BLASTX nr result

ID: Ephedra25_contig00008657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00008657
         (447 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18035.1| unknown [Picea sitchensis]                             155   4e-36
ref|XP_002968188.1| hypothetical protein SELMODRAFT_440352 [Sela...    75   7e-12
ref|XP_001781331.1| predicted protein [Physcomitrella patens] gi...    74   2e-11
ref|XP_002976192.1| hypothetical protein SELMODRAFT_443104 [Sela...    72   1e-10

>gb|ABR18035.1| unknown [Picea sitchensis]
          Length = 466

 Score =  155 bits (393), Expect = 4e-36
 Identities = 72/147 (48%), Positives = 106/147 (72%)
 Frame = +2

Query: 5   SLTMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLIS 184
           +L  PL   +KE+ LFDLGE ++LWS+AV+KG  + +  AFK   KK+  ++ +LE  + 
Sbjct: 52  ALQFPLSLRDKEEALFDLGEAFLLWSSAVRKGPCLGNHSAFKGNIKKHHAIQLQLEASLY 111

Query: 185 SADLCRKSTEAYKMAFSIDGGHLKREALINCANALCDWAEILCDIPLDIGGGITPATGLY 364
           +A+LCR+S E+Y+  FS++GG LK+E+ INCANALCDW EI+ +IP + GGG   A  LY
Sbjct: 112 AANLCRQSVESYRKIFSMEGGELKQESRINCANALCDWGEIVSEIPTNKGGGTGLAADLY 171

Query: 365 SEAMRMYSKAKEMEPADVEVLTNMGDC 445
           ++A  +Y++A   +P DVE+LTN+GDC
Sbjct: 172 AQADNIYTEALVSDPVDVELLTNLGDC 198


>ref|XP_002968188.1| hypothetical protein SELMODRAFT_440352 [Selaginella moellendorffii]
            gi|300163832|gb|EFJ30442.1| hypothetical protein
            SELMODRAFT_440352 [Selaginella moellendorffii]
          Length = 1935

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
 Frame = +2

Query: 32   EKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTA--KKNPVVESKLETLISSADLCRK 205
            ++++ LFDLG+   LW+ ++   A      A  +T   KK      KLE    +A L  K
Sbjct: 1400 DRDECLFDLGDTCFLWAKSI---ATAVPSLATPLTGDTKKARAEVLKLEAFARAAPLFTK 1456

Query: 206  STEAYKMAFSIDGGHLKREALINCANALCDWAEILCDIPLDIGGGITPATGLYSEAMRMY 385
            S E +     I+   LK EAL N  + LC+ AE+L ++P   GGG+  A  L S+A   Y
Sbjct: 1457 SFEIFD---KIELSELKAEALTNSGSVLCELAEVLVELPETQGGGLGVAMKLCSDAYERY 1513

Query: 386  SKAKEMEPADVEVLTNMGDC 445
            S A    P D++V  NM DC
Sbjct: 1514 SAALSASPDDLDVHANMADC 1533


>ref|XP_001781331.1| predicted protein [Physcomitrella patens]
           gi|162667224|gb|EDQ53859.1| predicted protein
           [Physcomitrella patens]
          Length = 221

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
 Frame = +2

Query: 5   SLTMPLPPSEKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTAKKNPVVESKLETLIS 184
           +L+M L    +E+ LFDLGE ++  + A++          F+   KK   +E + +  + 
Sbjct: 59  ALSMRLSLPVQEEALFDLGETFLEMAGALQTRGLHLAGSPFRNEKKKAQALEIQSQASVD 118

Query: 185 SADLCRKSTEAYKMAFSIDG-GHLKREALINCANALCDWAEILCDIPLDIGGGITPATGL 361
           ++   R+S E Y+   +++G G LK+EAL+N  NALC+WA +    P + GGG   A  L
Sbjct: 119 ASSATRQSFEMYERVCALEGAGELKQEALVNSGNALCEWASLATSTPENKGGGSVIAAEL 178

Query: 362 YSEA 373
           Y +A
Sbjct: 179 YKQA 182


>ref|XP_002976192.1| hypothetical protein SELMODRAFT_443104 [Selaginella moellendorffii]
            gi|300156468|gb|EFJ23097.1| hypothetical protein
            SELMODRAFT_443104 [Selaginella moellendorffii]
          Length = 1941

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
 Frame = +2

Query: 32   EKEDVLFDLGEVYMLWSNAVKKGAFIADLRAFKVTA--KKNPVVESKLETLISSADLCRK 205
            ++++ LFDL +   LW+ ++   A      A  +T   KK      KLE    +A L  K
Sbjct: 1378 DRDECLFDLADTCFLWAKSI---ATAVPSLATPLTGDTKKARAEVLKLEAFARAAPLFTK 1434

Query: 206  STEAYKMAFSIDGGHLKREALINCANALCDWAEILCDIPLDIGGGITPATGLYSEAMRMY 385
            S E +     I+   LK EAL N  + LC+  E+L ++P   GGG+  A  L S+A   Y
Sbjct: 1435 SFEIFD---KIELSELKAEALTNSGSVLCELVEVLVELPETQGGGLGVAMKLCSDAYERY 1491

Query: 386  SKAKEMEPADVEVLTNMGDC 445
            S A    P D++V  NM DC
Sbjct: 1492 SAALSASPDDLDVHANMADC 1511


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