BLASTX nr result
ID: Ephedra25_contig00008781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00008781
(930 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004167120.1| PREDICTED: protein LHY-like, partial [Cucumi... 85 3e-14
ref|XP_004140527.1| PREDICTED: protein LHY-like [Cucumis sativus] 85 3e-14
ref|XP_006829218.1| hypothetical protein AMTR_s00001p00272270 [A... 81 6e-13
gb|EXC13655.1| Protein LHY [Morus notabilis] 80 1e-12
ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Popu... 79 3e-12
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm... 79 3e-12
ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circ... 78 4e-12
dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|2196... 78 5e-12
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera] 76 2e-11
ref|NP_001235187.1| late elongated hypocotyl and circadian clock... 75 3e-11
ref|XP_006604919.1| PREDICTED: protein LHY isoform X2 [Glycine max] 75 4e-11
ref|XP_006604918.1| PREDICTED: protein LHY isoform X1 [Glycine max] 75 4e-11
ref|XP_006604920.1| PREDICTED: protein LHY isoform X3 [Glycine max] 75 4e-11
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera] 75 5e-11
ref|NP_850461.1| protein CCA1 [Arabidopsis thaliana] gi|20197321... 73 2e-10
ref|NP_850460.1| protein CCA1 [Arabidopsis thaliana] gi|75319073... 73 2e-10
ref|XP_002320238.2| hypothetical protein POPTR_0014s10260g [Popu... 72 2e-10
ref|XP_006293847.1| hypothetical protein CARUB_v10022831mg [Caps... 72 2e-10
gb|ABK96054.1| unknown [Populus trichocarpa] 72 2e-10
gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [T... 71 5e-10
>ref|XP_004167120.1| PREDICTED: protein LHY-like, partial [Cucumis sativus]
Length = 662
Score = 85.1 bits (209), Expect = 3e-14
Identities = 83/296 (28%), Positives = 127/296 (42%), Gaps = 7/296 (2%)
Frame = -3
Query: 928 KSPAEKEAH------RNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGT 767
K+PAE E H R DRSS GSNTP +
Sbjct: 443 KTPAEVEFHDSNKGKRGKQVDRSSCGSNTP-----------------------------S 473
Query: 766 GSSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVS 587
GS I+A ++ N + +ND+ ++ RR + ++ + WK VS
Sbjct: 474 GSDQEIDA--TENNDKEEKEEENDLEMNRPAV-------ELSNRRNRSISNTSESWKEVS 524
Query: 586 EEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVT 407
+EGRLAFQALF +DVLPQSFSP P ++ ++ +V + S ++ GA V
Sbjct: 525 DEGRLAFQALFTRDVLPQSFSP--------PYDVENENKASENVEKDSHVVDKDSGASVL 576
Query: 406 SINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDN 227
+N GS + + S + +A I++G +
Sbjct: 577 DLNGKTCGS-----------FSHQSMERDTSAIG------INNGEGELLTIGL------- 612
Query: 226 QSKISGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQEV 62
GNG + R F PY RCS+EAK+ R+ + + +C+EG +KR+ L+Q+V
Sbjct: 613 -----GNGTPKACRTGFKPYKRCSVEAKEKRM-TTSSNHCEEGG--QKRLRLEQKV 660
>ref|XP_004140527.1| PREDICTED: protein LHY-like [Cucumis sativus]
Length = 733
Score = 85.1 bits (209), Expect = 3e-14
Identities = 83/296 (28%), Positives = 127/296 (42%), Gaps = 7/296 (2%)
Frame = -3
Query: 928 KSPAEKEAH------RNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGT 767
K+PAE E H R DRSS GSNTP +
Sbjct: 514 KTPAEVEFHDSNKGKRGKQVDRSSCGSNTP-----------------------------S 544
Query: 766 GSSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVS 587
GS I+A ++ N + +ND+ ++ RR + ++ + WK VS
Sbjct: 545 GSDQEIDA--TENNDKEEKEEENDLEMNRPAV-------ELSNRRNRSISNTSESWKEVS 595
