BLASTX nr result

ID: Ephedra25_contig00008058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00008058
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26221.1| unknown [Picea sitchensis]                             137   2e-30
gb|EOY12680.1| RNA-binding family protein [Theobroma cacao]           123   3e-26
gb|AFK44512.1| unknown [Medicago truncatula]                          120   1e-25
ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein ...   120   2e-25
ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica]       120   2e-25
ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein ...   120   2e-25
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S...   119   3e-25
ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium dist...   119   4e-25
ref|NP_001150207.1| LOC100283837 [Zea mays] gi|195621336|gb|ACG3...   119   5e-25
gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlise...   118   9e-25
gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus...   117   2e-24
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g...   117   2e-24
ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik...   117   2e-24
ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   117   2e-24
gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indi...   117   2e-24
ref|XP_002530915.1| RNA binding protein, putative [Ricinus commu...   116   3e-24
dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgar...   115   6e-24
ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein ...   114   1e-23
ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum...   114   1e-23
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...   114   1e-23

>gb|ABK26221.1| unknown [Picea sitchensis]
          Length = 151

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -1

Query: 497 PAQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEA 318
           PA P PKLF+SGLSKRTT+E LR AF KFG V++ RVV DK  G SK F FV YATQEEA
Sbjct: 42  PADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEA 101

Query: 317 DKGKEGMDAKFLDGWVIFAEYAKPKPSKYVD 225
           DKGKEGMD KFLDGWVIFA+YA+P+P +  D
Sbjct: 102 DKGKEGMDGKFLDGWVIFADYARPRPPRTYD 132


>gb|EOY12680.1| RNA-binding family protein [Theobroma cacao]
          Length = 156

 Score =  123 bits (308), Expect = 3e-26
 Identities = 59/87 (67%), Positives = 69/87 (79%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P   LF+SGL+KRTT E LR AF +FG VVD RVV D+ +G SK FGFV YAT EEA+
Sbjct: 52  APPSTNLFVSGLNKRTTMEKLREAFSQFGQVVDARVVTDRVSGYSKGFGFVRYATLEEAE 111

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKPSK 234
           KG+EGMD KFLDGWVIFAEYA+P+P +
Sbjct: 112 KGREGMDGKFLDGWVIFAEYARPRPER 138


>gb|AFK44512.1| unknown [Medicago truncatula]
          Length = 144

 Score =  120 bits (302), Expect = 1e-25
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P   LF+SGLSKRTT ETLR AF+KFG VV  RVV D+ +G SK FGFV YAT E+A 
Sbjct: 47  AEPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAA 106

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFL+GWVIFAEYA+P+P
Sbjct: 107 KGIEGMDGKFLEGWVIFAEYARPRP 131


>ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           [Oryza brachyantha]
          Length = 141

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT + LR AF KFG V+  RVV D+ TG SK FGFV YAT E+A 
Sbjct: 32  ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVLHARVVTDRVTGFSKGFGFVRYATVEDAA 91

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKPSKYVDVLGTISDKNQGMSAS 180
           KG EGMD KFLDGWVIFAEYA+P+P +    + +   ++ G  +S
Sbjct: 92  KGIEGMDGKFLDGWVIFAEYARPRPPQQQPEMNSQPQQSWGPPSS 136


>ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica]
          Length = 140

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/85 (70%), Positives = 65/85 (76%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT E LR AF  FG VV  RVV D+ +G SK FGFV YAT E+A 
Sbjct: 31  ADPSPNLFVSGLSKRTTTEGLREAFAAFGEVVHARVVTDRVSGFSKGFGFVRYATVEDAT 90

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYAKP+P
Sbjct: 91  KGIEGMDGKFLDGWVIFAEYAKPRP 115


>ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           [Glycine max]
          Length = 145

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/85 (70%), Positives = 66/85 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P P LF+SGLSKRTT E LR  F KFG VV  RVV D+ +G SK FGFV YAT EEA 
Sbjct: 45  AEPNPNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAA 104

