BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007270
         (1928 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357891.1| PREDICTED: pentatricopeptide repeat-containi...   513   e-142
ref|XP_004243629.1| PREDICTED: pentatricopeptide repeat-containi...   513   e-142
ref|XP_006468968.1| PREDICTED: pentatricopeptide repeat-containi...   504   e-140
ref|XP_006446843.1| hypothetical protein CICLE_v10014674mg [Citr...   504   e-140
ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containi...   503   e-139
gb|EOX93050.1| Tetratricopeptide repeat-like superfamily protein...   496   e-137
gb|EMJ18179.1| hypothetical protein PRUPE_ppa002772mg [Prunus pe...   495   e-137
ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containi...   494   e-137
ref|XP_004303905.1| PREDICTED: pentatricopeptide repeat-containi...   493   e-136
ref|XP_006402731.1| hypothetical protein EUTSA_v10005856mg [Eutr...   490   e-135
ref|XP_002878256.1| pentatricopeptide repeat-containing protein ...   490   e-135
ref|XP_006836335.1| hypothetical protein AMTR_s00092p00083700 [A...   486   e-134
ref|NP_974457.1| pentatricopeptide repeat-containing protein [Ar...   484   e-134
ref|NP_191463.2| pentatricopeptide repeat-containing protein [Ar...   484   e-134
emb|CAB86932.1| putative protein [Arabidopsis thaliana] gi|24030...   484   e-134
ref|XP_002298285.1| hypothetical protein POPTR_0001s22750g [Popu...   484   e-134
ref|XP_006290805.1| hypothetical protein CARUB_v10016912mg [Caps...   483   e-133
ref|XP_002532598.1| pentatricopeptide repeat-containing protein,...   483   e-133
ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [S...   481   e-133
ref|XP_004972659.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-133

>ref|XP_006357891.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Solanum tuberosum]
          Length = 576

 Score =  513 bits (1320), Expect = e-142
 Identities = 247/426 (57%), Positives = 325/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WRKMM EIE  GSAV+V+   R     LP+ L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 76   WRKMMNEIEEAGSAVSVLRTQRDKNQALPKNLVLGSLVRFKQLKKWNLVSEILEWLRTQH 135

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGKQG++ KAE+ L  M +     +V ++TAL+EAYGK G  +KA
Sbjct: 136  WWDFNEMDFLMLITAYGKQGDFSKAERILGYMNKKGYPANVISHTALMEAYGKGGQYAKA 195

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQ+SGP PS +TYQ ++KI V+ DKF+EA+E+F +++D + P +KPD++MFH+M
Sbjct: 196  EAIFRRMQTSGPEPSAITYQIILKIFVEGDKFNEAQEVFEALMDMDAPPLKPDQKMFHMM 255

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK GK ++A+ L + M  RGIPQ TVT+NSLM+ E   K    +++++ R+GLRPD
Sbjct: 256  IYMYKKAGKYEKARHLFSLMAERGIPQNTVTYNSLMSFETNYKEVANIYDQMQRAGLRPD 315

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LIS Y KAR E+ A  +F+EM+ AGV+PT  ++N+LLDA+A SG+VE+A+ VFK
Sbjct: 316  VVSYALLISAYGKARREEEALAVFEEMLDAGVRPTQKSYNILLDAFAISGMVEQARTVFK 375

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++RC PDLCSYTTMLSAY+NASDMEGAEKFF RIK DG  PN V YG LIKGY K +
Sbjct: 376  SMRRDRCSPDLCSYTTMLSAYINASDMEGAEKFFRRIKQDGLEPNVVTYGTLIKGYAKTN 435

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            +LEKM++KYE+MR  G+K N TI+TT+MDA+GRN DF SA+ WF EM SSG  PDQKAKN
Sbjct: 436  DLEKMMEKYEDMRVHGIKANQTIFTTIMDAYGRNKDFGSAVAWFNEMASSGVSPDQKAKN 495

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 496  ILLSLA 501



 Score = 88.2 bits (217), Expect = 1e-14
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
 Frame = +1

Query: 550  NRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIF 729
            N + YN LM     + NY++     D M+ A +  DV +Y  LI AYGK+    +AL++F
Sbjct: 283  NTVTYNSLM---SFETNYKEVANIYDQMQRAGLRPDVVSYALLISAYGKARREEEALAVF 339

