BLASTX nr result
ID: Ephedra25_contig00010081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00010081
(1834 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 236 3e-59
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 231 8e-58
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 229 2e-57
ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [A... 229 3e-57
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 228 7e-57
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 226 3e-56
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 224 7e-56
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 221 6e-55
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 220 1e-54
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 216 3e-53
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 216 3e-53
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 215 5e-53
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 215 6e-53
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th... 214 1e-52
ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thalian... 214 1e-52
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 213 2e-52
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 211 7e-52
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi... 211 7e-52
ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Popu... 211 9e-52
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 211 1e-51
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 236 bits (601), Expect = 3e-59
Identities = 183/681 (26%), Positives = 284/681 (41%), Gaps = 74/681 (10%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAK-PCLHFALTKESYLASKGHSHSFYSD 1658
KK H L+ N+ CD C Q+ + AK PCL F + + + S+ S
Sbjct: 977 KKGH-LSHLFKNITFSICD-CSFTQKLIDGKLAKVPCLQFFFPESNTMLSE----SVEGA 1030
Query: 1657 LYLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXX 1478
+ L+ D + L T +KGD RI+ +I W ++ +WV + K +
Sbjct: 1031 VNLLADSVCGVLLNTIIKGDPRIQEAKIVWVGSDATSWVKNTK--KESKGEPAVEIIVEE 1088
Query: 1477 XXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALEL 1298
GD+W + + +P ++L+D R IPY + ++ +LLG++ A+ ++QRL+ + +
Sbjct: 1089 QEALHTGDSWRITMDACIPVLDLIDTRRSIPYGIQQLRELLGISCAFDQVVQRLSTTVRM 1148
Query: 1297 LGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAA 1118
+ K K+HL+L+A+ MT TG + +N AG+K + S+K VPFTE TL TP+K FE+AA
Sbjct: 1149 VAKDVLKDHLVLVANSMTFTGNLNGFNTAGYKTTFRSLKVQVPFTESTLITPMKCFEKAA 1208
Query: 1117 EEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLG 938
E+ D L V+SC WGK A GTGS+F+I W E K +E + L Y+ L ++
Sbjct: 1209 EKCHSDSLGCVVSSCSWGKYAASGTGSSFQILWN--ESQLKSNKEYGDGL--YDYLALVR 1264
Query: 937 VDSEGEKVK--PSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRN-KQSNFGRNKPA 767
D E + + E+ + DVCL G+I G +F N ++ +F +N
Sbjct: 1265 TDEEKARYTFFDDVDYLAEENETDVCLSPELEGTI-----GQPTFDDNLEEQDFQKN--- 1316
Query: 766 MDQDTSCWNQQQATNGDGPDWNLPSSAADDV----GWNKPASNGDGAAWNQPTSVTEDVA 599
+ W A NG W SA DD GWN A D A Q E
Sbjct: 1317 -----NSWENGTAANG---SWEQNGSAGDDSDKWGGWNAAAVGADTAVTKQADQ--EKSC 1366
Query: 598 WSKPA----SNGDGADW---------NQPNQPTSATE----------DVGWGKPVS---- 500
W PA S+ D W N P +P D+ WGK S
Sbjct: 1367 WDVPAAVEKSSSDWGGWGTEKRKVKENLPEEPAEHDAWLAKRSMDGGDINWGKQPSISDE 1426
Query: 499 ---NGDGADWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIG---------WNQTA 356
N D W + +AE+ W K +G D +W K ++ +D G W +
Sbjct: 1427 FKKNVDQGSWGNMSLSAENRAWDKKKPDGGD-ATWNKQSSTQNDGGDTWEKQPSAWKENK 1485
Query: 355 AAPEDDAGWTQA---KPNAANNSVPDSVDWKQTTVPKDDAGWSQPEPNTEKTSATEWNNQ 185
+ W ++ K + N+ ++ + KQ T W + T W
Sbjct: 1486 GRGSNGGSWEKSNSQKGSWGNDEAHNNANMKQDT-------WGSVTAHNNDTQNKSWGTV 1538
Query: 184 SVSHRSEDDAGWKQTIAPEDDGSWKQTTAAEDD-----------AGWSQPETN------- 59
+ + W IA D +W ++ + GW+ +
Sbjct: 1539 DAKANTSTEKSWGNVIASPSDNAWNAAPVSQGNENSDAKQPGSWEGWNSARADDSSTKDK 1598
Query: 58 ------AAKSSASEWNAQSVT 14
AA S + WNA V+
Sbjct: 1599 EPWGNVAASPSFNAWNAAPVS 1619
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 231 bits (589), Expect = 8e-58
Identities = 178/623 (28%), Positives = 272/623 (43%), Gaps = 16/623 (2%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAK-PCLHFALTKESYLASKGHSHSFYSD 1658
KK H N F N+ CD C Q+ + K PCL F ++ + S S
Sbjct: 1032 KKGHLSNLF-KNITFSTCD-CLFTQKLVDGKLPKLPCLQFFVSDNMIV-----SESVERA 1084
Query: 1657 LYLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXX 1478
+ ++ D L L T +KGD RI+ +I W ++ +WV K +
Sbjct: 1085 VSVLADSLCGVLLNTIIKGDPRIQEAKIVWVGSDATSWV--KNTQKASKGEPAVEIIVEE 1142
Query: 1477 XXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALEL 1298
GDAW + + +P + L+D R IPY + +V +LLG++ A+ ++QRL+ + +
Sbjct: 1143 EEALHIGDAWRTTMDACIPVLNLIDIRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVRM 1202
Query: 1297 LGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAA 1118
+ K K+HL+L+A+ MT TG + +N AG+K + S+K VPFTE TL TP+K FE+AA
Sbjct: 1203 VAKDVLKDHLVLVANSMTFTGNLNGFNNAGYKATFRSLKVQVPFTESTLITPMKCFEKAA 1262
Query: 1117 EEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLG 938
E+ D L V+SC WGK A GTGS+F+I W E K +E + L Y+ L ++
Sbjct: 1263 EKCHSDSLGCVVSSCSWGKHAASGTGSSFQILWN--ESQLKSNKEYGDGL--YDYLALVR 1318
Query: 937 VDSEGEKVK--PSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAM 764
D E + + E+ + DVCL +G+I G F N + +N +
Sbjct: 1319 TDEEKARYTFFDDVDYLAEENEADVCLSPELDGTI-----GQPIFDDNLEEQDVQNNSSW 1373
Query: 763 DQDT---SCWNQQQATNGDGPDWN--LPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVA 599
D T + W Q + D W ++A D G KPA+ G+ + W+ P +V
Sbjct: 1374 DNGTTTNASWEQNGSAGNDSDKWGGWNDAAAGADTGVTKPANQGN-SCWDVPATV----- 1427
Query: 598 WSKPASNGDGADWNQPNQPTSATEDV----GW---GKPVSNGDGADWSQQTSAAED-VGW 443
K +S+ G + + +E+ W G + GA W +Q+S D W
Sbjct: 1428 -EKSSSDWGGWGTEKAKEKEKISEEPAQHDAWSVQGPKRATDGGASWKKQSSTQNDGNSW 1486
Query: 442 SKPAGNGDDGGSWKKPTTNGDDIGWNQTAAAPEDDAGWTQAKPNAANNSVPDSVDWKQTT 263
+ G G +GGSW+K G A +D + AA+ W T
Sbjct: 1487 KENKGRGSNGGSWEKDNAQKGSWGRGNDEAENNNDVQNKSWETVAADAHASTEKSWGNVT 1546
Query: 262 VPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDDAGWKQTIAPEDDGSWKQTTAAEDDA 83
D WS ++ N S + +S+ GWK G K ++
Sbjct: 1547 ASPSDNAWS-------AAPVSQGNGSSDTKQSDSWDGWKSA------GVDKAINKDKESL 1593
Query: 82 GWSQPETNAAKSSASEWNAQSVT 14
G A S S WNA V+
Sbjct: 1594 G-----NVPASPSFSAWNASPVS 1611
Score = 62.4 bits (150), Expect = 6e-07
Identities = 93/450 (20%), Positives = 160/450 (35%), Gaps = 68/450 (15%)
Frame = -1
Query: 1171 PFTEGTLKTPIKSFERAAEEGVVDRLS----GSVASCCWGKRAPVGTGSNFEIFWKDLE- 1007
P +GT+ PI F+ EE V S G+ + W + G S+ W D
Sbjct: 1347 PELDGTIGQPI--FDDNLEEQDVQNNSSWDNGTTTNASWEQNGSAGNDSDKWGGWNDAAA 1404
Query: 1006 ----GISKPLEEQCNELDAYETLEVLGVDSEG---EKVKPSSLCIGEDMDMDVCL----- 863
G++KP + + D T+E D G EK K E D
Sbjct: 1405 GADTGVTKPANQGNSCWDVPATVEKSSSDWGGWGTEKAKEKEKISEEPAQHDAWSVQGPK 1464
