BLASTX nr result

ID: Ephedra25_contig00008856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00008856
         (1206 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339181.1| PREDICTED: fasciclin-like arabinogalactan pr...    59   3e-06
gb|ABI95417.1| fasciclin-like protein FLA27 [Triticum aestivum]        59   3e-06
gb|ABI95409.1| fasciclin-like protein FLA19 [Triticum aestivum]        59   4e-06
dbj|BAB08961.1| unnamed protein product [Arabidopsis thaliana]         58   7e-06
ref|XP_002871217.1| beta-Ig-H3 domain-containing protein [Arabid...    58   7e-06
ref|NP_196257.2| fasciclin-like arabinogalactan protein 17 precu...    58   7e-06
ref|XP_003559349.1| PREDICTED: fasciclin-like arabinogalactan pr...    58   9e-06

>ref|XP_006339181.1| PREDICTED: fasciclin-like arabinogalactan protein 16-like [Solanum
           tuberosum]
          Length = 453

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
 Frame = -3

Query: 262 SKLLIFGVCVVLTMGGISCSENP--------------LLKGLAESDFSALASLIRKASVM 125
           + L +F + +  T+ G +  ENP              +L  L +S ++ L+ L+ KA ++
Sbjct: 9   TNLFLFTITLFFTITGATFQENPKSPISTVPQINSNSILVALLDSHYTELSELVEKALLL 68

Query: 124 GALENATHRHNVTILAPQDEWFRGDGGKTFRRFLIEEGN 8
             LE A  +HN+TI AP++E    D    F+RFL+E GN
Sbjct: 69  QTLEEAVSKHNITIFAPKNEALERDLDPEFKRFLLEPGN 107


>gb|ABI95417.1| fasciclin-like protein FLA27 [Triticum aestivum]
          Length = 482

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 253 LIFGVCVVLTMGGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAP 74
           ++     V+   G   + N +L  L +S ++ LA L+ KA ++  LE+A  RHNVTI AP
Sbjct: 46  VVAAAAAVVNASGAGVNSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGRHNVTIFAP 105

Query: 73  QDEWFRGDGGKTFRRFLIEEGN 8
           ++E    D    F+RFL+E  N
Sbjct: 106 RNEALERDLDPEFKRFLLEPRN 127


>gb|ABI95409.1| fasciclin-like protein FLA19 [Triticum aestivum]
          Length = 480

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 253 LIFGVCVVLTMGGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAP 74
           ++     V+   G   + N +L  L +S ++ LA L+ KA ++  LE+A  RHNVTI AP
Sbjct: 44  VVVAAAAVVNGSGAGVNSNSVLVALLDSHYTELAELVEKALLLQTLEDAVGRHNVTIFAP 103

Query: 73  QDEWFRGDGGKTFRRFLIEEGN 8
           ++E    D    F+RFL+E  N
Sbjct: 104 RNEALERDLDPEFKRFLLEPRN 125


>dbj|BAB08961.1| unnamed protein product [Arabidopsis thaliana]
          Length = 465

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = -3

Query: 220 GGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAPQDEWFRGDGGK 41
           G    + N +L  L +S ++ LA L+ KA ++  LE+A  RHN+TI AP++E    D   
Sbjct: 38  GSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDP 97

Query: 40  TFRRFLIEEGN 8
            F+RFL+E GN
Sbjct: 98  EFKRFLLEPGN 108


>ref|XP_002871217.1| beta-Ig-H3 domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317054|gb|EFH47476.1| beta-Ig-H3
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = -3

Query: 220 GGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAPQDEWFRGDGGK 41
           G    + N +L  L +S ++ LA L+ KA ++  LE+A  RHN+TI AP++E    D   
Sbjct: 38  GSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDP 97

Query: 40  TFRRFLIEEGN 8
            F+RFL+E GN
Sbjct: 98  EFKRFLLEPGN 108


>ref|NP_196257.2| fasciclin-like arabinogalactan protein 17 precursor [Arabidopsis
           thaliana] gi|75115364|sp|Q66GR0.1|FLA17_ARATH RecName:
           Full=Fasciclin-like arabinogalactan protein 17; Flags:
           Precursor gi|51536454|gb|AAU05465.1| At5g06390
           [Arabidopsis thaliana] gi|56121932|gb|AAV74247.1|
           At5g06390 [Arabidopsis thaliana]
           gi|332003626|gb|AED91009.1| fasciclin-like
           arabinogalactan protein 17 precursor [Arabidopsis
           thaliana]
          Length = 458

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = -3

Query: 220 GGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAPQDEWFRGDGGK 41
           G    + N +L  L +S ++ LA L+ KA ++  LE+A  RHN+TI AP++E    D   
Sbjct: 38  GSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDP 97

Query: 40  TFRRFLIEEGN 8
            F+RFL+E GN
Sbjct: 98  EFKRFLLEPGN 108


>ref|XP_003559349.1| PREDICTED: fasciclin-like arabinogalactan protein 16-like
           [Brachypodium distachyon]
          Length = 483

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = -3

Query: 232 VLTMGGISCSENPLLKGLAESDFSALASLIRKASVMGALENATHRHNVTILAPQDEWFRG 53
           V+   G   S N +L  L +S ++ L+ L+ KA ++  LE+A  RHNVTI AP++E    
Sbjct: 51  VVNGSGAGISSNSVLVALLDSHYTELSELVEKALLLQTLEDAVGRHNVTIFAPRNEALER 110

Query: 52  DGGKTFRRFLIEEGN 8
           D    F+RFL+E  N
Sbjct: 111 DLDPEFKRFLLEPRN 125


Top