Query: 586 EEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVT 407
+EGRLAFQALF +DVLPQSFSP P ++ ++ +V + S ++ GA V
Sbjct: 596 DEGRLAFQALFTRDVLPQSFSP--------PYDVENENKASENVEKDSHVVDKDSGASVL 647
Query: 406 SINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDN 227
+N GS + + S + +A I++G +
Sbjct: 648 DLNGKTCGS-----------FSHQSMERDTSAIG------INNGEGELLTIGL------- 683
Query: 226 QSKISGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQEV 62
GNG + R F PY RCS+EAK+ R+ + + +C+EG +KR+ L+Q+V
Sbjct: 684 -----GNGTPKACRTGFKPYKRCSVEAKEKRM-TTSSNHCEEGG--QKRLRLEQKV 731
>ref|XP_006829218.1| hypothetical protein AMTR_s00001p00272270 [Amborella trichopoda]
gi|548834197|gb|ERM96634.1| hypothetical protein
AMTR_s00001p00272270 [Amborella trichopoda]
Length = 811
Score = 80.9 bits (198), Expect = 6e-13
Identities = 89/283 (31%), Positives = 121/283 (42%), Gaps = 9/283 (3%)
Frame = -3
Query: 886 DRSSSGSNTPES---ETDPILRNNTGMGKEAGEKLCDFDGLGTGSSDVIEACVSDRNKGQ 716
DRSS GSN S ETD + +N+ G KEA S V E C S
Sbjct: 590 DRSSCGSNASSSSDIETDNLEKNDEG--KEA--------------SPVAEFCYS------ 627
Query: 715 STVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVSEEGRLAFQALFDQDVLP 536
G+ GRR++ G D WK VSE GRLAFQALF ++VLP
Sbjct: 628 ---------------------GNEFGRRSRTAGAISDSWKEVSEGGRLAFQALFSREVLP 666
Query: 535 QSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVTSINHDFIGSN-GMWREP 359
QSFSP P + D S+A+ + G ++ +D +K + + N W E
Sbjct: 667 QSFSP--------PHNQKDKTSNATHI---DGEVKRKDMSKSSDSKEGNVDLNTATWVE- 714
Query: 358 TFSLYENNSQVPEATASDCSLECLIDSGR-NSPM-NDTTSDCKQDNQSKISGNGNMRPGR 185
C+ E D+ R N P + S+ ++ N + NG ++ R
Sbjct: 715 ----------------DHCTNEDSSDTTRGNRPQTGSSVSEEEKGNGKTDTLNGKLQACR 758
Query: 184 -AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREE--KRICLKQE 65
F PY RCS+EAK+ RL +G RE+ KRI L+ E
Sbjct: 759 MGFEPYKRCSVEAKECRL--------VDGTREKGLKRIRLEHE 793
>gb|EXC13655.1| Protein LHY [Morus notabilis]
Length = 911
Score = 80.1 bits (196), Expect = 1e-12
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 4/294 (1%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKD-RSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLG--TGSS 758
KSPA + S + S S + E K G K D G T SS
Sbjct: 665 KSPAASSSDSEESGSAKHKSNSKAADHENAAATTELHDSNKAKGRKQVDRSSCGSNTASS 724
Query: 757 DVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVSEEG 578
+E ++++ + + + + DA + ++I RR+K ++ D WK VSEEG
Sbjct: 725 SEVETDALEKHENE----KEESKEPDAD----NPIAEMINRRSKSNSNTSDSWKEVSEEG 776
Query: 577 RLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVTSIN 398
RLAFQALF ++VLPQSFSP P ++ Q + +D + E +DG
Sbjct: 777 RLAFQALFSREVLPQSFSP--------PYDDENNQENQNDHAKEKQMEEDKDGGA----- 823
Query: 397 HDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDNQSK 218
SL + N + S+ + SP D D + +
Sbjct: 824 ---------------SLLDLNIRTSNLQESE---------KKESPRGDNNLD--EGLLTI 857
Query: 217 ISGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQEVE 59
G G ++ R F PY RCS+EAK++ + S +Q ++G KR+ L+ EV+
Sbjct: 858 GLGYGKLKARRTGFKPYKRCSVEAKENLVGSTASQGEEKGT---KRLRLEGEVQ 908
>ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Populus trichocarpa]
gi|566158675|ref|XP_006386664.1| hypothetical protein
POPTR_0002s18190g [Populus trichocarpa]
gi|566158677|ref|XP_002301449.2| hypothetical protein
POPTR_0002s18190g [Populus trichocarpa]
gi|550345281|gb|ERP64460.1| hypothetical protein
