| unknown [Picea sitchensis]                              45   9e-08
gb|ABR18096.1| unknown [Picea sitchensis]                              61   2e-07
ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13...    59   1e-06
emb|CBI23873.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|WP_022133282.1| miro domain protein [Clostridium sp. CAG:242...    57   4e-06
ref|YP_004531123.1| leucine Rich Repeat domain-containing protei...    56   5e-06

>gb|ABR18112.1| unknown [Picea sitchensis]
          Length = 642

 Score = 44.7 bits (104), Expect(2) = 9e-08
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = +2

Query: 29  WLTISQEYEVAKLQRTLATKARMQIRDTEDEEGFKMRLAEHLKIRKFL 172
           WLTISQ Y++ KLQ ++A    +++  + D +  KM+L+E L  +KFL
Sbjct: 218 WLTISQHYQIEKLQASIAETINLKLEGSSDHDLRKMKLSESLGKKKFL 265



 Score = 37.4 bits (85), Expect(2) = 9e-08
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = +1

Query: 160 QKVFMVLDDVWSEVFDVPKLGLVFGNENHDSKVVFTTRNKDVDPIIEGSVSILL------ 321
           +K  ++LDD+W  +  + ++G+ FG+ N  SKV+ ++R KDV   +E S    L      
Sbjct: 262 KKFLLILDDMWHPIDLINEVGVKFGDHN-CSKVLMSSRKKDVIVAMEASEDYSLRIQPLS 320

Query: 322 ----YEISRTRRL*RVHTSSGKQSIGQ*DKSRSSRLERLPI 432
               +E+ RTR     + +  + +I    K  +S  + LP+
Sbjct: 321 MEEGWELFRTRAF--TNGAVPRDNIEPIAKQMASECQGLPL 359


>gb|ABR18096.1| unknown [Picea sitchensis]
          Length = 966

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
 Frame = -1

Query: 554 MISLSLSVTK-INKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNLSSLELLDLSYC-PI 381
           ++SL LS  + + +VP GF + L SL+VL+            +G L  LELLDLS C  +
Sbjct: 551 LVSLVLSCNENLTEVPEGFLSNLASLRVLDLSKTSISSLPTSLGQLGQLELLDLSGCTSL 610

Query: 380 DCLPDEVCTLYNLRVLDISYS-KIETLPSMIG 288
             LP+ +C L+ L+ LD+ +  ++++LPSMIG
Sbjct: 611 KDLPESICNLHGLQFLDLGHCYELQSLPSMIG 642



 Score = 38.1 bits (87), Expect(2) = 7e-06
 Identities = 21/58 (36%), Positives = 37/58 (63%)
 Frame = +1

Query: 160 QKVFMVLDDVWSEVFDVPKLGLVFGNENHDSKVVFTTRNKDVDPIIEGSVSILLYEIS 333
           ++  +VLDDVWS +    ++G+ FG +N  SK++ ++R+KDV     GS+  L Y ++
Sbjct: 264 KRFLLVLDDVWSRINLRDEVGVRFGADNR-SKIIISSRSKDV----IGSMGALEYSMN 316



 Score = 37.4 bits (85), Expect(2) = 7e-06
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +2

Query: 29  WLTISQEYEVAKLQRTLATKARMQIRDTEDEEGFKMRLAEHLKIRKFL 172
           W T+SQ +++ +LQ ++A   ++ + +T   E  KMRL   L  ++FL
Sbjct: 220 WFTVSQNFQIKELQASIAKGLKLNLEETSTIEETKMRLYAALPKKRFL 267


>ref|XP_002273714.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1274

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
 Frame = -1

Query: 551 ISLSLSVTKINKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNLSSLELLDLSYCPIDCL 372
           + L+L     N+VPN   +++  L+VL+            IGNL  L  LDLSY  I+ L
Sbjct: 553 LPLNLGYLPSNRVPNDLLSKIQYLRVLSLSYYWIIDLPDTIGNLKHLRYLDLSYTSIERL 612

Query: 371 PDEVCTLYN------------------------LRVLDISYSKIETLPSMIG 288
           PD +C+LYN                        LR LDI +SK++ +PS +G
Sbjct: 613 PDSICSLYNLQTLILSFCCCLVELPVMMSKLIRLRHLDIRHSKVKEMPSQLG 664


>emb|CBI23873.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 24/112 (21%)
 Frame = -1

Query: 551 ISLSLSVTKINKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNLSSLELLDLSYCPIDCL 372
           + L+L     N+VPN   +++  L+VL+            IGNL  L  LDLSY  I+ L
Sbjct: 231 LPLNLGYLPSNRVPNDLLSKIQYLRVLSLSYYWIIDLPDTIGNLKHLRYLDLSYTSIERL 290

Query: 371 PDEVCTLYN------------------------LRVLDISYSKIETLPSMIG 288
           PD +C+LYN                        LR LDI +SK++ +PS +G
Sbjct: 291 PDSICSLYNLQTLILSFCCCLVELPVMMSKLIRLRHLDIRHSKVKEMPSQLG 342


>ref|WP_022133282.1| miro domain protein [Clostridium sp. CAG:242]
           gi|524320983|emb|CDA78514.1| miro domain protein
           [Clostridium sp. CAG:242]
          Length = 1064

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/97 (37%), Positives = 52/97 (53%)
 Frame = -1

Query: 560 SDMISLSLSVTKINKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNLSSLELLDLSYCPI 381
           S++ +L +    +  +P  F   LF+L+ L             +GNLS+L+ LD+S  P+
Sbjct: 288 SNLQTLDIIGNNLTSLPY-FLGNLFNLQALYIGRNNLTSLPDFLGNLSTLQTLDISDNPL 346

Query: 380 DCLPDEVCTLYNLRVLDISYSKIETLPSMIGSTSLFR 270
             LPD + +L NL  LDISY+KI  LPS I S    R
Sbjct: 347 SFLPDSLESLSNLESLDISYTKIVILPSWISSLKQLR 383


>ref|YP_004531123.1| leucine Rich Repeat domain-containing protein [Treponema primitia
           ZAS-2] gi|505822858|ref|WP_015708250.1| leucine Rich
           Repeat domain-containing protein [Treponema primitia]
           gi|333740423|gb|AEF85913.1| leucine Rich Repeat domain
           protein [Treponema primitia ZAS-2]
          Length = 805

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = -1

Query: 560 SDMISLSLSVTKINKVPNGFFTQLFSLKVLNXXXXXXXXXXXXIGNLSSLELLDLSYCPI 381
           +++ +L+L  T+I+ +      ++ SLK L+            IGNL+SL +LDLSY  I
Sbjct: 412 TNLTNLNLEGTEIDSLTESI-GKISSLKSLSLKKSKIKNLPNSIGNLASLAVLDLSYTNI 470

Query: 380 DCLPDEVCTLYNLRVLDISYSKIETLPSMIGS-TSLFRVVKT 258
           + LPD +  L  L +LD+ ++KI+ LP  IG+  +L++++ T
Sbjct: 471 ETLPDGITGLSALEILDLGHTKIKKLPDAIGTIPTLYKLILT 512


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