Query: 730  KRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMY 909
            + M  +G  P+  +Y  ++         ++A  +F S+    R    PD   +  M+  Y
Sbjct: 340  EEMLDAGVRPTQKSYNILLDAFAISGMVEQARTVFKSM---RRDRCSPDLCSYTTMLSAY 396

Query: 910  KKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKRDELFNEVYRS----GLRPDV 1077
                  + A++    +   G+    VT+ +L+ G       E   E Y      G++ + 
Sbjct: 397  INASDMEGAEKFFRRIKQDGLEPNVVTYGTLIKGYAKTNDLEKMMEKYEDMRVHGIKANQ 456

Query: 1078 VTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
              +T ++  Y + ++  +A   F+EM ++GV P   A N+LL     S    EAK +
Sbjct: 457  TIFTTIMDAYGRNKDFGSAVAWFNEMASSGVSPDQKAKNILLSLAKTSEEQMEAKQI 513


>ref|XP_004243629.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Solanum lycopersicum]
          Length = 580

 Score =  513 bits (1320), Expect = e-142
 Identities = 247/426 (57%), Positives = 326/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WRKMM EIE  GSAV+V+   R     LP+ L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 76   WRKMMNEIEEAGSAVSVLRTQRDKNQALPKNLVLGSLVRFKQLKKWNLVSEILEWLRTQH 135

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGKQG++ KAE+ L  M +     +V ++TAL+EAYGK G  +KA
Sbjct: 136  WWDFNEMDFLMLITAYGKQGDFSKAERILGYMNKKGYPANVISHTALMEAYGKGGQYAKA 195

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQ+SGP PS +TYQ ++KI V+ DKF+EA+++F +++D + P +KPD++MFH+M
Sbjct: 196  EAIFRRMQTSGPEPSAITYQIILKIFVEGDKFNEAQDVFEALMDMDAPPLKPDQKMFHMM 255

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK GK ++A+ L + M  RGIPQ TVT+NSLM+ E   K    +++++ R+GL+PD
Sbjct: 256  IYMYKKAGKYEKARHLFSLMTERGIPQNTVTYNSLMSFETNYKEVANIYDQMQRAGLQPD 315

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LIS Y KAR E+ A  +F+EM+ AGV+PT  ++N+LLDA+A SG+VE+A+ VFK
Sbjct: 316  VVSYALLISAYGKARREEEALAVFEEMLDAGVRPTQKSYNILLDAFAISGMVEQARTVFK 375

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++RC PDLCSYTTMLSAY+NASDMEGAEKFF RIK DG  PN V YGALIKGY K +
Sbjct: 376  SMRRDRCSPDLCSYTTMLSAYINASDMEGAEKFFRRIKQDGLEPNVVTYGALIKGYAKTN 435

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            +LEKM++KYEEMR  G+K N TI+TT+MDA+GRN DF SA+ WF EM SSG  PDQKAKN
Sbjct: 436  DLEKMMEKYEEMRVHGIKTNQTIFTTIMDAYGRNKDFGSAVAWFNEMASSGVSPDQKAKN 495

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 496  ILLSLA 501



 Score = 89.0 bits (219), Expect = 7e-15
 Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 4/237 (1%)
 Frame = +1

Query: 550  NRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIF 729
            N + YN LM     + NY++     D M+ A +  DV +Y  LI AYGK+    +AL++F
Sbjct: 283  NTVTYNSLM---SFETNYKEVANIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVF 339

Query: 730  KRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMY 909
            + M  +G  P+  +Y  ++         ++A  +F S+    R    PD   +  M+  Y
Sbjct: 340  EEMLDAGVRPTQKSYNILLDAFAISGMVEQARTVFKSM---RRDRCSPDLCSYTTMLSAY 396

Query: 910  KKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGI----KRDELFNEVYRSGLRPDV 1077
                  + A++    +   G+    VT+ +L+ G        K  E + E+   G++ + 
Sbjct: 397  INASDMEGAEKFFRRIKQDGLEPNVVTYGALIKGYAKTNDLEKMMEKYEEMRVHGIKTNQ 456

Query: 1078 VTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
              +T ++  Y + ++  +A   F+EM ++GV P   A N+LL     S    EAK +
Sbjct: 457  TIFTTIMDAYGRNKDFGSAVAWFNEMASSGVSPDQKAKNILLSLAKTSEEQMEAKQI 513


>ref|XP_006468968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Citrus sinensis]
          Length = 599