Query: 862 QSLTNGSIFGNKAGTDSFPRNKQSNFGR--NKPAMDQDTSCWNQQQATNGDGPDWNLPSS 689
++ G+ + ++ T + + + N GR N + ++D N Q+ + G G D ++
Sbjct: 1465 RATDGGASWKKQSSTQNDGNSWKENKGRGSNGGSWEKD----NAQKGSWGRGNDEAENNN 1520
Query: 688 AADDVGWNKPASNGDGA---AWNQPTSVTEDVAWSK-PASNGDGAD----------WNQP 551
+ W A++ + +W T+ D AWS P S G+G+ W
Sbjct: 1521 DVQNKSWETVAADAHASTEKSWGNVTASPSDNAWSAAPVSQGNGSSDTKQSDSWDGWKSA 1580
Query: 550 --------------NQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAG----- 428
N P S + PVS G+ ++Q+ + + GW K AG
Sbjct: 1581 GVDKAINKDKESLGNVPASPSFSAWNASPVSQGNERSDAKQSDSWD--GW-KSAGVDKAI 1637
Query: 427 NGDDGGSWKKPTTNGDDIGWNQTAAAPEDDA-------GWTQAKPNAANNSVPDSVDWKQ 269
N D P + WN + ++ W K ++SV D W
Sbjct: 1638 NKDKESLGNVPASPSFS-AWNAAPVSQGNERLDAKQSDSWDGWKSAGVDDSVKDKESWGN 1696
Query: 268 TTVPKDDAGW-----SQPEPNTEKTSATEWNNQSVS----HRSEDDAGWKQTIAPEDDGS 116
D+ W SQ +++ + W+ + ++D W A D +
Sbjct: 1697 VPASPSDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSA 1756
Query: 115 WKQTTAAEDDAGWSQPETNAAKSSASEWNA 26
W ++ D W+ E N +++ +W +
Sbjct: 1757 WNAAPVSQGDDVWNSAEANESRN--KDWKS 1784
>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Brachypodium
distachyon]
Length = 1935
Score = 229 bits (585), Expect = 2e-57
Identities = 175/641 (27%), Positives = 291/641 (45%), Gaps = 37/641 (5%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAK--PCLHFALTKESYLASKGHSHSFYS 1661
KK H L + CD C Q+ DG PCL F+ +++ + S+ +
Sbjct: 957 KKGH-LGHLFKKITFSTCD-CSFTQKPMIDGKLPKVPCLQFSFSEDIPMLSESVERA--- 1011
Query: 1660 DLYLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRN-KXXXXXXXXXX 1484
+ ++ + L L +T +KGD RI+ +I W ++++WV K TR
Sbjct: 1012 -VSVLANSLCDVLLDTIIKGDPRIQEAKIMWVGSDAQSWV---KNTRKVSKGEPTVEIVV 1067
Query: 1483 XXXXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLAL 1304
+++GDAW A+ + +P ++L+D R IPY + +V +LLG++ ++ I+QRL+ +
Sbjct: 1068 EKNEASKQGDAWRIAMDACIPVIDLIDTRRSIPYGIQQVRELLGISCSFDQIVQRLSTTM 1127
Query: 1303 ELLGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFER 1124
+ + KG K+HL+L+A+ MT TG + +N G++ + ++K VPFTE TL TP+K FE+
Sbjct: 1128 KTVAKGILKDHLILVANSMTCTGNLYGFNTGGYRATFRALKVQVPFTESTLFTPMKCFEK 1187
Query: 1123 AAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEV 944
AAE+ D L V+SC WGK A +GTGS+F+I W E K +E + L Y+ L +
Sbjct: 1188 AAEKCHSDALGCVVSSCSWGKHAALGTGSSFQILWN--ENQLKSNKEYGDGL--YDFLAM 1243
Query: 943 LGVDSEGEK---VKPSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNK 773
+ D E + + + ++ D+CL NG+ G D+F N G +
Sbjct: 1244 VRTDQEKARYTFLDDVDYLVEDNAMDDICLSPELNGT-HGVPTFEDNFEHQDTQN-GNSW 1301
Query: 772 PAMDQDTSCWNQQQATNGDGPDWN--LPSSAADDVGWNKPASNGDGAAWNQPTSVTEDV- 602
+ + W Q + D +W ++AA D G KPA G+ ++W+ P + D
Sbjct: 1302 ENGTKANASWEQNASAGNDSDNWGGWSNAAAAADTGAAKPADQGN-SSWDVPATAENDST 1360
Query: 601 ---AWSKPASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVG----- 446
W + + +P + D G K ++G G W +QT+ ED G
Sbjct: 1361 DWGGWGNEKAKDNRTVSTEPAE-LDTWSDRG-AKKGTDGGGGSWGKQTNTCEDSGTNLER 1418
Query: 445 --WSKPAGNGDDGGSWKKPTTNGDDIGWNQTAAAPE---DDAGWTQAKPNAANNSVPDSV 281
W+K + +W K ++G D W++ A + + + W + A N+
Sbjct: 1419 NSWAK-RPSSPSLSTWAKKNSDGGDGTWDKQANSCKKNVEQDSWKNMPVSPARNA----- 1472
Query: 280 DWKQTTVPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDDAGWKQT-------IAPEDD 122
W + + DA W E+ +E N S + W T +A +D+
Sbjct: 1473 -WNKKESSRGDATWEMRASTLEEKKTSESNEGSWEKSNAQKDSWGNTQHGSSDKMAVKDN 1531
Query: 121 ----GSW----KQTTAAEDDAGWSQPETNAAKSSASEWNAQ 23
W Q A+DD W A S+A +AQ
Sbjct: 1532 DMQQDPWGHIATQNINAQDDL-WGSVAAKAQTSTAENTDAQ 1571
>ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [Amborella trichopoda]
gi|548839106|gb|ERM99420.1| hypothetical protein
AMTR_s00131p00068700 [Amborella trichopoda]
Length = 1916
Score = 229 bits (584), Expect = 3e-57
Identities = 196/669 (29%), Positives = 282/669 (42%), Gaps = 66/669 (9%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSD- 1658
KK+ P LR + + C + Q S + + PCL F K H D
Sbjct: 980 KKNSPFRGHSKKLRFSSSEECRVGQASDGNWSSVPCLQF----------KYHDRVLCGDD 1029
Query: 1657 ----LYLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXX 1490
L+L V+ +YPRL E V+GD R+ V I W + ++ +WV +K + +
Sbjct: 1030 TGKVLHLFVNTIYPRLLEMIVQGDSRVNMVNIIWIDPDAPSWV--RKPCKKERGEIALEV 1087
Query: 1489 XXXXXXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTL 1310
V QRGDAW L S LP M L+D R IPY + ++ + LG+++A+ L QRL+
Sbjct: 1088 VIDKNVVKQRGDAWRTFLDSCLPVMNLIDIKRSIPYGIKQIEEYLGISSAFDLTFQRLSK 1147
Query: 1309 ALELLGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSF 1130
+L + KG + HLLL+A M LTGK++ +N +G+K L+ S+K P+PFTE TL TP+K F
Sbjct: 1148 SLSKVAKGILREHLLLVADNMALTGKLVGFNTSGYKALFRSLKVPLPFTEATLYTPMKCF 1207
Query: 1129 ERAAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETL 950
E+AAE D LSG VASC WGK VGTG+ FE+ W + + + P E D Y+ L
Sbjct: 1208 EKAAEGRNKDSLSGIVASCSWGKLVAVGTGTRFEVTWNNKQ-VEVPHE---YSTDVYDFL 1263
Query: 949 EVLGVDSEGEKVKPSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKP 770
++ E + C+G D+D N F + + + F +
Sbjct: 1264 HLVSTPGANE---IDNSCLGMDVDN-------MNEDKF-HAMSPEPLSAMDKPTFDGSPE 1312
Query: 769 AMDQDTSCWNQQQATNGDGPDWNLPSSAADDV----GWNKPASNGDGAA----------W 632
+D D W G W++ S A GW + D A W
Sbjct: 1313 VIDLDDD-WPHGNGKFGKS-SWDVAKSPARPSGGWGGWGVEEKSEDHQAATDNPNGWGGW 1370
Query: 631 NQPTSVTEDVAWSKPASNG--DGAD------WNQPNQPTSATEDVGWGKPVSNGDGAD-- 482
+ S E V +S SNG DG D W ++ WG N DG D
Sbjct: 1371 GKGKSDKEKVEFSTVKSNGWEDGGDTSTKCGWEGAANSPPKSDGRLWGSEKEN-DGKDLL 1429
Query: 481 -------WSQ---------QTSAAEDVGWSKPAGNGDDGGSWKK-------PTTNGDDIG 371
WS TS E S P G + GS K+ PT N + G
Sbjct: 1430 PTNNSNGWSVAKTPRNESFSTSGWEGAPKSPPKSEGWNWGSEKQNDDHEALPTDNSN--G 1487
Query: 370 WNQTAAAPEDDAGWTQAK-PNAANNSVPDSVDW-------KQTTVPKDDAGWSQ---PEP 224
W +A + G++++ A + D + W K+ + GW EP
Sbjct: 1488 WGTSATKKPAEEGFSKSGWEGVAKSPKSDGLSWGEKQNDDKEGLPSNNSRGWESSFAKEP 1547
Query: 223 NTEKTSATEWNNQSVSHRSEDDAGWKQTIAPEDDGSWKQTTAAEDDAGWSQPETN--AAK 50
E S + ++S + D GW+ E K+ + + GW N A K
Sbjct: 1548 AKESFSKSGGEGATISTPNSD--GWRWD--SEKQNHDKEALPSNNSHGWGSSFDNKSAEK 1603
Query: 49 S-SASEWNA 26
S S S W A
Sbjct: 1604 SFSKSGWEA 1612
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
italica]
Length = 2038
Score = 228 bits (581), Expect = 7e-57
Identities = 184/681 (27%), Positives = 286/681 (41%), Gaps = 89/681 (13%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGF--AKPCLHFALTKESYLASKGHSHSFYS 1661
KK H + F + CD C AQ + DG+ PC+ F+ + ++ + S+ +
Sbjct: 978 KKGHLCHLF-KKITFSTCD-CSFAQNT-IDGYLHVAPCVQFSFSDDNTILSESVERA--- 1031
Query: 1660 DLYLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXX 1481
+ ++ D + L +T +KGD RI++ +I W E+ +WV K T+N
Sbjct: 1032 -VNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWV---KNTQNTLKGEPTLEIIV 1087
Query: 1480 XXXVTQR-GDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLAL 1304