POPTR_0002s18190g [Populus trichocarpa]
gi|550345282|gb|ERP64461.1| hypothetical protein
POPTR_0002s18190g [Populus trichocarpa]
gi|550345283|gb|EEE80722.2| hypothetical protein
POPTR_0002s18190g [Populus trichocarpa]
Length = 768
Score = 78.6 bits (192), Expect = 3e-12
Identities = 85/303 (28%), Positives = 123/303 (40%), Gaps = 18/303 (5%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGS---NTPESETDPILRNNT----GMGKEAGEKLCDFDGLG 770
A+ A + P S D SG NT TD L + GK K D G
Sbjct: 514 AQNSASKPPTLSSSDSEESGGTKLNTAPKVTDHELNSKAPEVQDSGKTKSRKQVDRSSCG 573
Query: 769 --TGSSDVIEACVSDRN-KGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIW 599
T SS IE ++N KG+ + D N H ++ RR++ D W
Sbjct: 574 SNTPSSSEIETDALEKNEKGKEEPKEADAN---------HPASELNCRRSRSSSSMSDSW 624
Query: 598 KSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDG 419
K VSEEGRLAFQALF ++ LPQSFSP + ++ ++D + D E
Sbjct: 625 KEVSEEGRLAFQALFTRERLPQSFSPPHDLKSKMHQKEDTEEKKNPD--------EKDGD 676
Query: 418 AKVTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDC 239
A + +N G ++E E N+ VP C
Sbjct: 677 ASLLDLNSKTWGYCSGYQEG-----EKNAVVPR--------------------------C 705
Query: 238 KQDNQSKI----SGNGNMRPG-RAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICL 74
D + + G+GN++ F PY RCS+EAK+ R+ + Q ++G KR+ L
Sbjct: 706 VNDGEEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMGTTGGQGEEKG---PKRLRL 762
Query: 73 KQE 65
++E
Sbjct: 763 ERE 765
>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
gi|223545573|gb|EEF47077.1| conserved hypothetical
protein [Ricinus communis]
Length = 768
Score = 78.6 bits (192), Expect = 3e-12
Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 10/287 (3%)
Frame = -3
Query: 925 SPAEKEAHRNPSKDRSSSGSN----TPESET-DPILRNNTGMGKEAGEKLCDFDGLGTGS 761
S ++ E P K+ S ++ TP E DP + K A C G T S
Sbjct: 525 SLSDSEESGGPKKNTGSKATDHEMATPAPEVQDP---SKAKARKPADRSSC---GSNTSS 578
Query: 760 SDVIEACVSDR-NKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVSE 584
S +E ++ KG + + D N + C RR++ D WK VSE
Sbjct: 579 SSEVETDALEKLEKGNEELKETDTNPEPTES-SC--------RRSRSNSSISDSWKEVSE 629
Query: 583 EGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVTS 404
EGRLAFQALF ++VLPQSFSP + E QKD+I+ + +E + A + S
Sbjct: 630 EGRLAFQALFSREVLPQSFSPPHVLK-NEARQKDEIEE------DKQNTVEKNENALLLS 682
Query: 403 INHDFIG---SNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQ 233
+N + G S+ + ENN + + L+ G
Sbjct: 683 LNGNISGFCTSHQEAEKIEMPRCENNGE-----------DGLLTFG-------------- 717
Query: 232 DNQSKISGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAR 95
G+G ++ R F PY RCS+EAK++R+ + +Q ++G +
Sbjct: 718 ------LGHGKLKARRTGFKPYKRCSVEAKENRMLTAGSQGEEKGPK 758
>ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circadian clock
associated-1-like protein 1 isoform X1 [Glycine max]
gi|571523805|ref|XP_006598674.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X2 [Glycine max]
gi|571523809|ref|XP_006598675.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X3 [Glycine max]
gi|571523813|ref|XP_006598676.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X4 [Glycine max]
gi|571523816|ref|XP_006598677.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X5 [Glycine max]
gi|571523820|ref|XP_006598678.1| PREDICTED: late
elongated hypocotyl and circadian clock associated-1-like
protein 1 isoform X6 [Glycine max]
Length = 750