 Score =  504 bits (1297), Expect = e-140
 Identities = 237/426 (55%), Positives = 327/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++M +IE  GSAV V+ + R    PLP++L+LG L R K  K W  VSEV+EWL+ Q 
Sbjct: 73   WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 132

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGKQG++ KAE+ L  M +      V ++TAL+EAYG+ G  + A
Sbjct: 133  WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYNNA 192

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS +TYQ ++K+ V+ +KF EAEE+F ++LD+E+  +KPD++MFH+M
Sbjct: 193  EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 252

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK G  ++A+++   M  RG+ Q TVT+NSLM+ E   K   ++++++ R+GL+PD
Sbjct: 253  IYMYKKAGGYEKARKIFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 312

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LI+ Y KAR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+V++A+ VFK
Sbjct: 313  VVSYALLINAYGKARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++RC PD+CSYTTMLSAYVNASDMEGAEKFF R+K DGFVPN + YG LIKGY K +
Sbjct: 373  CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM++ Y++MR  G+KPN TI+TT+MDA+G+N DF SA++W+KEM S G  PDQKAKN
Sbjct: 433  NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 493  ILLSLA 498



 Score = 99.0 bits (245), Expect = 7e-18
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 4/267 (1%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            +++++  Y K G YEKA +    M E  V      Y +L+         SK   I+ +MQ
Sbjct: 249  FHMMIYMYKKAGGYEKARKIFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 305

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P VV+Y  +I       + +EA  +F  +LD     V+P  + +++++  +   G
Sbjct: 306  RAGLQPDVVSYALLINAYGKARREEEALSVFEEMLD---AGVRPTHKAYNILLDAFAISG 362

Query: 922  KNDEAQRLLNEM----IARGIPQCTVTFNSLMTGEQGIKRDELFNEVYRSGLRPDVVTYT 1089
              D+A+ +   M     +  I   T   ++ +        ++ F  + + G  P+V+TY 
Sbjct: 363  MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFKRMRKE 1269
             LI  YAK  N +   EI+D+M   G+KP    F  ++DAY ++   + A V +K M   
Sbjct: 423  TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482

Query: 1270 RCFPDLCSYTTMLSAYVNASDMEGAEK 1350
               PD  +   +LS    A +   A +
Sbjct: 483  GFPPDQKAKNILLSLAKTADERNEANE 509


>ref|XP_006446843.1| hypothetical protein CICLE_v10014674mg [Citrus clementina]
            gi|557549454|gb|ESR60083.1| hypothetical protein
            CICLE_v10014674mg [Citrus clementina]
          Length = 597

 Score =  504 bits (1297), Expect = e-140
 Identities = 238/426 (55%), Positives = 326/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++M +IE  GSAV V+ + R    PLP++L+LG L R K  K W  VSEV+EWL+ Q 
Sbjct: 73   WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 132

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGKQG++ KAE+ L  M +      V ++TAL+EAYG+ G    A
Sbjct: 133  WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 192

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS +TYQ ++K+ V+ +KF EAEE+F ++LD+E+  +KPD++MFH+M
Sbjct: 193  EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 252

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK G  ++A++L   M  RG+ Q TVT+NSLM+ E   K   ++++++ R+GL+PD
Sbjct: 253  IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 312

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LI+ Y KAR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+V++A+ VFK
Sbjct: 313  VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 372

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++RC PD+CSYTTMLSAYVNASDMEGAEKFF R+K DGFVPN + YG LIKGY K +
Sbjct: 373  CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 432

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM++ Y++MR  G+KPN TI+TT+MDA+G+N DF SA++W+KEM S G  PDQKAKN
Sbjct: 433  NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 492

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 493  ILLSLA 498



 Score = 98.6 bits (244), Expect = 9e-18
 Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 4/267 (1%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            +++++  Y K G YEKA +    M E  V      Y +L+         SK   I+ +MQ
Sbjct: 249  FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 305

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P VV+Y  +I       + +EA  +F  +LD     V+P  + +++++  +   G
Sbjct: 306  RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD---AGVRPTHKAYNILLDAFAISG 362

Query: 922  KNDEAQRLLNEM----IARGIPQCTVTFNSLMTGEQGIKRDELFNEVYRSGLRPDVVTYT 1089
              D+A+ +   M     +  I   T   ++ +        ++ F  + + G  P+V+TY 
Sbjct: 363  MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 422