R G AW + + +P + L+D R IPY + +V +LLG++ A+ ++QRL+ +
Sbjct: 1088 EKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLSTTV 1147
Query: 1303 ELLGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFER 1124
+++ KG K+HL+L+A+ MT TG +I +N +G+K + S+K VPFTE TL TP+K FE+
Sbjct: 1148 KMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKCFEK 1207
Query: 1123 AAEEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEV 944
AAE+ D L V+SC WGK A +GTGS+F+I W E K +E + L Y+ L +
Sbjct: 1208 AAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWN--ENQLKSNKEYGDGL--YDFLAL 1263
Query: 943 LGVDSEGEK---VKPSSLCIGEDMDMDVCL-------------------QSLTNGSIFGN 830
+ D E + + E+ DVCL Q + NGS + N
Sbjct: 1264 VRTDQEKAGYAFLDDVDYLVEENAVDDVCLSPEPDGTHGKPTFEDNVEEQGIQNGSSWEN 1323
Query: 829 ------------KAGTDSFPRNKQSN--FGRNKPAMDQDTSCWNQQQATNGDGPDW---- 704
AG DS SN KP +DQD SCW+ + DW
Sbjct: 1324 DTTMNSSWEQNASAGNDSGDWGGWSNGAAAATKP-LDQDNSCWDAHATVENNSTDWGGWG 1382
Query: 703 --------NLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADW-NQP 551
+ D G +S GD W +S E K N D W N P
Sbjct: 1383 TEKQTNGEQAEINTWADKGAGMESSAGDD-NWEMKSSAPE-----KSKKNLDHDTWGNMP 1436
Query: 550 NQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVG-------------------WSKPAG 428
+++ + WG+ +G W +QT + ++ G W K
Sbjct: 1437 APASASASENTWGEQKGDGGDGAWEKQTGSCKEQGMDVDQDSWGKKTMPPSSNMWDKKKS 1496
Query: 427 NGDDG------GSWKKPTTNGDDIGWNQTAAAPEDDAG---W-TQAKPNAANNSVPDSVD 278
+G G SW + N D W AG W QA + D+
Sbjct: 1497 DGVHGNWEEQPSSWNEQMLNVDQDSWGDAREKNNSHAGDSRWPEQASTYKRKRTNADAGS 1556
Query: 277 WKQTTVPKDDAGWSQPE----PNTEKTSATEWNNQSVSHRSEDDAGWKQ----TIAPEDD 122
W + + W E T+ + + W N+ E K+ ++
Sbjct: 1557 WDNMAMAPSNNAWDAGEGFGRSITKSDAGSSWGNKDKMETDEHSKIPKEFDPWNTGKSNE 1616
Query: 121 GSWKQTTAAEDDAGWSQPETN 59
SW++T A +D G S + N
Sbjct: 1617 SSWEKTDALQDSWGNSAADNN 1637
Score = 62.8 bits (151), Expect = 5e-07
Identities = 95/480 (19%), Positives = 160/480 (33%), Gaps = 97/480 (20%)
Frame = -1
Query: 1171 PFTEGTLKTPIKSFERAAEEGVVDRLSG----SVASCCWGKRAPVGTGSNFEIFWKD-LE 1007
P +GT P +FE EE + S + + W + A G S W +
Sbjct: 1295 PEPDGTHGKP--TFEDNVEEQGIQNGSSWENDTTMNSSWEQNASAGNDSGDWGGWSNGAA 1352
Query: 1006 GISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIGEDMDMDVCLQSLTNGSIFGNK 827
+KPL++ + DA+ T+E D G + + GE +++ G+ +
Sbjct: 1353 AATKPLDQDNSCWDAHATVENNSTDWGGWGTEKQTN--GEQAEINTWADK---GAGMESS 1407
Query: 826 AGTDSFPRNKQSNFGRNKPAMDQDT--------------SCWNQQQATNGDGPDWNLPSS 689
AG D++ K S ++K +D DT + W +Q+ GDG W +
Sbjct: 1408 AGDDNWEM-KSSAPEKSKKNLDHDTWGNMPAPASASASENTWGEQKGDGGDGA-WEKQTG 1465
Query: 688 AADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQPTSATEDV---- 521
+ + G + D +W + T W K S+G +W + QP+S E +
Sbjct: 1466 SCKEQGMDV-----DQDSWGKKTMPPSSNMWDKKKSDGVHGNWEE--QPSSWNEQMLNVD 1518
Query: 520 --GWG-----------------------KPVSNGDGADWSQQTSAAEDVGWSKPAGNG-- 422
WG + +N D W A + W G G
Sbjct: 1519 QDSWGDAREKNNSHAGDSRWPEQASTYKRKRTNADAGSWDNMAMAPSNNAWDAGEGFGRS 1578
Query: 421 ----DDGGSWKKPTTNGDDIGWNQTAAAPEDDAGWTQAKPN-----------------AA 305
D G SW N D + ++ + P++ W K N AA
Sbjct: 1579 ITKSDAGSSWG----NKDKMETDEHSKIPKEFDPWNTGKSNESSWEKTDALQDSWGNSAA 1634
Query: 304 NNSVPDSVDWKQTTVPKDDA---GWSQPEPNTEKTSATEWNN------------------ 188
+N+ W + V ++ W + T W+N
Sbjct: 1635 DNNNTQEGSWDKIAVKDTNSQQDSWGNVAVQNKNTQNGSWDNGAEKVPTSDAQDSWGNLA 1694
Query: 187 -----QSVSHRSEDDAGWKQTIAPEDDGSWKQTTAAEDDAGWSQPETNAAKSSASEWNAQ 23
S + +S+ GW A G +TT + D+ GW ++ + W+ Q
Sbjct: 1695 ATPAGNSDAKQSDSWDGWNAAPAENSQGKCNETTDSGDNKGW---KSEGWGGKSGNWSGQ 1751
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 226 bits (576), Expect = 3e-56
Identities = 176/647 (27%), Positives = 298/647 (46%), Gaps = 43/647 (6%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDL 1655
KK + F N L + C Q + PCL F L +G S S+ L
Sbjct: 970 KKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFVL--------RGASDSYLDKL 1021
Query: 1654 Y-LMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXX 1478
++ +++YP L ET +KGD RI + I W + ++ W+ + ++N+
Sbjct: 1022 SGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWI--RNPSKNRKGELALDVVLEK 1079
Query: 1477 XXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALEL 1298
V Q GDAW L S LP L+D R +PY++ +V +LLGV+ A++ +QRL+ ++ +
Sbjct: 1080 SVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTM 1139
Query: 1297 LGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAA 1118
+ KG K HL+L+A+ MT G ++ +N+ G+K L S+ VPFTE TL TP K FE+AA
Sbjct: 1140 VAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFTPRKCFEKAA 1199
Query: 1117 EEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLG 938
E+ D LS VA+C WGK VGTGS F++ W + E+ N+ D + + L
Sbjct: 1200 EKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLW-------QTENEEFNQDDGVDVYDFLH 1252
Query: 937 VDSEGEKVKPSSL-CIGEDMD-----MDVCLQS----LTNGSIFGNKAGTDSFPRNKQSN 788
+ ++ S C+GE++D D L ++ +F + S+ NKQ N
Sbjct: 1253 MVRSSTGIEESDTGCLGEEVDGLEDEFDWSLSPEHNLCSDKPVFEDLVEDQSWLENKQEN 1312
Query: 787 FGRNKPAMDQDTSC-WNQQQATNGDGPDWNLPSSAADDVG-WNKPASN---GDGAAWNQP 623
D + C + + G PSS G W K + + G+ +P
Sbjct: 1313 AN-----WDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKP 1367
Query: 622 TSVTEDVAWSKPASNGDGADWNQPNQPTSAT-----EDVGWGKPVSN-GDGADWSQQTSA 461
+ + +W + + + W P + + + WGK + + + +TS+
Sbjct: 1368 SGWGTEASWGESSCD----KWENVGSPAAKSFSEWGTEASWGKSFGDKPENVSPAAKTSS 1423
Query: 460 --AEDVGWSKPAGNGDD--GGSWKKPTTN-GDDIGWNQTAAAPEDDAGWTQAKPNA---- 308
+ W K +G+ + GGS KP + G W +++ ++ T AKP++
Sbjct: 1424 GWGSEASWGKSSGDRQENVGGSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGT 1483
Query: 307 -ANNSVPDSVDWKQTTVPKDD--AGWSQPEPNTEKTSA-TEWNNQSVS------HRSEDD 158
A+ V ++ P ++ +GW ++ K+S +EW + + + + SE++
Sbjct: 1484 EASWDKSSEVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWKDHANATASWGRNGSEEN 1543
Query: 157 AGWKQTIAPEDDGSWKQTTAAE--DDAGWSQPETNAAKSSASEWNAQ 23
+GW + SWK T A + DD G +A ++S+S W A+
Sbjct: 1544 SGW------DTKASWK-TKALDKLDDVG------SAVENSSSVWGAR 1577
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 224 bits (572), Expect = 7e-56
Identities = 167/579 (28%), Positives = 268/579 (46%), Gaps = 40/579 (6%)
Frame = -1
Query: 1651 LMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXX 1472
++ D++ P L ET +KGD RI I W E+ TW+ + +R +
Sbjct: 1027 ILADMICPVLLETIIKGDHRISCANIIWATPETNTWI--RNPSRTQKGELALDIVLEKSV 1084
Query: 1471 VTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLG 1292
V + GDAW L S LP + L++ +R IPY++ +V +LLGV+ A+ +QRL+ ++ ++
Sbjct: 1085 VKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVSCAFDTAVQRLSKSVTMVA 1144
Query: 1291 KGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEE 1112
KG K HL+L+ + MT G +I + G+K L S+ VPFTE TL TP K FE+AAE+
Sbjct: 1145 KGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEK 1204
