BLASTX nr result

ID: Ephedra25_contig00008917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00008917
         (705 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16531.1| unknown [Picea sitchensis]                              58   3e-06
gb|ABK21419.1| unknown [Picea sitchensis]                              58   3e-06

>gb|ABR16531.1| unknown [Picea sitchensis]
          Length = 183

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
 Frame = -2

Query: 482 QSLLEEYAKHMICNCNEVIVGESVRD-MDMADGLRGGEIYFLLPKTRLNSVFTKADMASM 306
           Q +L EY  H ICN + + VG+++   +   D L+ G++YFLLP+ +L  V T +DMAS+
Sbjct: 38  QEILREYEGHFICNSDGLYVGQNISQILGDDDRLQIGQLYFLLPQRKLQFVLTDSDMASL 97

Query: 305 VSKANYAIANLPK----------FSFRKEEAQIVMCHYYQDSELTLLQHSSSSKFMKR-- 162
           +SK +  ++   K          F   + + Q +   + Q  E     H SS+  M R  
Sbjct: 98  LSKISTTLSAQKKKRQSRRLSCGFGKAQVQVQPLFDIHSQHDECGEEYHYSSACCMSRRQ 157

Query: 161 --PL---------KWSSKLSPISE 123
             P+         +W SKL  I+E
Sbjct: 158 MIPISTPRSRGRTQWQSKLETIAE 181


>gb|ABK21419.1| unknown [Picea sitchensis]
          Length = 187

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 30/153 (19%)
 Frame = -2

Query: 488 RVQSLLEEYAKHMICNCNEVIVGESVRDMDMADG-LRGGEIYFLLPKTRLNSVFTKADMA 312
           R Q +L EY  H ICN + + +G ++  +   D  LR G++Y LLP+ +L  V T +DMA
Sbjct: 34  RSQEILREYPGHFICNSDGLYIGRNISQVLRDDDQLRIGQLYCLLPRRKLQFVLTDSDMA 93

Query: 311 SMVSKANYAIANLPK---------FSFRKEEAQIVMC------HYYQDSELTLLQHSSSS 177
           S++ K N A+  L +         + F K + Q+         H + +S       SSSS
Sbjct: 94  SLLCKINTALLALQEKKRQSRRLSWGFCKAQVQVQPLFDIHSQHDHDESGEEYYYESSSS 153

Query: 176 KFMKRPL--------------KWSSKLSPISEA 120
                 L               W SKL PI E+
Sbjct: 154 LCCMSRLPNIPNSIPTRRGRNHWQSKLEPIEES 186


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