Score = 78.2 bits (191), Expect = 4e-12
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 1/289 (0%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGTGSSDVI 749
KSPA + + ++ S + ET+ + + K G K D G+ ++
Sbjct: 513 KSPAAILSDSESGDAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASSS 572
Query: 748 EACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVSEEGRLA 569
+ KG+ + ++ + I R + + D WK VSEEGRLA
Sbjct: 573 DVETDALEKGEKGKEEPEIPDANQLAIE-------FSNRRRSVSNLTDSWKEVSEEGRLA 625
Query: 568 FQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVTSINHDF 389
FQALF ++VLPQSFSP + + Q D+ + ++ + E DG+K S N++
Sbjct: 626 FQALFSREVLPQSFSPPHALKNTD-HQMDNANDNKQNIDDKD---EDLDGSKKCSSNYEA 681
Query: 388 IGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDNQSKISG 209
+ N ++ ENN E L+ G G
Sbjct: 682 MQKNLLF-------VENN-------------EGLLTIG--------------------LG 701
Query: 208 NGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
G ++ R F PY RCS+EAK++R+ + Q ++G KRI L+ E
Sbjct: 702 QGKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGC---KRIRLEGE 747
>dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|219687747|dbj|BAH09384.1|
PnLHY1 [Populus nigra]
Length = 768
Score = 77.8 bits (190), Expect = 5e-12
Identities = 81/303 (26%), Positives = 121/303 (39%), Gaps = 18/303 (5%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGS---NTPESETDPILRNNT----GMGKEAGEKLCDFDGLG 770
A+ A + P S D SG NT TD L + GK K D G
Sbjct: 514 AQNSASKPPTLSSSDSEESGGTKLNTGPKVTDDELNSKAPEVQDSGKTKSRKQVDRSSCG 573
Query: 769 TG---SSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIW 599
+ SS++ + KG+ + D N H + RR++ D W
Sbjct: 574 SNTPSSSEIETDALEKTEKGKEEPKEADAN---------HPASESNCRRSRSSSSMSDSW 624
Query: 598 KSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDG 419
K VSEEGRLAFQALF +++LPQSFSP + ++ ++D + D E
Sbjct: 625 KEVSEEGRLAFQALFTREILPQSFSPPHDLKSKMHQKEDTEEKKNPD--------EKDGD 676
Query: 418 AKVTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDC 239
A + +N G ++E E N+ VP C
Sbjct: 677 ASLLDLNSKTWGYCSGYQEG-----EKNAVVPR--------------------------C 705
Query: 238 KQDNQSKI----SGNGNMRPG-RAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICL 74
D + + G+GN++ F PY RCS+EAK+ R+ + Q ++G KR+ L
Sbjct: 706 VNDGEEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMATTGGQGEEKG---PKRLRL 762
Query: 73 KQE 65
++E
Sbjct: 763 ERE 765
>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
Length = 771
Score = 76.3 bits (186), Expect = 2e-11
Identities = 87/303 (28%), Positives = 124/303 (40%), Gaps = 17/303 (5%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGSNTPESE-TDPILRNNTGMGKEAGE-------KLCDFDGL 773
A+ A ++P S D SG P +E T P NT E + K D
Sbjct: 517 AQHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDRSSC 576
Query: 772 GTG---SSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDI 602
G+ SS+V + G+ + DVN+ A G+ RR + +
Sbjct: 577 GSNTPSSSEVETDALEKHENGEEECKEADVNQ---------AAGEANNRRCRSTSILNES 627
Query: 601 WKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQD 422
WK VSEEGRLAF+ALF ++VLPQSFSP + + KD I++ + ++L
Sbjct: 628 WKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLDL 687
Query: 421 GAKV--TSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTT 248
+K +H + NG L EN+++ E L+ G
Sbjct: 688 NSKAWGPCSSHQDVEKNG--------LMENDNRE----------EGLLTIGL-------- 721