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFKRMRKE 1269
             LI  YAK  N +   EI+D+M   G+KP    F  ++DAY ++   + A V +K M   
Sbjct: 423  TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 482

Query: 1270 RCFPDLCSYTTMLSAYVNASDMEGAEK 1350
               PD  +   +LS    A +   A +
Sbjct: 483  GFPPDQKAKNILLSLAKTADERNEANE 509


>ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Cucumis sativus]
          Length = 580

 Score =  503 bits (1294), Expect = e-139
 Identities = 236/426 (55%), Positives = 327/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++M EIE  GSAV+V+ + RI    +P++L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 73   WRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWLRTQS 132

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WWNF+ +D+ +L+ AYGK G++ +AE+ L+ M +     +V ++TAL+EAYG+    + A
Sbjct: 133  WWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNA 192

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQS GP PS +TYQ M+K  V+  KF EAEE+F S+L+ E+P +KPD++MFH++
Sbjct: 193  EAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMI 252

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+M+KK G  ++A+++  EM ARG+PQ TVT+NSLM+ E   K   ++++++ R+GL+PD
Sbjct: 253  IYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 312

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LIS Y KAR E+ A  +F+EM+ AG++PTH A+N+LLDA+A SG+VE+AK+VFK
Sbjct: 313  VVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFK 372

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             M+++RC PD+CSYTTMLSAYVNASDMEGAE FF R+K DGF PN V YG LIKGY K +
Sbjct: 373  SMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYGTLIKGYAKIN 432

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM+K+YEEM+  G++ N TI TT+MDA+G+N DF SA+IWF E+ S G +PDQKAKN
Sbjct: 433  NLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESCGLRPDQKAKN 492

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 493  ILLSLA 498



 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 4/267 (1%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            +++++  + K GNYEKA +    M    V      Y +L+         SK   I+ +MQ
Sbjct: 249  FHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSK---IYDQMQ 305

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P VV+Y  +I       + +EA  +F  +LD     ++P  + +++++  +   G
Sbjct: 306  RAGLQPDVVSYALLISAYGKARREEEALAVFEEMLD---AGIRPTHKAYNILLDAFAISG 362

Query: 922  KNDEAQRLLNEM----IARGIPQCTVTFNSLMTGEQGIKRDELFNEVYRSGLRPDVVTYT 1089
              ++A+ +   M     +  I   T   ++ +        +  F  + + G RP+VVTY 
Sbjct: 363  MVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVTYG 422

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFKRMRKE 1269
             LI  YAK  N +   + ++EM   G++        ++DAY ++     A + F  +   
Sbjct: 423  TLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIESC 482

Query: 1270 RCFPDLCSYTTMLSAYVNASDMEGAEK 1350
               PD  +   +LS    A +++ A +
Sbjct: 483  GLRPDQKAKNILLSLAKTAEELDEANQ 509



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 5/201 (2%)
 Frame = +1

Query: 556  LDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKR 735
            + Y LL+ AYGK    E+A    + M +A +     AY  L++A+  SG   +A  +FK 
Sbjct: 314  VSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKS 373

Query: 736  MQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKK 915
            M+     P + +Y TM+   V+    + AE  F  +  D     +P+   +  +I  Y K
Sbjct: 374  MKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQD---GFRPNVVTYGTLIKGYAK 430

Query: 916  IGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKRDE-----LFNEVYRSGLRPDVV 1080
            I   ++  +   EM   GI        ++M    G  +D       FNE+   GLRPD  
Sbjct: 431  INNLEKMIKRYEEMKVNGIRVNQTILTTIMDA-YGKNKDFGSAVIWFNEIESCGLRPDQK 489

Query: 1081 TYTQLISRYAKARNEQAAQEI 1143
                L+S    A     A ++
Sbjct: 490  AKNILLSLAKTAEELDEANQL 510


>gb|EOX93050.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 582

 Score =  496 bits (1276), Expect = e-137
 Identities = 236/426 (55%), Positives = 323/426 (75%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++MK+IE  GSA TV+   R  +  LPR+L+LG L RFK  K W+YVSE++EWL+ Q 
Sbjct: 110  WRRLMKDIEDTGSASTVLRRQRTNEQYLPRDLVLGTLVRFKQMKKWQYVSEILEWLRAQS 169

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+F+ +D+ +L+ AYGKQG++ KAE+ +  M +      V ++TAL+EAYG+ G  + A
Sbjct: 170  WWDFSEMDFIMLITAYGKQGDFNKAERIMSFMNKKGYAPSVVSHTALMEAYGRGGRYNNA 229