Query: 1111 GVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVD 932
D LS VASC WGK VGTGS+F++ W E P +D Y L ++
Sbjct: 1205 CHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPE----GSMDVYSFLNMVRST 1260
Query: 931 SEGEKVKPSSLCIGEDMDMDVCLQ-----------SLTNGSIFGNKAGTDSFPRNK--QS 791
+ GE + + C+G ++D D+ L+ S ++ F + A F N+ +S
Sbjct: 1261 AGGE--ESVTACLGAEVD-DLMLEDEDWNLSPEHNSSSDKPTFEDSAEFQDFLGNQPAES 1317
Query: 790 NFGRNKPAMDQDTSCWNQQQATNGDG----PDWNL--PSSAADDV---GWNKPASNGDGA 638
N+ + D+ S N N DG W+L ++ A+DV GW+ A+
Sbjct: 1318 NWEKISSLKDRSRSSGNWDVDKN-DGAVKEKPWSLGMNTAEANDVASSGWDTAAARTTNN 1376
Query: 637 AWNQPTSVTEDVAWS-----KPASNGDGADWNQPNQPTSATEDVG--WGKPVSNGDGADW 479
+WN +V + ++S KP + A Q TS D G WG+ D +
Sbjct: 1377 SWNSENNVAQSNSFSGWATKKPEPHNGFATKVQEEPTTSNDWDAGAAWGRK----DRDNK 1432
Query: 478 SQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDD-----IGWNQTAAAPEDDAGWTQAKP 314
+T+A++ W +GD+ G K +D GW+ + + +GW
Sbjct: 1433 FAETNASK--SWWGKVTDGDESGQNKSKNKRPEDQDVGTHGWDDKMSQDQSISGWAS--- 1487
Query: 313 NAANNSVPDSVDW--KQTTVPKDDA-GWSQPEP-NTEKTSATE-WNNQSVSHRSEDDAGW 149
+ +S+ W K + P D A GW E T + W + S++++ +GW
Sbjct: 1488 KTTQEATTESLGWDSKGNSNPGDAACGWKAASTWGAENTDGDKLWGKEVSSNQADTASGW 1547
Query: 148 KQTIAPEDDGSWKQT-TAAEDDAGWSQPETNAAKSSASE 35
+ +PE W T + + D GW + + +E
Sbjct: 1548 GKPKSPEISLGWGSTKESVKSDRGWGVSSSGGGRDKKTE 1586
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 221 bits (564), Expect = 6e-55
Identities = 170/635 (26%), Positives = 277/635 (43%), Gaps = 50/635 (7%)
Frame = -1
Query: 1798 LRLQACDACDIAQRSGNDGFAKPCLHF-ALTKESYLASKGHSHSFYSDLYLMVDVLYPRL 1622
LR + C Q +G + PCL F T++ +L H ++ D+++P L
Sbjct: 980 LRFSISEHCAFHQWNGEESIDMPCLIFWHQTRDVHLERTAH---------ILADIVFPLL 1030
Query: 1621 AETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEK 1442
+ET +KGD RI++ + W + +S +W K +R + V Q GDAW
Sbjct: 1031 SETIIKGDPRIKSASVIWISPDSTSW--QKNPSRWQDGELALDVCLEKSAVKQNGDAWRN 1088
Query: 1441 ALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLL 1262
L LP + L+D R +PY++ +V +LLG++ A+ +IQRL+ ++ ++ KG +HL+L
Sbjct: 1089 VLDCCLPVLHLIDTRRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLIL 1148
Query: 1261 IASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSV 1082
+A+ MT TG +I +N+ G+K L ++ VPFTE TL TP K FE+AAE+ D LS V
Sbjct: 1149 LANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIV 1208
Query: 1081 ASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSS 902
ASC WGK VGTGS F+I W E C + D + L + G+ +P+S
Sbjct: 1209 ASCSWGKHVAVGTGSRFDILWDQ-------KELGCKQDDVVDVYNFLHMVRSGKSEEPTS 1261
Query: 901 LCIGEDMDMDVCLQ-------------SLTNGSIFGNKAG----TDSFPRNKQSNFGRNK 773
C+GE+++ D+ ++ S + +F + A D++P + +
Sbjct: 1262 ACLGEEIE-DIMVEDEYGELTLSPEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSL 1320
Query: 772 PAMDQDTSCWNQQQ---ATN-GDGPDWN-LPSSAADDVGWNKPASNGDGAAW-------N 629
A+ W + ATN DG DW+ A DV N +AW N
Sbjct: 1321 GAVSTGGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGN 1380
Query: 628 QPTSVTEDVAWSK-----------------PASNGDGADWNQPNQPTSATEDVGWGKPVS 500
+ T+ + D WS P S G W+ + + T+D + + +
Sbjct: 1381 KATNSSNDNDWSNCSTKEVERDSFTSMEKTPKSGG----WDSASTWGTKTKDDSFKRETA 1436
Query: 499 NGDGADWS--QQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIGWNQTAAAPEDDAGW- 329
+ WS Q+ A + K A G W +D W++ + ED+ W
Sbjct: 1437 PKKSSQWSGLQKDKAETQDAFHKKAEMASKSGGW-------EDKAWSRGTSKTEDN--WS 1487
Query: 328 TQAKPNAANNSVPDSVDWKQTTVPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDDAGW 149
+Q K A + V +T GW++ ++ A WN+ S
Sbjct: 1488 SQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSGGDHQSEA-GWNDGQASMD------- 1539
Query: 148 KQTIAPEDDGSWKQTTAAEDDAGWSQPETNAAKSS 44
++ ++ D Q + + W P +K S
Sbjct: 1540 REKVSDRWDRKATQKLESHQTSSWGSPTVGDSKDS 1574
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 220 bits (561), Expect = 1e-54
Identities = 175/631 (27%), Positives = 288/631 (45%), Gaps = 25/631 (3%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDL 1655
KK + F N L + C Q + PCL F L +G S S+ L
Sbjct: 971 KKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVL--------RGASDSYLDKL 1022
Query: 1654 Y-LMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXX 1478
++ +++YP L ET +KGD RI + I W + ++ W+ + ++N+
Sbjct: 1023 SGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWI--RNPSKNRKGELALDVVLEK 1080
Query: 1477 XXVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALEL 1298
V Q GDAW L S LP L+D R +PY++ +V +LLGV+ A++ +QRL+ ++ +
Sbjct: 1081 SVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASVTM 1140
Query: 1297 LGKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAA 1118
+ KG K HL+L+A+ MT G ++ +N+ G+K L S+ VPFTE TL P K FE+AA
Sbjct: 1141 VAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFEKAA 1200
Query: 1117 EEGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLG 938
E+ D LS VA+C WGK VGTGS F++ W+ Q + +D Y+ L ++
Sbjct: 1201 EKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQ----TENEEFNQDDGVDVYDFLHMVR 1256
Query: 937 VDSEGEKVKPSSLCIGEDMD-----MDVCLQS----LTNGSIFGNKAGTDSFPRNKQSNF 785
+ E++ C+GE++D D L ++ IF + S+ NKQ N
Sbjct: 1257 SSTGIEELDTG--CLGEEVDGLEDEFDWSLSPEHNLCSDKPIFEDLVEDQSWLENKQEN- 1313
Query: 784 GRNKPAMDQDTSC-WNQQQATNGDGPDWNLPSSAADDVG-WNKPASN---GDGAAWNQPT 620
D + C + + G PSS G W K + + G+ +P+
Sbjct: 1314 ----ENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPS 1369
Query: 619 SVTEDVAWSKPASNGDGADWNQPNQPTSAT-----EDVGWGKPVSNGDGADWSQQTSAAE 455
+ +W + +S+ W P + + + WGK S GD + + +A
Sbjct: 1370 GWGTEASWGESSSD----KWENVGSPAAKSFSEWGTEASWGK--SFGDKPENVRSPAAKT 1423
Query: 454 DVGWSKPAGNGDDGGSWKKPTTNGDDIGWNQTAAAPEDDAGWTQAKPNAANNSVPDSVDW 275
GW A G K P +++G +A + +GW AK + +S D ++
Sbjct: 1424 SSGWGSEASWG------KSPGDRQENVG----RSASKPLSGW-GAKASWGKSS-EDKLEE 1471
Query: 274 KQTTVPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDD-AGW----KQTIAPEDDGSWK 110
+TTV K + W E + +K+S E + V+ +E+ +GW + + D WK
Sbjct: 1472 VETTVAKPSSAWG-TEASWDKSS--EVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWK 1528
Query: 109 QTTAAEDDAGWSQPETNAAKSSASEWNAQSV 17
A G + E N+ + + WN +++
Sbjct: 1529 DHANATASWGRNGSEENSGWDTKASWNTKAL 1559
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 216 bits (550), Expect = 3e-53
Identities = 170/629 (27%), Positives = 264/629 (41%), Gaps = 45/629 (7%)
Frame = -1
Query: 1780 DACDIAQRSGNDGFAKPCLHFAL--TKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTV 1607
+ C I Q G CL F TK+ +L L +VD++YP L ET +
Sbjct: 986 ECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLDCT---------LQDLVDIIYPVLLETVI 1036
Query: 1606 KGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALHSL 1427
KGD RI + I W + ++ TW+ S T+ V Q GDAW +
Sbjct: 1037 KGDPRICSANIIWVSPDTTTWIRSPSKTQK--GELALDVVLEKSAVKQNGDAWRTVIDCC 1094
Query: 1426 LPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCM 1247