Query: 247 SDCKQDNQSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGARE-EKRICLK 71
KI G R G F PY RCS+EA + SR T C +G + KRI L+
Sbjct: 722 ------GYGKIKGR---RTG--FKPYKRCSVEA----IDSRVTNCCSQGEEKGPKRIRLE 766
Query: 70 QEV 62
+V
Sbjct: 767 GDV 769
>ref|NP_001235187.1| late elongated hypocotyl and circadian clock associated-1-like
protein 1 [Glycine max] gi|158999368|gb|ABW87008.1| late
elongated hypocotyl and circadian clock associated-1-like
protein 1 [Glycine max]
Length = 749
Score = 75.5 bits (184), Expect = 3e-11
Identities = 75/289 (25%), Positives = 120/289 (41%), Gaps = 1/289 (0%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGTGSSDVI 749
KSPA + + ++ S + ET+ + + K G K D G+ ++
Sbjct: 513 KSPAATLSDSESGDAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASSS 572
Query: 748 EACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVSEEGRLA 569
+ KG+ + ++ + I R + + D WK VSEEGRLA
Sbjct: 573 DVETDALEKGEKGKEEPEIPDANQLAIE-------FSNRRRSVSNLTDSWKEVSEEGRLA 625
Query: 568 FQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVTSINHDF 389
FQALF ++VLPQSFSP + + Q D+ + ++ + E DG K +S N++
Sbjct: 626 FQALFSREVLPQSFSPPHALKNTD-HQMDNANDNKQNIDDKD---EDLDGKKCSS-NYEA 680
Query: 388 IGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDNQSKISG 209
+ N ++ ENN E L+ G G
Sbjct: 681 MQKNLLF-------VENN-------------EGLLTIG--------------------LG 700
Query: 208 NGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
G ++ R F PY RCS+EAK++R+ + Q ++G KRI L+ E
Sbjct: 701 QGKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGC---KRIRLEGE 746
>ref|XP_006604919.1| PREDICTED: protein LHY isoform X2 [Glycine max]
Length = 818
Score = 75.1 bits (183), Expect = 4e-11
Identities = 86/296 (29%), Positives = 125/296 (42%), Gaps = 8/296 (2%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKDRSSSGSNTPES----ETDPILRNNTGMGKEAGEKLCDFDGLG--- 770
KSPA + S++R + NT ET+ ++ N K G K D G
Sbjct: 578 KSPA---VFSSKSEERGDANLNTSPKATNHETNQVISENPDSNKMKGRKPVDRSSCGSNT 634
Query: 769 TGSSDVIEACVSD-RNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKS 593
T SS+ E + D + K + P D N D ++ RR++ + D WK
Sbjct: 635 TSSSEETELLLKDEKEKEEPKTP--DANILDT---------ELSNRRSRSINNLTDSWKE 683
Query: 592 VSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAK 413
VSEEGRLAFQALF ++VLPQSFSP + E Q D I+ + + + +E +K
Sbjct: 684 VSEEGRLAFQALFSREVLPQSFSPTHDL-INEDNQIDSIKDNDQNTDYKDEDLE----SK 738
Query: 412 VTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQ 233
S N D + N ++ + +NN + E L+ G
Sbjct: 739 KCSSNCDGVQKNLLF------VKDNNEE-----------EGLLIIGLG------------ 769
Query: 232 DNQSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
G RP F PY RCS+EA ++R+ + Q ++G KRI L E
Sbjct: 770 ------PGKLKTRP-TGFKPYKRCSVEANENRIGTACNQGEEKG---PKRIRLNGE 815
>ref|XP_006604918.1| PREDICTED: protein LHY isoform X1 [Glycine max]
Length = 819
Score = 75.1 bits (183), Expect = 4e-11
Identities = 86/296 (29%), Positives = 125/296 (42%), Gaps = 8/296 (2%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKDRSSSGSNTPES----ETDPILRNNTGMGKEAGEKLCDFDGLG--- 770
KSPA + S++R + NT ET+ ++ N K G K D G
Sbjct: 579 KSPA---VFSSKSEERGDANLNTSPKATNHETNQVISENPDSNKMKGRKPVDRSSCGSNT 635
Query: 769 TGSSDVIEACVSD-RNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKS 593
T SS+ E + D + K + P D N D ++ RR++ + D WK
Sbjct: 636 TSSSEETELLLKDEKEKEEPKTP--DANILDT---------ELSNRRSRSINNLTDSWKE 684