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS +TYQ ++KILV+  KF EAEE+F +VLD E+  +KPD++MFH+M
Sbjct: 230  EAIFRRMQSSGPEPSALTYQIILKILVEGKKFKEAEEVFETVLDKEKSPLKPDQKMFHMM 289

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK G  ++A++L   M  RG+ Q TVT+NSLMT E   K   ++++++ R+GLRPD
Sbjct: 290  IYMYKKAGSYEKARKLFALMAERGVKQSTVTYNSLMTFETNYKEVSKIYDQMQRAGLRPD 349

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LI+ Y KAR E+ A  +F+EM+ AG++PTH ++N+LLDA+A SG+VE+A+ VFK
Sbjct: 350  VVSYALLINAYGKARREEEALAVFEEMLDAGIRPTHKSYNILLDAFAISGMVEQARTVFK 409

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++   PD+CSYTTML AYVNAS++EGAE FF R+K DG  PN V YG L+KGY K +
Sbjct: 410  SMRRDGYTPDICSYTTMLLAYVNASNLEGAENFFKRLKQDGLQPNVVTYGTLMKGYAKVN 469

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM++ YEEM+  G+K N TI+TTLMDA+G+N DF SA+IW+KEM SSG  PD+KAKN
Sbjct: 470  NLEKMMETYEEMQLNGIKANQTIFTTLMDAYGKNRDFGSAVIWYKEMESSGVPPDRKAKN 529

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 530  ILLSLA 535



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            +++++  Y K G+YEKA +    M E  V      Y +L+         SK   I+ +MQ
Sbjct: 286  FHMMIYMYKKAGSYEKARKLFALMAERGVKQSTVTYNSLMTFETNYKEVSK---IYDQMQ 342

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P VV+Y  +I       + +EA  +F  +LD     ++P  + +++++  +   G
Sbjct: 343  RAGLRPDVVSYALLINAYGKARREEEALAVFEEMLD---AGIRPTHKSYNILLDAFAISG 399

Query: 922  KNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR----DELFNEVYRSGLRPDVVTYT 1089
              ++A+ +   M   G      ++ +++            +  F  + + GL+P+VVTY 
Sbjct: 400  MVEQARTVFKSMRRDGYTPDICSYTTMLLAYVNASNLEGAENFFKRLKQDGLQPNVVTYG 459

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFKRMRKE 1269
             L+  YAK  N +   E ++EM   G+K     F  L+DAY ++     A + +K M   
Sbjct: 460  TLMKGYAKVNNLEKMMETYEEMQLNGIKANQTIFTTLMDAYGKNRDFGSAVIWYKEMESS 519

Query: 1270 RCFPDLCSYTTMLSAYVNASDMEGAEKFF--TRIKADGF 1380
               PD  +   +LS    A + + A +       K +GF
Sbjct: 520  GVPPDRKAKNILLSLAKTADEQKEANQLVGCMEAKVNGF 558


>gb|EMJ18179.1| hypothetical protein PRUPE_ppa002772mg [Prunus persica]
          Length = 635

 Score =  495 bits (1275), Expect = e-137
 Identities = 238/426 (55%), Positives = 324/426 (76%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++M EIE  GSAV+V+ + R+    +P++L+LG L RFK  K W  VS+++EWL+ Q+
Sbjct: 73   WRRLMNEIEETGSAVSVLKSERLKDRTIPKDLVLGTLVRFKQLKKWNLVSQILEWLQTQN 132

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+F+++D+ +L+ AYGKQG++  AE+ L  M E  +   V ++TAL+EAYGK G  + A
Sbjct: 133  WWDFSKMDFLMLITAYGKQGHFNGAEKVLSLMNEKGIPPSVISHTALMEAYGKGGRYNNA 192

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS VTYQ ++KI V+  KF EAEEIF ++LD+ +  +KPD++MFH+M
Sbjct: 193  EAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFKEAEEIFETLLDEGKSPLKPDQKMFHMM 252

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MYKK+G  D+A+++   M  RG+ Q TVT+NSLM+ E   K   +++N++ R+GLRPD
Sbjct: 253  IYMYKKVGSYDKARKMFALMAERGVQQSTVTYNSLMSFETNYKEVSKMYNQMQRAGLRPD 312