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYA+P+P
Sbjct: 105 KGIEGMDGKFLDGWVIFAEYARPRP 129


>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
           gi|241941370|gb|EES14515.1| hypothetical protein
           SORBIDRAFT_07g002960 [Sorghum bicolor]
          Length = 140

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/84 (71%), Positives = 65/84 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT E LR AF KFG VV  RVV D+ +G SK FGFV YAT EEA 
Sbjct: 31  ADPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEAT 90

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPK 243
           KG EGMD KFLDGWVIFAEYA+P+
Sbjct: 91  KGIEGMDGKFLDGWVIFAEYARPR 114


>ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
          Length = 153

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/85 (68%), Positives = 66/85 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT + LR AF KFG V+  RVV D+ TG SK FGFV YA+ E+A 
Sbjct: 44  ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDAS 103

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYA+P+P
Sbjct: 104 KGIEGMDGKFLDGWVIFAEYARPRP 128


>ref|NP_001150207.1| LOC100283837 [Zea mays] gi|195621336|gb|ACG32498.1| nucleolin [Zea
           mays] gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
           gi|223948323|gb|ACN28245.1| unknown [Zea mays]
           gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
          Length = 140

 Score =  119 bits (297), Expect = 5e-25
 Identities = 59/85 (69%), Positives = 65/85 (76%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT E LR AF +FG V+  RVV D+ +G SK FGFV YAT EEA 
Sbjct: 31  ADPSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAA 90

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EG D KFLDGWVIFAEYAKP+P
Sbjct: 91  KGIEGKDGKFLDGWVIFAEYAKPRP 115


>gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlisea aurea]
          Length = 151

 Score =  118 bits (295), Expect = 9e-25
 Identities = 57/86 (66%), Positives = 68/86 (79%)
 Frame = -1

Query: 497 PAQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEA 318
           PA+P   LF+SGLSKRTT E LR AF KFG VV+ RVV D+ +G SK FGFV YAT E+A
Sbjct: 48  PAEPSTNLFVSGLSKRTTTEGLRDAFAKFGEVVNARVVTDRVSGHSKGFGFVKYATLEDA 107

Query: 317 DKGKEGMDAKFLDGWVIFAEYAKPKP 240
           + G +GMD +FLDGWVIFAEYA+P+P
Sbjct: 108 ESGIKGMDGQFLDGWVIFAEYARPRP 133


>gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
          Length = 144

 Score =  117 bits (293), Expect = 2e-24
 Identities = 59/85 (69%), Positives = 65/85 (76%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P   LF+SGLSKRTT E LR  F KFG VV  RVV D+ +G SK FGFV YAT EEA 
Sbjct: 45  AEPNNNLFVSGLSKRTTTEKLREEFSKFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAA 104

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYA+P+P
Sbjct: 105 KGIEGMDGKFLDGWVIFAEYARPRP 129


>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
           gi|38636774|dbj|BAD03017.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
           sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639884|gb|EEE68016.1| hypothetical protein
           OsJ_25986 [Oryza sativa Japonica Group]
          Length = 141

 Score =  117 bits (293), Expect = 2e-24
 Identities = 58/84 (69%), Positives = 65/84 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LFISGLSKRTT + L+ AF KFG V+  RVV D+ TG SK FGFV YAT E+A 
Sbjct: 32  ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAA 91

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPK 243
           KG EGMD KFLDGWVIFAEYA+P+
Sbjct: 92  KGIEGMDGKFLDGWVIFAEYARPR 115


>ref|XP_004505422.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cicer arietinum]
          Length = 142

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/85 (68%), Positives = 66/85 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P   LF+SGLSKRTT E LR  F+KFG VV  RVV D+ +G SK FGFV YAT E+A 
Sbjct: 42  AEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAA 101