Query: 592 VSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAK 413
VSEEGRLAFQALF ++VLPQSFSP + E Q D I+ + + + +E +K
Sbjct: 685 VSEEGRLAFQALFSREVLPQSFSPTHDL-INEDNQIDSIKDNDQNTDYKDEDLE----SK 739
Query: 412 VTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQ 233
S N D + N ++ + +NN + E L+ G
Sbjct: 740 KCSSNCDGVQKNLLF------VKDNNEE-----------EGLLIIGLG------------ 770
Query: 232 DNQSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
G RP F PY RCS+EA ++R+ + Q ++G KRI L E
Sbjct: 771 ------PGKLKTRP-TGFKPYKRCSVEANENRIGTACNQGEEKG---PKRIRLNGE 816
>ref|XP_006604920.1| PREDICTED: protein LHY isoform X3 [Glycine max]
Length = 749
Score = 75.1 bits (183), Expect = 4e-11
Identities = 86/296 (29%), Positives = 125/296 (42%), Gaps = 8/296 (2%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKDRSSSGSNTPES----ETDPILRNNTGMGKEAGEKLCDFDGLG--- 770
KSPA + S++R + NT ET+ ++ N K G K D G
Sbjct: 509 KSPA---VFSSKSEERGDANLNTSPKATNHETNQVISENPDSNKMKGRKPVDRSSCGSNT 565
Query: 769 TGSSDVIEACVSD-RNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKS 593
T SS+ E + D + K + P D N D ++ RR++ + D WK
Sbjct: 566 TSSSEETELLLKDEKEKEEPKTP--DANILDT---------ELSNRRSRSINNLTDSWKE 614
Query: 592 VSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAK 413
VSEEGRLAFQALF ++VLPQSFSP + E Q D I+ + + + +E +K
Sbjct: 615 VSEEGRLAFQALFSREVLPQSFSPTHDL-INEDNQIDSIKDNDQNTDYKDEDLE----SK 669
Query: 412 VTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQ 233
S N D + N ++ + +NN + E L+ G
Sbjct: 670 KCSSNCDGVQKNLLF------VKDNNEE-----------EGLLIIGLG------------ 700
Query: 232 DNQSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
G RP F PY RCS+EA ++R+ + Q ++G KRI L E
Sbjct: 701 ------PGKLKTRP-TGFKPYKRCSVEANENRIGTACNQGEEKG---PKRIRLNGE 746
>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
Length = 857
Score = 74.7 bits (182), Expect = 5e-11
Identities = 86/300 (28%), Positives = 122/300 (40%), Gaps = 17/300 (5%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGSNTPESE-TDPILRNNTGMGKEAGE-------KLCDFDGL 773
A+ A ++P S D SG P +E T P NT E + K D
Sbjct: 603 AQHSASKSPAMSSSDSEESGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDRSSC 662
Query: 772 GTG---SSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDI 602
G+ SS+V + G+ + DVN+ A G+ RR + +
Sbjct: 663 GSNTPSSSEVETDALEKHENGEEECKEADVNQ---------AAGEANNRRCRSTSILNES 713
Query: 601 WKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQD 422
WK VSEEGRLAF+ALF ++VLPQSFSP + + KD I++ + ++L
Sbjct: 714 WKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNKDFIENEQGGDEKHENALQLDL 773
Query: 421 GAKV--TSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTT 248
+K +H + NG L EN+++ E L+ G
Sbjct: 774 NSKAWGPCSSHQDVEKNG--------LMENDNRE----------EGLLTIGL-------- 807
Query: 247 SDCKQDNQSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGARE-EKRICLK 71
KI G R G F PY RCS+EA + SR T C +G + KRI L+
Sbjct: 808 ------GYGKIKGR---RTG--FKPYKRCSVEA----IDSRVTNCCSQGEEKGPKRIRLE 852
>ref|NP_850461.1| protein CCA1 [Arabidopsis thaliana] gi|20197321|gb|AAM15022.1|
MYB-related transcription factor (CCA1); identical to
GB:U28422 supported by cDNA: gi_15293054_gb_AY050961 1_
[Arabidopsis thaliana] gi|24429606|gb|AAN61004.1|
putative MYB-related transcription factor CCA1
[Arabidopsis thaliana] gi|24762205|gb|AAN64169.1|
putative MYB-related transcription factor CCA1