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LIS Y KAR E+ A  +F+EM+ AGV+PT  A+N+LLDA+A SG+V++A+ VFK
Sbjct: 313  VVSYALLISAYGKARREEEALAVFEEMLDAGVRPTSKAYNILLDAFAVSGMVDQARTVFK 372

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++R  PDLCSYTTMLSAYVNASDMEGAEKFF RIK D   PN V YG LIKGY K +
Sbjct: 373  SMRRDRYKPDLCSYTTMLSAYVNASDMEGAEKFFLRIKQDALKPNIVTYGTLIKGYAKTN 432

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            N+EKM++KYEEM+  G+KPN TI TT+MDA+G+N DF SA++W+KEM +    PDQKAKN
Sbjct: 433  NIEKMMEKYEEMQAAGVKPNQTILTTIMDAYGKNRDFGSAVVWYKEMETCRLPPDQKAKN 492

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 493  ILLSLA 498


>ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
            [Vitis vinifera] gi|302143502|emb|CBI22063.3| unnamed
            protein product [Vitis vinifera]
          Length = 548

 Score =  494 bits (1271), Expect = e-137
 Identities = 239/427 (55%), Positives = 320/427 (74%), Gaps = 1/427 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQ 534
            +WR+MMKEIE  GSAV+V++        LPR+L+LG L RFK  K W  VSE++EWL+ Q
Sbjct: 77   KWRRMMKEIEEVGSAVSVLSTKN---QALPRDLVLGTLVRFKQLKKWSLVSEILEWLQTQ 133

Query: 535  DWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSK 714
             WW+F+ +D+ +L+ AYGKQG++ KAE+    M +      V ++TAL+EAYGK    +K
Sbjct: 134  PWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNK 193

Query: 715  ALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHL 894
            A S+F+RM SSGP PS +TYQ ++KI V+ +KF EAEE F ++LDDE+  +KPD++MFH+
Sbjct: 194  AESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHM 253

Query: 895  MIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRP 1071
            MI+MY+K G  ++A+++   M  RG+PQ TVT+NSLM+ E   K   + ++++ R+GLRP
Sbjct: 254  MIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQRAGLRP 313

Query: 1072 DVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVF 1251
            DVV+Y  LI+ Y KAR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+V++A+ VF
Sbjct: 314  DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 373

Query: 1252 KRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKE 1431
            K MR++RC PD+CSYTTMLSAYVNASDMEGAEKFF R+K DGF PN V YG LIKGY K 
Sbjct: 374  KSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKI 433

Query: 1432 SNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAK 1611
            SNLEKM++KYEEM+  G+K N  IYT +MDA+G+N DF SA+ WFKEM   G  PD+KA 
Sbjct: 434  SNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKAT 493

Query: 1612 NILHSLA 1632
            NIL SLA
Sbjct: 494  NILLSLA 500



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 4/233 (1%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            YN LM     + NY++  +T D M+ A +  DV +Y  LI AYGK+    +AL++F+ M 
Sbjct: 286  YNSLM---SFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEML 342

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P+   Y  ++         D+A  +F S+    R    PD   +  M+  Y    
Sbjct: 343  DAGVRPTHKAYNILLDAFAISGMVDQARTVFKSM---RRDRCTPDICSYTTMLSAYVNAS 399

Query: 922  KNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGI----KRDELFNEVYRSGLRPDVVTYT 1089
              + A++    +   G     VT+ +L+ G   I    K  E + E+   G++ +   YT
Sbjct: 400  DMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYT 459

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
             ++  Y K ++  +A   F EM   GV P   A N+LL         EEA ++
Sbjct: 460  AMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEEANLL 512


>ref|XP_004303905.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Fragaria vesca subsp. vesca]
          Length = 601

 Score =  493 bits (1269), Expect = e-136
 Identities = 236/426 (55%), Positives = 322/426 (75%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++M EIE  GSAVTV+ + ++    +P++++LG L RFK  + W  V E++EWL+ QD
Sbjct: 73   WRRLMNEIEEKGSAVTVLKSEKLKNKMIPKDVVLGTLVRFKQLRKWNLVGEILEWLQTQD 132

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+F+ +D+ +L+ AYGKQG + +AE+ L  + E      V ++TAL+EAYGK G  + A
Sbjct: 133  WWDFSEMDFLMLITAYGKQGKFNRAEKVLSLLNEKSYAPSVISHTALMEAYGKGGRYNNA 192