LP + L+D R IPY++ +V +LLG++ A++ +QRL+ ++ ++ +G K HL+L+A+ M
Sbjct: 1095 LPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSM 1154
Query: 1246 TLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCW 1067
T G +I +N+ G+K L S+ VPF+E TL TP K FERAAE+ VD LS VASC W
Sbjct: 1155 TCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSW 1214
Query: 1066 GKRAPVGTGSNFEIFWKDLE-GISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIG 890
GK VGTGS F++ W E G +Q + +D Y L +L S ++ C+G
Sbjct: 1215 GKHVAVGTGSRFDVLWDRKEVGF-----DQKSGIDVYNFLHML---SSASGPSSTTTCLG 1266
Query: 889 EDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNGDGP 710
E++D + + ++ S+ + P + + N S W ++ +
Sbjct: 1267 EEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSW-EKGVSLDKVS 1325
Query: 709 DWNLPSSAADDVGWNKPASNGDGAA--------------WNQPTSVTEDVAWSKPAS--N 578
WN+ S+ WNK A +GD A W S T+D A + ++
Sbjct: 1326 SWNVSSA------WNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDAAAAATSTTKK 1379
Query: 577 GDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWS-KPAGNGDDGGSWK 401
+ DW T G N + DW S + V + + G W
Sbjct: 1380 TEWCDWGTSKSKTQEVAATVTGTAEQN-EWCDWRTSKSKIQVVAAAVTSTTKQSEWGDWG 1438
Query: 400 KPTTNGDDIGWNQTAAAPEDDAGWTQAK-------PNAANNSVPDSVDWKQTTVPKDDAG 242
+ D+ T + W + K P V + + K+D
Sbjct: 1439 TSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQ 1498
Query: 241 WSQPEPNTEKT----SATEWNNQSVSHRSEDD------AGW-KQTIAPE---DDGS---- 116
E T K+ + T W D +GW Q + P DD S
Sbjct: 1499 DVSMEEKTFKSNGADTGTSWGTMGKESEKPDANDALPWSGWGTQDVIPTKTLDDSSKSSG 1558
Query: 115 WKQTTAAEDDAGWSQPETNAAKSSASEWN 29
W+Q + E GW + + +S++ W+
Sbjct: 1559 WEQQKSPECSQGWGSLDESNQPASSNGWD 1587
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 216 bits (550), Expect = 3e-53
Identities = 170/629 (27%), Positives = 264/629 (41%), Gaps = 45/629 (7%)
Frame = -1
Query: 1780 DACDIAQRSGNDGFAKPCLHFAL--TKESYLASKGHSHSFYSDLYLMVDVLYPRLAETTV 1607
+ C I Q G CL F TK+ +L L +VD++YP L ET +
Sbjct: 986 ECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLDCT---------LQDLVDIIYPVLLETVI 1036
Query: 1606 KGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALHSL 1427
KGD RI + I W + ++ TW+ S T+ V Q GDAW +
Sbjct: 1037 KGDPRICSANIIWVSPDTTTWIRSPSKTQK--GELALDVVLEKSAVKQNGDAWRTVIDCC 1094
Query: 1426 LPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCM 1247
LP + L+D R IPY++ +V +LLG++ A++ +QRL+ ++ ++ +G K HL+L+A+ M
Sbjct: 1095 LPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSM 1154
Query: 1246 TLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCW 1067
T G +I +N+ G+K L S+ VPF+E TL TP K FERAAE+ VD LS VASC W
Sbjct: 1155 TCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSW 1214
Query: 1066 GKRAPVGTGSNFEIFWKDLE-GISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIG 890
GK VGTGS F++ W E G +Q + +D Y L +L S ++ C+G
Sbjct: 1215 GKHVAVGTGSRFDVLWDRKEVGF-----DQKSGIDVYNFLHML---SSASGPSSTTTCLG 1266
Query: 889 EDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNGDGP 710
E++D + + ++ S+ + P + + N S W ++ +
Sbjct: 1267 EEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAESSW-EKGVSLDKVS 1325
Query: 709 DWNLPSSAADDVGWNKPASNGDGAA--------------WNQPTSVTEDVAWSKPAS--N 578
WN+ S+ WNK A +GD A W S T+D A + ++
Sbjct: 1326 SWNVSSA------WNKKAEDGDKFAAALTSTTKQSDWCDWGTSKSKTQDAAAAATSTTKK 1379
Query: 577 GDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWS-KPAGNGDDGGSWK 401
+ DW T G N + DW S + V + + G W
Sbjct: 1380 TEWCDWGTSKSKTQEVAATVTGTAEQN-EWCDWRTSKSKIQVVAAAVTSTTKQSEWGDWG 1438
Query: 400 KPTTNGDDIGWNQTAAAPEDDAGWTQAK-------PNAANNSVPDSVDWKQTTVPKDDAG 242
+ D+ T + W + K P V + + K+D
Sbjct: 1439 TSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQ 1498
Query: 241 WSQPEPNTEKT----SATEWNNQSVSHRSEDD------AGW-KQTIAPE---DDGS---- 116
E T K+ + T W D +GW Q + P DD S
Sbjct: 1499 DVSMEEKTFKSNGADTGTSWGTMGKESEKPDANDALPWSGWGTQDVIPTKTLDDSSKSSG 1558
Query: 115 WKQTTAAEDDAGWSQPETNAAKSSASEWN 29
W+Q + E GW + + +S++ W+
Sbjct: 1559 WEQQKSPECSQGWGSLDESNQPASSNGWD 1587
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 215 bits (548), Expect = 5e-53
Identities = 166/604 (27%), Positives = 269/604 (44%), Gaps = 6/604 (0%)
Frame = -1
Query: 1819 LNSFVDNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVD 1640
+N ++ N+ L ++C + A PCL F L K H + + ++ +
Sbjct: 981 VNQYLKNIELSFSESCSSSHP------AAPCLTFWL--------KNHDSDLDNAVKVLSE 1026
Query: 1639 VLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQR 1460
+ P L ET +KGD RI + I W + ++ TWV + + N V Q
Sbjct: 1027 NICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNPYKSSN--GELALDIVLEEEAVKQS 1084
Query: 1459 GDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAY 1280
GDAW L S LP + L+D R IPY++ ++ +LLG++ + IQR+ +++++ KG
Sbjct: 1085 GDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVL 1144
Query: 1279 KNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVD 1100
+ HL+L+AS MT G ++ +N G+K L + VPFT+ TL TP K FERAAE+ D
Sbjct: 1145 REHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTD 1204
Query: 1099 RLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGE 920
LS VASC WGK VGTGS F+I W E S +E +D Y L ++ + GE
Sbjct: 1205 SLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIE----GMDVYSFLHMVKSVTNGE 1260
Query: 919 KVKPSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDS-FPRNKQSNFGRNKPAMDQDTSCW 743
+ + C+GED+D + + + G + +G ++ F N + G D +
Sbjct: 1261 --EETDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSNGWDVSS--- 1315
Query: 742 NQQQATNGDGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGAD 563
NQ Q+ + W +SN DG + ++ +W K + D +
Sbjct: 1316 NQTQSKTNEWSGW--------------ASSNKDGR-----SETAQENSWGKTVNQEDSSK 1356
Query: 562 WNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNG 383
N N T+A + K SN + +DW S G + +W TT+
Sbjct: 1357 SNAWNTSTTADQT----KTKSN-EWSDWGSNKSEIPAGGSKAVQEDSSKSNAWNTSTTS- 1410
Query: 382 DDIGWNQTAAAPEDDAGWTQAK---PNAANNSVPDSVDWKQTTVPKDDAGWSQPEPNTEK 212
NQT ++ + W K P + +V Q K + + + K
Sbjct: 1411 -----NQTKTKSKEWSAWGSNKSEIPACGSKAV-------QEDSSKSNTWNTSTTADQTK 1458
Query: 211 TSATEWNNQSVSHRSEDDAGWKQTIAPEDDGS--WKQTTAAEDDAGWSQPETNAAKSSAS 38
T + EW+ S++SE AG + + + S W ++T A+ K+ ++
Sbjct: 1459 TKSNEWSAWG-SNKSEIPAGGSKAVQEDSSKSNAWNRSTTADQ-----------TKTKSN 1506
Query: 37 EWNA 26
EW+A
Sbjct: 1507 EWSA 1510
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 215 bits (547), Expect = 6e-53
Identities = 168/577 (29%), Positives = 254/577 (44%), Gaps = 35/577 (6%)
Frame = -1
Query: 1654 YLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXX 1475
++M D++ P L +T +KGD RI V I W N + TWV S +
Sbjct: 823 HIMADMICPVLLDTIIKGDPRISTVNIIWINPGTTTWVQSPCSSTKGELAVEVALEKEAV 882
Query: 1474 XVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELL 1295
+T GDAW L LP L+D R IPY++ ++ L G++ A+ +QRL+ ++ ++