[Arabidopsis thaliana] gi|330255667|gb|AEC10761.1|
protein CCA1 [Arabidopsis thaliana]
Length = 526
Score = 72.8 bits (177), Expect = 2e-10
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Frame = -3
Query: 919 AEKEAHRNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGT--------- 767
+ ++ H SK RSS S E+++ P+ E+ K DG G
Sbjct: 286 SREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPESDAK--GSDGAGDRKQVDRSSC 343
Query: 766 -----GSSDVIEACVSDRNK----GQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGH 614
SSD +EA S+R + G+ D NK +T +A RR++ +
Sbjct: 344 GSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNK--PQTSESNA------RRSRISSN 395
Query: 613 SGDIWKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDV 455
D WKSVS+EGR+AFQALF ++VLPQSF+ R + EE Q++ A D+
Sbjct: 396 ITDPWKSVSDEGRIAFQALFSREVLPQSFTYREEHREEEQQQQEQRYPMALDL 448
>ref|NP_850460.1| protein CCA1 [Arabidopsis thaliana]
gi|75319073|sp|P92973.1|CCA1_ARATH RecName: Full=Protein
CCA1; AltName: Full=MYB-related transcription factor
CCA1; AltName: Full=Protein CIRCADIAN CLOCK ASSOCIATED 1
gi|1777443|gb|AAB40525.1| CCA1 [Arabidopsis thaliana]
gi|3510263|gb|AAC33507.1| MYB-related transcription
factor (CCA1); supported by cDNA: gi:1777442
[Arabidopsis thaliana] gi|4090569|gb|AAC98813.1| CCA1
[Arabidopsis thaliana] gi|41618920|gb|AAS09981.1| MYB
transcription factor [Arabidopsis thaliana]
gi|330255666|gb|AEC10760.1| protein CCA1 [Arabidopsis
thaliana]
Length = 608
Score = 72.8 bits (177), Expect = 2e-10
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Frame = -3
Query: 919 AEKEAHRNPSKDRSSSGSNTPESETDPILRNNTGMGKEAGEKLCDFDGLGT--------- 767
+ ++ H SK RSS S E+++ P+ E+ K DG G
Sbjct: 368 SREQEHSEASKARSSLDSEDVENKSKPVCHEQPSATPESDAK--GSDGAGDRKQVDRSSC 425
Query: 766 -----GSSDVIEACVSDRNK----GQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGH 614
SSD +EA S+R + G+ D NK +T +A RR++ +
Sbjct: 426 GSNTPSSSDDVEADASERQEDGTNGEVKETNEDTNK--PQTSESNA------RRSRISSN 477
Query: 613 SGDIWKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDV 455
D WKSVS+EGR+AFQALF ++VLPQSF+ R + EE Q++ A D+
Sbjct: 478 ITDPWKSVSDEGRIAFQALFSREVLPQSFTYREEHREEEQQQQEQRYPMALDL 530
>ref|XP_002320238.2| hypothetical protein POPTR_0014s10260g [Populus trichocarpa]
gi|550323895|gb|EEE98553.2| hypothetical protein
POPTR_0014s10260g [Populus trichocarpa]
Length = 695
Score = 72.4 bits (176), Expect = 2e-10
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 20/305 (6%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGSNTPESETDPILRNNT---------GMGKEAGEKLCDFDG 776
A+ A ++P S D SG P+ T P + ++ K KL D
Sbjct: 442 AQNSASKSPKITSSDSEESGG--PKLNTGPEVIDHELTTKPHEVQDSSKTKSRKLIDRSS 499
Query: 775 LGTG---SSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGD 605
G+ SS++ + KG ++D N H + R ++ D
Sbjct: 500 CGSNTPSSSEIETDALEKAEKGTEEPKEDDAN---------HPASESSSRHSRSSSSMND 550
Query: 604 IWKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQ 425
WK VSEEGRLAFQALF ++VLPQSFSP + ++ M +++ D ++ G
Sbjct: 551 SWKEVSEEGRLAFQALFAREVLPQSFSPPHDLKSK--MHQNEDAGEKKDADEKDGDA--- 605
Query: 424 DGAKVTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTS 245
SL NS+ + EC SG + S
Sbjct: 606 ------------------------SLINLNSK---------TWECC--SGHQEGEKNALS 630
Query: 244 DCKQDNQSKI----SGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRI 80
C+ + ++ G+G ++ R F PY RCS+EAK+ R + Q ++G KR+