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYA+P+P
Sbjct: 102 KGIEGMDGKFLDGWVIFAEYARPRP 126


>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 174

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/85 (68%), Positives = 64/85 (75%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P   LF+SGLSKRTT E L  AF KFG V   RVV D+ TG SK FGFV YAT E+A 
Sbjct: 75  AEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAA 134

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD KFLDGWVIFAEYA+P+P
Sbjct: 135 KGIEGMDGKFLDGWVIFAEYARPRP 159


>gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
          Length = 141

 Score =  117 bits (292), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 65/84 (77%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LFISGLSKRTT + L+ AF KFG V+  RVV D+ TG SK FGF+ YAT E+A 
Sbjct: 32  ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAA 91

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPK 243
           KG EGMD KFLDGWVIFAEYA+P+
Sbjct: 92  KGIEGMDGKFLDGWVIFAEYARPR 115


>ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
           gi|223529509|gb|EEF31464.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 354

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/101 (58%), Positives = 71/101 (70%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A+P   LF+SGLSKRTT E L+ AF KFG VV  RVV D+ +G SK FGFV Y + E+A+
Sbjct: 48  AEPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAE 107

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKPSKYVDVLGTISDKNQG 192
           KG EGMD KFLDGWVIFAEYA+P+P    +  G+    N G
Sbjct: 108 KGIEGMDGKFLDGWVIFAEYARPRPPLPGNNTGSAYGNNTG 148


>dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 153

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/85 (65%), Positives = 64/85 (75%)
 Frame = -1

Query: 494 AQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEAD 315
           A P P LF+SGLSKRTT + LR AF KFG V   RV+ D+ TG SK FGFV Y T E+A 
Sbjct: 44  ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAA 103

Query: 314 KGKEGMDAKFLDGWVIFAEYAKPKP 240
           KG EGMD +FLDGWVIFAEYA+P+P
Sbjct: 104 KGIEGMDGEFLDGWVIFAEYARPRP 128


>ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
           [Solanum tuberosum]
          Length = 157

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = -1

Query: 497 PAQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEA 318
           PA+P   LF+SGLSKRTT E LR AF K G VV  RVV D+ +G SK FGFV YAT E+A
Sbjct: 47  PAEPSTNLFVSGLSKRTTSEGLREAFVKHGEVVHARVVTDRVSGYSKGFGFVRYATLEDA 106

Query: 317 DKGKEGMDAKFLDGWVIFAEYAKPKP 240
           + G +GMD +FLDGWVIFAEYA+P+P
Sbjct: 107 EAGIKGMDGQFLDGWVIFAEYARPRP 132


>ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
          Length = 151

 Score =  114 bits (286), Expect = 1e-23
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = -1

Query: 497 PAQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEA 318
           PA+P   LF+SGLSKRTT E LR AF K G VV  RVV D+ +G SK FGFV YAT E+A
Sbjct: 41  PAEPSTNLFVSGLSKRTTSEGLREAFVKHGEVVHARVVTDRVSGYSKGFGFVRYATLEDA 100

Query: 317 DKGKEGMDAKFLDGWVIFAEYAKPKP 240
           + G +GMD +FLDGWVIFAEYA+P+P
Sbjct: 101 EAGIKGMDGQFLDGWVIFAEYARPRP 126


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = -1

Query: 497 PAQPCPKLFISGLSKRTTEETLRAAFEKFGTVVDVRVVLDKNTGASKCFGFVTYATQEEA 318
           PA+P   LF+SGLSKRTT E L  AF KFG VV+ RVV D+ +G SK FGFV Y + E+A
Sbjct: 36  PAEPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDA 95

Query: 317 DKGKEGMDAKFLDGWVIFAEYAKPKP 240
            +G +GMD KFLDGWVIFAEYA+P+P
Sbjct: 96  AEGIKGMDGKFLDGWVIFAEYARPRP 121


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