Sbjct: 883 RLT--GDAWRIVLDCCLPVFHLIDTRRSIPYAIKQIQDLFGISCAFDQAVQRLSTSVTMV 940
Query: 1294 GKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAE 1115
KG K HLLL+AS MT G ++ +N +G K L ++ VPFTE TL TP K FERA+E
Sbjct: 941 TKGVLKEHLLLLASSMTCAGNLVGFNTSGIKALCRALNVQVPFTEATLYTPRKCFERASE 1000
Query: 1114 EGVVDRLSGSVASCCWGKRAPVGTGSNFEIFW--KDLEGISKPLEEQCNELDAYETLEVL 941
+ VD L+ V SC WGKR +GTG+ F++ W K++E KP D Y L ++
Sbjct: 1001 KCHVDTLASIVGSCSWGKRVSIGTGAKFDLLWETKEIEMADKP-------TDVYNFLHLV 1053
Query: 940 GVDSEGEKVKPSSLCIGEDM---DMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKP 770
+E E+V L GED+ + DV ++ + NKA + + G +
Sbjct: 1054 SSANE-EEVDSGGL--GEDIESFEKDVYMEPALSPE-QENKAVFE-----ETLEIGVDSD 1104
Query: 769 AMDQDTSCWNQQQATNGDGPDWNL----PSSAADDVGWNKPASNGDGAAWNQPTSVTEDV 602
D S W+ A G WN S + + GW+ S D A P ++
Sbjct: 1105 ITGADESSWD---AFPSSGTGWNANKIDTGSGSAEGGWSSWGSKKDQA---NPEDSSKTG 1158
Query: 601 AWSKPASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGAD------WSQQTSAAEDVGWS 440
WS S Q QP +++ GW S G W Q A D+
Sbjct: 1159 GWSSGGS-------KQKPQPEDSSKSGGWDASKSWGGSNQGDPSPVWGQPVKATNDISIE 1211
Query: 439 KPAGNGD-DGGSW-----KKPTTNGDDIGWNQTAAAPEDDAGWTQAKPN------AANNS 296
G+G +GG W KK + ++ + TA + W+ +KP A
Sbjct: 1212 NDHGSGSAEGGGWANSGMKKDLSKQEN---SSTAGGWDASKSWSGSKPKDPSSAWGAGKK 1268
Query: 295 VPDSVDWKQTTVPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDDA---GW--KQTIAP 131
D+ WK++ KD A S E + W + + ED A GW ++ +
Sbjct: 1269 TDDNNGWKKSDSKKDLASGS-----VEDGGCSGWGPKKDLLQPEDSAGENGWGASKSKSK 1323
Query: 130 EDDGSWKQTTAAEDDAGW--SQPETNAAK-SSASEWN 29
E +W + D+ GW + P+ ++ S WN
Sbjct: 1324 EPSSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWN 1360
>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
Length = 1976
Score = 214 bits (544), Expect = 1e-52
Identities = 181/660 (27%), Positives = 276/660 (41%), Gaps = 72/660 (10%)
Frame = -1
Query: 1792 LQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVL----YPR 1625
L + C G+ G PCL F SY A+ DL +DVL YP
Sbjct: 984 LSVSECCSFRDPCGSKGSDMPCLTF-----SYNATD-------PDLERTLDVLCNTVYPV 1031
Query: 1624 LAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWE 1445
L E +KGD RI + I WN+ + TW+ ++ +R V Q GDAW
Sbjct: 1032 LLEIVIKGDSRICSANIIWNSSDMTTWIRNRHASRR--GEWVLDVTVEKSAVKQSGDAWR 1089
Query: 1444 KALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLL 1265
+ S L + L+D R IPYSV +V +LLG++ A++ +QRL+ ++ ++ KG K H++
Sbjct: 1090 VVIDSCLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHII 1149
Query: 1264 LIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGS 1085
L+A+ MT +G ++ +N+ G+K L S+ PFTE TL P K FE+AAE+ D LS
Sbjct: 1150 LLANNMTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLSTV 1209
Query: 1084 VASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPS 905
V SC WGKR VGTGS FE+ W E L+++ E D Y L+++ + + S
Sbjct: 1210 VGSCSWGKRVDVGTGSQFELLWNQKE---TGLDDK-EETDVYSFLQMVISTTNADAFVSS 1265
Query: 904 SLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQAT 725
+ +M +S S G DS + G+ A + +S W+
Sbjct: 1266 PGFDVTEEEMAEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWD----- 1320
Query: 724 NG--DGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWS---------KPASN 578
NG G +W + S G P SN W + T+V ++ AWS + + +
Sbjct: 1321 NGCSGGSEWGVSKSTG---GEANPESN-----WEKTTNVEKEDAWSSWNTRKDAQESSKS 1372
Query: 577 GDGADWN--------------------------QPNQPTS------ATEDVGWGKPVSNG 494
G W + N+PTS + D W K
Sbjct: 1373 DSGGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSDKSWDKKNWGT 1432
Query: 493 DGAD--WSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIG--------WNQTAAAPE 344
+ A W +A K + D +W N D+G WN+ ++ E
Sbjct: 1433 ESAPAAWGSTDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETE 1492
Query: 343 DD-AGWTQAKPNAANNSVPDSVDWKQTTVPKDDAGW-SQPEPNTEKTSA-TEWN--NQSV 179
+ A W + + + +S D K + A W SQ + N+E S W ++
Sbjct: 1493 SNGATWGSSDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKK 1552
Query: 178 SHRSEDDAGW--------KQTIAPEDDGSW--KQTTAAEDDAGWSQPETNAAKSSASEWN 29
S AGW + + P G+W K++ A W T+AA +S+ N
Sbjct: 1553 SETEPGPAGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWG--STDAAAWGSSDKN 1610
>ref|NP_181532.2| nuclear RNA polymerase D1B [Arabidopsis thaliana]
gi|75320513|sp|Q5D869.1|NRPE1_ARATH RecName:
Full=DNA-directed RNA polymerase V subunit 1; AltName:
Full=DNA-directed RNA polymerase D subunit 1b;
Short=AtNRPD1b; Short=Nuclear RNA polymerase D 1b;
AltName: Full=DNA-directed RNA polymerase E subunit 1;
Short=Nuclear RNA polymerase E 1; AltName: Full=Protein
DEFECTIVE IN MERISTEM SILENCING 5; AltName: Full=Protein
DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; AltName:
Full=Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1;
AltName: Full=RNA polymerase IV subunit 1; Short=POL IV 1
gi|59939210|gb|AAX12373.1| DNA-directed RNA polymerase
alpha subunit [Arabidopsis thaliana]
gi|62822917|gb|AAY15198.1| DNA-dependent RNA polymerase
large subunit [Arabidopsis thaliana]
gi|330254673|gb|AEC09767.1| nuclear RNA polymerase D1B
[Arabidopsis thaliana]
Length = 1976
Score = 214 bits (544), Expect = 1e-52
Identities = 181/660 (27%), Positives = 276/660 (41%), Gaps = 72/660 (10%)
Frame = -1
Query: 1792 LQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVL----YPR 1625
L + C G+ G PCL F SY A+ DL +DVL YP
Sbjct: 984 LSVSECCSFRDPCGSKGSDMPCLTF-----SYNATD-------PDLERTLDVLCNTVYPV 1031
Query: 1624 LAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWE 1445
L E +KGD RI + I WN+ + TW+ ++ +R V Q GDAW
Sbjct: 1032 LLEIVIKGDSRICSANIIWNSSDMTTWIRNRHASRR--GEWVLDVTVEKSAVKQSGDAWR 1089
Query: 1444 KALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLL 1265
+ S L + L+D R IPYSV +V +LLG++ A++ +QRL+ ++ ++ KG K H++
Sbjct: 1090 VVIDSCLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHII 1149
Query: 1264 LIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGS 1085
L+A+ MT +G ++ +N+ G+K L S+ PFTE TL P K FE+AAE+ D LS
Sbjct: 1150 LLANNMTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLSTV 1209
Query: 1084 VASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPS 905
V SC WGKR VGTGS FE+ W E L+++ E D Y L+++ + + S
Sbjct: 1210 VGSCSWGKRVDVGTGSQFELLWNQKE---TGLDDK-EETDVYSFLQMVISTTNADAFVSS 1265
Query: 904 SLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQAT 725
+ +M +S S G DS + G+ A + +S W+
Sbjct: 1266 PGFDVTEEEMAEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWD----- 1320
Query: 724 NG--DGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWS---------KPASN 578
NG G +W + S G P SN W + T+V ++ AWS + + +
Sbjct: 1321 NGCSGGSEWGVSKSTG---GEANPESN-----WEKTTNVEKEDAWSSWNTRKDAQESSKS 1372
Query: 577 GDGADWN--------------------------QPNQPTS------ATEDVGWGKPVSNG 494
G W + N+PTS + D W K