Sbjct: 631 RCENYGEEELLTIGLGHGKLKVRRTGFKPYKRCSLEAKESRTGTGSGQGEEKG---PKRL 687
Query: 79 CLKQE 65
L+ E
Sbjct: 688 RLEGE 692
>ref|XP_006293847.1| hypothetical protein CARUB_v10022831mg [Capsella rubella]
gi|482562555|gb|EOA26745.1| hypothetical protein
CARUB_v10022831mg [Capsella rubella]
Length = 618
Score = 72.4 bits (176), Expect = 2e-10
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Frame = -3
Query: 910 EAHRNPSKDRSS------SGSNTPESETDPILRNNT-GMGKEAGEKLCDFDGLGTG---S 761
+ H SK RSS + PE P T G AG K D G+ S
Sbjct: 385 QEHSEASKARSSLETGEIENKSKPECHEQPSATAETEGSDGAAGRKQVDRSSCGSNTSSS 444
Query: 760 SDVIEACVSDRNKGQSTVPQNDVNK--GDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVS 587
SD IEA S+R + + ++N+ + +T +A RR++ + D WKSVS
Sbjct: 445 SDDIEANASERQENDTNEEVKEMNEDTNNPQTSESNA------RRSRISSNITDPWKSVS 498
Query: 586 EEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQK 485
+EGR+AFQALF ++VLPQSF+ R + EE Q+
Sbjct: 499 DEGRIAFQALFSREVLPQSFTYREEHREEEQQQQ 532
>gb|ABK96054.1| unknown [Populus trichocarpa]
Length = 764
Score = 72.4 bits (176), Expect = 2e-10
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 20/305 (6%)
Frame = -3
Query: 919 AEKEAHRNP---SKDRSSSGSNTPESETDPILRNNT---------GMGKEAGEKLCDFDG 776
A+ A ++P S D SG P+ T P + ++ K KL D
Sbjct: 511 AQNSASKSPKITSSDSEESGG--PKLNTGPEVIDHELTTKPHEVQDSSKTKSRKLIDRSS 568
Query: 775 LGTG---SSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGD 605
G+ SS++ + KG ++D N H + R ++ D
Sbjct: 569 CGSNTPSSSEIETDALEKAEKGTEEPKEDDAN---------HPASESSSRHSRSSSSMND 619
Query: 604 IWKSVSEEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQ 425
WK VSEEGRLAFQALF ++VLPQSFSP + ++ M +++ D ++ G
Sbjct: 620 SWKEVSEEGRLAFQALFAREVLPQSFSPPHDLKSK--MHQNEDAGEKKDADEKDGDA--- 674
Query: 424 DGAKVTSINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTS 245
SL NS+ + EC SG + S
Sbjct: 675 ------------------------SLINLNSK---------TWECC--SGHQEGEKNALS 699
Query: 244 DCKQDNQSKI----SGNGNMRPGR-AFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRI 80
C+ + ++ G+G ++ R F PY RCS+EAK+ R + Q ++G KR+
Sbjct: 700 RCENYGEEELLTIGLGHGKLKVRRTGFKPYKRCSLEAKESRTGTGSGQGEEKG---PKRL 756
Query: 79 CLKQE 65
L+ E
Sbjct: 757 RLEGE 761
>gb|EOX95556.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
protein isoform 5 [Theobroma cacao]
Length = 707
Score = 71.2 bits (173), Expect = 5e-10
Identities = 78/294 (26%), Positives = 118/294 (40%), Gaps = 6/294 (2%)
Frame = -3
Query: 928 KSPAEKEAHRNPSKD-RSSSGSNTPESE-----TDPILRNNTGMGKEAGEKLCDFDGLGT 767
KSP + D + ++G + E T+P N T K+ C G T
Sbjct: 459 KSPTSSSSDSEACGDAKVNTGVKAADDEKAAAVTEPQDANKTKNRKQVDRSSC---GSNT 515
Query: 766 GSSDVIEACVSDRNKGQSTVPQNDVNKGDARTIRCHAHGDVIGRRAKPGGHSGDIWKSVS 587
SS +E V ++ + + D DA H + RR + + D WK VS
Sbjct: 516 PSSSEVETDVLEKYEKD----KEDAKGADAN----HPQVECCNRRGRSCSNPSDSWKEVS 567
Query: 586 EEGRLAFQALFDQDVLPQSFSPRNKFNAEEPMQKDDIQSSASDVCQRSGGIELQDGAKVT 407
E GRLAFQALF ++VLPQSFSP + + QKD ++ + ++ G
Sbjct: 568 EGGRLAFQALFSREVLPQSFSPPHD-GKNKGQQKDKVEDDKQNSDEKDGAT--------- 617
Query: 406 SINHDFIGSNGMWREPTFSLYENNSQVPEATASDCSLECLIDSGRNSPMNDTTSDCKQDN 227
S + NSQ T CS ++ S D +
Sbjct: 618 ------------------SALDLNSQ----TVRSCSYRQGVEKNGLSRGEDIVGEGLLTI 655
Query: 226 QSKISGNGNMRPGRAFVPYTRCSIEAKKDRLHSRPTQNCQEGAREEKRICLKQE 65
+ + R G F PY RCS+EAK++++ + +Q ++G KRI L+ E
Sbjct: 656 GLEHAKLKARRTG--FKPYKRCSVEAKENKVMNAGSQGEEKG---PKRIRLEGE 704