BLASTX nr result

ID: Ephedra25_contig00008135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00008135
         (478 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17519.1| unknown [Picea sitchensis]                              45   2e-06

>gb|ABR17519.1| unknown [Picea sitchensis]
          Length = 512

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = -3

Query: 230 IASSVDTAKDLFKTQNHVFPGRCMLECSKVLSFHLTDMTLQQPGPQWKLLWKISMLYVFS 51
           + SS   AK++ KT  HVF GR + + ++ LS   +   L Q G +W+ L +IS   +FS
Sbjct: 82  VVSSPSMAKEVLKTHGHVFAGRIVTQAARSLSHDKSSFLLCQYGSRWRTLRRISNTELFS 141

Query: 50  HAEIHSLHN 24
              + +L +
Sbjct: 142 VKRLDALQD 150



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -1

Query: 412 KVKDKASARSERMASNWQFV----ELGNKPDKSLWAFAMKHGAVMSLTL 278
           K K K   R       W  V    +LG KP +SL+  A K+G +MSL+L
Sbjct: 27  KKKKKTYCRLPPGPQGWPIVGNLFQLGKKPHESLFRLATKYGPLMSLSL 75


Top