Sbjct: 1373 DSGGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSDKSWDKKNWGT 1432
Query: 493 DGAD--WSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDDIG--------WNQTAAAPE 344
+ A W +A K + D +W N D+G WN+ ++ E
Sbjct: 1433 ESAPAAWGSTDAAVWGSSDKKNSETESDAAAWGSRDKNNSDVGSGAGVLGPWNKKSSETE 1492
Query: 343 DD-AGWTQAKPNAANNSVPDSVDWKQTTVPKDDAGW-SQPEPNTEKTSA-TEWN--NQSV 179
+ A W + + + +S D K + A W SQ + N+E S W ++
Sbjct: 1493 SNGATWGSSDKTKSGAAAWNSWDKKNIETDSEPAAWGSQGKKNSETESGPAAWGAWDKKK 1552
Query: 178 SHRSEDDAGW--------KQTIAPEDDGSW--KQTTAAEDDAGWSQPETNAAKSSASEWN 29
S AGW + + P G+W K++ A W T+AA +S+ N
Sbjct: 1553 SETEPGPAGWGMGDKKNSETELGPAAMGNWDKKKSDTKSGPAAWG--STDAAAWGSSDKN 1610
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 213 bits (542), Expect = 2e-52
Identities = 168/615 (27%), Positives = 266/615 (43%), Gaps = 25/615 (4%)
Frame = -1
Query: 1792 LQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAET 1613
L + C G PCL F SY A+ L ++ + +YP L ET
Sbjct: 984 LSVSECCSFQDPCGRKDSDMPCLMF-----SYSAT---DPDLERTLDVLCNTIYPVLLET 1035
Query: 1612 TVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALH 1433
+KGD RI + I WN+ + TW+ + +R V Q GDAW +
Sbjct: 1036 VIKGDPRICSANIIWNSSDMTTWIRNCHASRR--GEWVLDVTVEKSAVKQSGDAWRVVID 1093
Query: 1432 SLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIAS 1253
+ L + L+D R IPYS+ +V +LLG++ A++ +QRL+ ++ ++ KG K H++L+A+
Sbjct: 1094 ACLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHIILLAN 1153
Query: 1252 CMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASC 1073
MT +G ++ +N+ G+K L S+ PFTE TL TP + FE+AAE+ D LS V SC
Sbjct: 1154 NMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITPRRCFEKAAEKCHTDSLSTVVGSC 1213
Query: 1072 CWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCI 893
WGKR VGTGS FE+ W E L+++ E D Y L+++ + + S
Sbjct: 1214 SWGKRVDVGTGSQFELLWNQKE---TGLDDK-EETDVYSFLQMVRSTTNADAYVSSPGFD 1269
Query: 892 GEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNG-- 719
+ +M +S S G DS + G+ + + +S W+ NG
Sbjct: 1270 VTEEEMAEWAESPERDSALGEPKFEDSAEFQNLHDEGKPSESNWEKSSSWD-----NGCS 1324
Query: 718 DGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWN---QPN 548
G +W + + G P SN W + T+V ++ AWS WN
Sbjct: 1325 GGSEWGVSKNTG---GEANPESN-----WEKTTNVEKEDAWS---------SWNTKKDAQ 1367
Query: 547 QPTSATEDVGWGKPVSNGDG---ADWSQQTSAAEDVGWSKPAGNGDDGGSWKKPTTNGDD 377
+ + + V WG + D +W + + + + P N W +G D
Sbjct: 1368 ESSKSDSGVAWGLKTKDDDADTTPNWETRPAQTDSI---VPENNEPTSDVWGH--KSGSD 1422
Query: 376 IGWNQTAAAPED-DAGWTQAKPNAANNSVPDSVDWKQTTVPKDDAGW-SQPEPNTEKTSA 203
W++ E A W + + +V S D K + D A W S+ + N+E S
Sbjct: 1423 KSWDKKNGGTESAPAAW-----GSTDAAVWGSSDKKNSETESDAAAWGSRDKKNSEVGSG 1477
Query: 202 T----EWNNQSVSHRSEDDAGWKQTIAPEDD----GSW--KQTTAAEDDAGW-----SQP 68
WN +S S D A W + + SW K + A W ++P
Sbjct: 1478 AGVLGPWNKKS-SKTESDGATWGSSDKTKSGAAAWSSWDKKNMETDSEPAAWGSQSKNKP 1536
Query: 67 ETNAAKSSASEWNAQ 23
ET + S+ W+ +
Sbjct: 1537 ETESGPSTWGAWDTK 1551
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 211 bits (538), Expect = 7e-52
Identities = 173/616 (28%), Positives = 274/616 (44%), Gaps = 23/616 (3%)
Frame = -1
Query: 1792 LQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDLYLMVDVLYPRLAET 1613
L D C G+ PCL F SY A+ + L ++ + +YP L ET
Sbjct: 984 LSVSDCCSFRDPCGSKDSDMPCLMF-----SYNAT---NPDLERTLDVLCNTIYPVLLET 1035
Query: 1612 TVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALH 1433
+KGD RI + I WN+ + TW+ ++ +R V Q GDAW +
Sbjct: 1036 VIKGDPRICSANIIWNSSDMTTWIRNRHASRR--GEWVLDVTVEKSAVKQSGDAWRVVID 1093
Query: 1432 SLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIAS 1253
S L + L+D R IPYS+ +V +LLG++ A++ +QRL+ +++++ KG K H++L+A+
Sbjct: 1094 SCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVKMVSKGVLKEHIILLAN 1153
Query: 1252 CMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASC 1073
MT +G ++ +N+ G+K L S+ PFTE TL TP K FE+AAE+ D LS V SC
Sbjct: 1154 NMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITPRKCFEKAAEKCHTDSLSTVVGSC 1213
Query: 1072 CWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCI 893
WGKR VGTGS FE+ W E L+++ E D Y L+++ + + S
Sbjct: 1214 SWGKRVDVGTGSQFELLWNQKE---TGLDDK-EETDVYSFLQMVRSTTSSDAFVSSPGFD 1269
Query: 892 GEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDTSCWNQQQATNG-- 719
+ +M +S S G DS + G+ + + +S W+ NG
Sbjct: 1270 VTEEEMAEWAESPERDSALGEPKFEDSAEFQNLHDDGKQSESNWEKSSSWD-----NGCS 1324
Query: 718 DGPDWNLPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQPT 539
G +W + S G + SN W + TSV ++ AWS G + + Q +
Sbjct: 1325 GGSEWGVSKSTG---GESNTESN-----WEKTTSVEKEDAWS-------GWNTKKDAQES 1369
Query: 538 SATEDVG-WGKPVSNGDGADWSQQTSAAEDVGW-SKPAGNGDDGGSWKKPTTNGDDIGWN 365
S ++ G WG + D A W ++PA +PT+ D G
Sbjct: 1370 SKSDSGGAWGIKTKDDD---------ANTTPNWETRPAQMDSIVPEINEPTS--DVWGLK 1418
Query: 364 QTAAAPEDDAGW-TQAKPNAANNSVPD---SVDWKQTTVPKDDAGW-SQPEPNTEKTSAT 200
+ P + W T++ P A ++ D S + K + D A W S+ + N++ S
Sbjct: 1419 SVSEKPWNKKNWGTESAPAAWGSTDADAWGSSNKKNSETESDAAAWGSRDKRNSDIGSGA 1478
Query: 199 ----EWNNQSVSHRSEDDAGWKQTIAPEDDGS----WKQTTAAEDD--AGW----SQPET 62
WN +S S D A W + + D + W + D AGW +
Sbjct: 1479 GVLGPWNKKS-SETESDAAAWGSSGKTKSDAATWSPWDKNNMEPDSEPAGWGSQGNMKSE 1537
Query: 61 NAAKSSASEWNAQSVT 14
+S+ + W + T
Sbjct: 1538 TETESNGASWGSSGKT 1553
>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
Length = 1867
Score = 211 bits (538), Expect = 7e-52
Identities = 155/544 (28%), Positives = 239/544 (43%), Gaps = 15/544 (2%)
Frame = -1
Query: 1600 DDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALHSLLP 1421
D RI+ +I W ++ +WV K + GDAW + + +P
Sbjct: 983 DPRIQEAKIVWVGSDATSWV--KNTQKASKGEPAVEIIVEEEEALHIGDAWRTTMDACIP 1040
Query: 1420 FMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASCMTL 1241
+ L+D R IPY + +V +LLG++ A+ ++QRL+ + ++ K K+HL+L+A+ MT
Sbjct: 1041 VLNLIDIRRSIPYGIQQVRELLGISCAFDQVVQRLSTTVRMVAKDVLKDHLVLVANSMTF 1100
Query: 1240 TGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCCWGK 1061
TG + +N AG+K + S+K VPFTE TL TP+K FE+AAE+ D L V+SC WGK
Sbjct: 1101 TGNLNGFNNAGYKATFRSLKVQVPFTESTLITPMKCFEKAAEKCHSDSLGCVVSSCSWGK 1160
Query: 1060 RAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVK--PSSLCIGE 887
A GTGS+F+I W E K +E + L Y+ L ++ D E + + E
Sbjct: 1161 HAASGTGSSFQILWN--ESQLKSNKEYGDGL--YDYLALVRTDEEKARYTFFDDVDYLAE 1216
Query: 886 DMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQDT---SCWNQQQATNGD 716
+ + DVCL +G+I G F N + +N + D T + W Q + D
Sbjct: 1217 ENEADVCLSPELDGTI-----GQPIFDDNLEEQDVQNNSSWDNGTTTNASWEQNGSAGND 1271
Query: 715 GPDWN--LPSSAADDVGWNKPASNGDGAAWNQPTSVTEDVAWSKPASNGDGADWNQPNQP 542
W ++A D G KPA+ G+ + W+ P +V K +S+ G + +
Sbjct: 1272 SDKWGGWNDAAAGADTGVTKPANQGN-SCWDVPATV------EKSSSDWGGWGTEKAKEK 1324
Query: 541 TSATEDV----GW---GKPVSNGDGADWSQQTSAAED-VGWSKPAGNGDDGGSWKKPTTN 386
+E+ W G + GA W +Q+S D W + G G +GGSW+K
Sbjct: 1325 EKISEEPAQHDAWSVQGPKRATDGGASWKKQSSTQNDGNSWKENKGRGSNGGSWEKDNAQ 1384
Query: 385 GDDIGWNQTAAAPEDDAGWTQAKPNAANNSVPDSVDWKQTTVPKDDAGWSQPEPNTEKTS 206
G A +D + AA+ W T D WS
Sbjct: 1385 KGSWGRGNDEAENNNDVQNKSWETVAADAHASTEKSWGNVTASPSDNAWS-------AAP 1437
Query: 205 ATEWNNQSVSHRSEDDAGWKQTIAPEDDGSWKQTTAAEDDAGWSQPETNAAKSSASEWNA 26
++ N S + +S+ GWK G K ++ G A S S WNA
Sbjct: 1438 VSQGNGSSDTKQSDSWDGWKSA------GVDKAINKDKESLG-----NVPASPSFSAWNA 1486
Query: 25 QSVT 14
V+
Sbjct: 1487 SPVS 1490
Score = 62.4 bits (150), Expect = 6e-07
Identities = 93/450 (20%), Positives = 160/450 (35%), Gaps = 68/450 (15%)
Frame = -1
Query: 1171 PFTEGTLKTPIKSFERAAEEGVVDRLS----GSVASCCWGKRAPVGTGSNFEIFWKDLE- 1007
P +GT+ PI F+ EE V S G+ + W + G S+ W D
Sbjct: 1226 PELDGTIGQPI--FDDNLEEQDVQNNSSWDNGTTTNASWEQNGSAGNDSDKWGGWNDAAA 1283
Query: 1006 ----GISKPLEEQCNELDAYETLEVLGVDSEG---EKVKPSSLCIGEDMDMDVCL----- 863
G++KP + + D T+E D G EK K E D
Sbjct: 1284 GADTGVTKPANQGNSCWDVPATVEKSSSDWGGWGTEKAKEKEKISEEPAQHDAWSVQGPK 1343
Query: 862 QSLTNGSIFGNKAGTDSFPRNKQSNFGR--NKPAMDQDTSCWNQQQATNGDGPDWNLPSS 689
++ G+ + ++ T + + + N GR N + ++D N Q+ + G G D ++
Sbjct: 1344 RATDGGASWKKQSSTQNDGNSWKENKGRGSNGGSWEKD----NAQKGSWGRGNDEAENNN 1399
Query: 688 AADDVGWNKPASNGDGA---AWNQPTSVTEDVAWSK-PASNGDGAD----------WNQP 551
+ W A++ + +W T+ D AWS P S G+G+ W
Sbjct: 1400 DVQNKSWETVAADAHASTEKSWGNVTASPSDNAWSAAPVSQGNGSSDTKQSDSWDGWKSA 1459
Query: 550 --------------NQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDVGWSKPAG----- 428
N P S + PVS G+ ++Q+ + + GW K AG
Sbjct: 1460 GVDKAINKDKESLGNVPASPSFSAWNASPVSQGNERSDAKQSDSWD--GW-KSAGVDKAI 1516
Query: 427 NGDDGGSWKKPTTNGDDIGWNQTAAAPEDDA-------GWTQAKPNAANNSVPDSVDWKQ 269
N D P + WN + ++ W K ++SV D W
Sbjct: 1517 NKDKESLGNVPASPSFS-AWNAAPVSQGNERLDAKQSDSWDGWKSAGVDDSVKDKESWGN 1575
Query: 268 TTVPKDDAGW-----SQPEPNTEKTSATEWNNQSVS----HRSEDDAGWKQTIAPEDDGS 116
D+ W SQ +++ + W+ + ++D W A D +
Sbjct: 1576 VPASPSDSAWNAAPVSQGNESSDAKQSDSWDGWKSAGVDASTNKDKESWGNVPASPSDSA 1635
Query: 115 WKQTTAAEDDAGWSQPETNAAKSSASEWNA 26
W ++ D W+ E N +++ +W +
Sbjct: 1636 WNAAPVSQGDDVWNSAEANESRN--KDWKS 1663
>ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Populus trichocarpa]
gi|550346662|gb|EEE84012.2| hypothetical protein
POPTR_0001s06460g [Populus trichocarpa]
Length = 888
Score = 211 bits (537), Expect = 9e-52
Identities = 161/557 (28%), Positives = 252/557 (45%), Gaps = 33/557 (5%)
Frame = -1
Query: 1609 VKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXXXVTQRGDAWEKALHS 1430
V GD RI I W +QE+ TW+ + +R + V Q GDAW L S
Sbjct: 9 VSGDHRISCANIIWASQETTTWI--RNPSRTQKGELALDIVLEKSVVKQSGDAWRIVLDS 66
Query: 1429 LLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELLGKGAYKNHLLLIASC 1250
LP + L+D +R +PY++ +V +LLGV+ A+ +QRL+ ++ ++ KG K HL+L+ +
Sbjct: 67 CLPVLHLIDTTRSVPYAIKQVQELLGVSCAFDQAVQRLSKSVTMVAKGVLKEHLILLGNS 126
Query: 1249 MTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAEEGVVDRLSGSVASCC 1070
MT G +I + G+K L S+ VPFTE TL TP K FE+AAE+ D LS VASC
Sbjct: 127 MTCAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEKCHTDYLSSIVASCS 186
Query: 1069 WGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGVDSEGEKVKPSSLCIG 890
WGK VGTGS F++ W E P +DAY L ++ + GE + + C+G
Sbjct: 187 WGKHVTVGTGSRFDVLWDTKEACLNPE----GGIDAYSFLNMVRSTAGGE--ESVTACLG 240
Query: 889 EDMDMDVCLQ-----------SLTNGSIFGNKAGTDSFPRNK--QSNFGRNKPAMDQDTS 749
++D D+ L+ S ++ F + A F N+ +SN+G+ D S
Sbjct: 241 AEVD-DLILEDEDWNLSPEHHSSSDKPTFEDSAEFQDFLGNQPAESNWGKASSLKDGSWS 299
Query: 748 CWNQQQATN---GDGPDWNLPSSAAD--DVGWNKPASNGDGAAWNQPTSVTEDVAWS--- 593
N N G W+L S+A+ DVGW+ A+ ++WN VT+ + S
Sbjct: 300 AGNWDVDKNDSAGKEKPWSLGMSSAETNDVGWDTAATRKINSSWNSENDVTQSNSLSGWA 359
Query: 592 -KPASNGDGADWNQPNQPTSATE-DVG--WGKPVSNGDGADWSQQTSAAEDVGWSKPAGN 425
K + +G +P + + DVG WG+ + A+ ++ W +
Sbjct: 360 TKKSETHNGFATKVQEKPARSNDWDVGTAWGRKAGDNKFANVTK--------SWWGKVTD 411
Query: 424 GDDGGSWKKPTTNGDD----IGWNQTAAAPEDDAGW----TQAKPNAANNSVPDSVDWKQ 269
GD+ K D GW+ + + +GW TQ + +S SV W
Sbjct: 412 GDESEQNKNKQRQEDQELGTHGWDDKMSPDQLISGWASTTTQEATTESCSSKAASV-WGT 470
Query: 268 TTVPKDDAGWSQPEPNTEKTSATEWNNQSVSHRSEDDAGWKQTIAPEDDGSWKQTTAAED 89
D+ G + +++WN +S S++++ G K SW D
Sbjct: 471 KNTNVDEQGSENHVLLNQAKESSDWNKKSNSNQTDAACGSKAA------SSWGAKNTDAD 524
Query: 88 DAGWSQPETNAAKSSAS 38
+ + N A +S S
Sbjct: 525 KRWGRKVDLNQADTSCS 541
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 211 bits (536), Expect = 1e-51
Identities = 173/643 (26%), Positives = 270/643 (41%), Gaps = 36/643 (5%)
Frame = -1
Query: 1834 KKSHPLNSFVDNLRLQACDACDIAQRSGNDGFAKPCLHFALTKESYLASKGHSHSFYSDL 1655
KK + N L A + C PCL F L L + + L
Sbjct: 980 KKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPCLMFFLQATDDLETT-------TTL 1032
Query: 1654 YLMVDVLYPRLAETTVKGDDRIEAVRISWNNQESKTWVASKKGTRNKXXXXXXXXXXXXX 1475
D++ P L ET +KGD RI + I W + ++ TW+ S +++
Sbjct: 1033 QYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPN--KSQKGEWALDIVLEKS 1090
Query: 1474 XVTQRGDAWEKALHSLLPFMELLDDSRCIPYSVHEVYKLLGVAAAYQLIIQRLTLALELL 1295
+ Q GDAW L S LP + L+D R IPY++ ++ +LLGV+ A+ +QRL+ A+ ++
Sbjct: 1091 VIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQAVQRLSTAVTMV 1150
Query: 1294 GKGAYKNHLLLIASCMTLTGKVIAYNAAGFKDLYNSMKYPVPFTEGTLKTPIKSFERAAE 1115
KG K HL+L+A+ MT G + +N++G+K L ++ VPFTE TL TP K FERAAE
Sbjct: 1151 AKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLFTPRKCFERAAE 1210
Query: 1114 EGVVDRLSGSVASCCWGKRAPVGTGSNFEIFWKDLEGISKPLEEQCNELDAYETLEVLGV 935
+ +D L+ VASC WGK VGTG F++ W D + E LD + L ++
Sbjct: 1211 KCHMDSLASIVASCSWGKHVAVGTGVRFDVLW-DTREVELTQE---GGLDVFNFLHMV-- 1264
Query: 934 DSEGEKVKPSSLCIGEDMDMDVCLQSLTNGSIFGNKAGTDSFPRNKQSNFGRNKPAMDQD 755
S + ++ +G ++D + + + + S + P + +K +
Sbjct: 1265 -STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEFDDKLGDLPE 1323
Query: 754 TSCWNQQQATNGD---GPDW----NLPSSAADDV----GWNKPASNGDGAAWNQPTSVTE 608
S W + + + D G DW N+ + A DV G K + +A Q S
Sbjct: 1324 KSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSSWGTEKGKTQDSNSAEAQLDSKKS 1383
Query: 607 DV-----AWSK-PASNGDGADWNQPNQPTSATEDVGWGKPVSNGDGADWSQQTSAAEDV- 449
V AW K PA + W T+A+E+ G+ V D A S + S +
Sbjct: 1384 SVLDTSSAWGKNPAKENTTSTWG----TTTASENDWCGRGVGEDDSATLSGKKSGVLNTS 1439
Query: 448 -GWSKPAGNGDDGGSW-KKPTTNGDDIGWNQTAAAPEDDAGWTQAKPNAANNSV------ 293
W+ D +W P W T A D G + ++A+ SV
Sbjct: 1440 SAWATNTAREDAASAWGTNPAKENSTSTWGTTRANENDWCGREVGQDDSASLSVKKSSVL 1499
Query: 292 PDSVDWKQTTVPKDDAGWSQPEPNTEKTSAT---------EWNNQSVSHRSEDDAGWKQT 140
S W T +D A P E T++T +W + V H K++
Sbjct: 1500 DTSSAWATNTAREDAASAWGKHPAKENTTSTWGTTTASENDWCGRGVGHDDSASLSGKKS 1559
Query: 139 IAPEDDGSWKQTTAAED-DAGWSQPETNAAKSSASEWNAQSVT 14
W TA ED + W + A +++ S W + +
Sbjct: 1560 SVLNTSSVWATNTAREDATSAWG--KNPAKENTTSTWGTTTAS 1600