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS VTYQ ++KI V+  KF EAEEIF ++LDDE+  +KPD++MFH+M
Sbjct: 193  EAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFQEAEEIFETLLDDEKSPLKPDQKMFHMM 252

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+M+KK G  ++A+++   M  RGI Q TVT+NSLM+ E   K   +++N++ R+GLRPD
Sbjct: 253  IYMFKKAGSYEKARKMFAVMTERGIRQSTVTYNSLMSFENNYKEVSKMYNQMQRAGLRPD 312

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LIS Y KAR E+ A  +F+EM+ AGV+PT  A+N+LLDA+A SG+V++A+ VFK
Sbjct: 313  VVSYALLISAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAVSGMVDQARTVFK 372

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++R  PD+ SYTTMLSAYVNA DMEGAEKFFTR+K DGF PN V YG LIKGY K +
Sbjct: 373  SMRRDRYEPDIYSYTTMLSAYVNAPDMEGAEKFFTRLKVDGFKPNVVTYGTLIKGYAKTN 432

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            ++EKM++KYEEM+  G+KPN TI TT+MDA+G+N DF SA++W+KEM S    PDQKAKN
Sbjct: 433  DIEKMMEKYEEMQACGVKPNQTILTTIMDAYGKNRDFGSAVVWYKEMESCRLPPDQKAKN 492

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 493  ILLSLA 498


>ref|XP_006402731.1| hypothetical protein EUTSA_v10005856mg [Eutrema salsugineum]
            gi|557103830|gb|ESQ44184.1| hypothetical protein
            EUTSA_v10005856mg [Eutrema salsugineum]
          Length = 587

 Score =  490 bits (1261), Expect = e-135
 Identities = 238/428 (55%), Positives = 321/428 (75%), Gaps = 2/428 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV+V+   R  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72   RWRGLMLEIESTGSAVSVLRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 132  QNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCN 191

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQSSGP PS VTYQ ++K  V+ +KF EAEE+F ++LD++   +KPD++M+H
Sbjct: 192  NAEAIFRRMQSSGPEPSAVTYQIILKTFVEGNKFKEAEEVFETLLDEKISPLKPDQKMYH 251

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  D+A+++   M  +G+PQ TVT+NSLM+ E   K   ++++++ RSG++
Sbjct: 252  MMIYMYKKAGNYDKARKVFASMAGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGIQ 311

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 312  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDLCSYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YGA+IKGY K
Sbjct: 372  FKSMRRDRFFPDLCSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGAMIKGYAK 431

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             ++LEK+++ YE+MR  G+K N TI TT+MD  GR  DF SA+ W+KEM S G  PDQKA
Sbjct: 432  ANDLEKVMEVYEKMRLSGIKANQTILTTIMDVSGRCKDFGSALSWYKEMESCGVPPDQKA 491

Query: 1609 KNILHSLA 1632
            KN+L SLA
Sbjct: 492  KNVLLSLA 499


>ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297324094|gb|EFH54515.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 582

 Score =  490 bits (1261), Expect = e-135
 Identities = 237/427 (55%), Positives = 321/427 (75%), Gaps = 2/427 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV V+   R  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72   RWRGLMLEIESTGSAVPVLRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 132  QNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCN 191

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQSSGP PS VTYQ ++K  V+ DKF EAEE+F ++LD+++  +KPD++M+H
Sbjct: 192  NAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  D+A+++ + M+ +G+PQ TVT+NSLM+ E   K   ++++++ RSG++
Sbjct: 252  MMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGIQ 311

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 312  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDL SYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YG +IKGY K
Sbjct: 372  FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAK 431

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             +++EKM++ YE+MR  G+K N TI TT+MDA GR  DF SA+ W+KEM S G  PDQKA
Sbjct: 432  ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKA 491

Query: 1609 KNILHSL 1629
            KN+L SL
Sbjct: 492  KNVLLSL 498


>ref|XP_006836335.1| hypothetical protein AMTR_s00092p00083700 [Amborella trichopoda]
            gi|548838853|gb|ERM99188.1| hypothetical protein
            AMTR_s00092p00083700 [Amborella trichopoda]
          Length = 506

 Score =  486 bits (1250), Expect = e-134
 Identities = 236/425 (55%), Positives = 320/425 (75%), Gaps = 1/425 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WRK+M++IE  GSAV+V+   R     LP++L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 71   WRKVMRDIEESGSAVSVLRNQRSRGQALPKDLVLGTLMRFKQLKKWDLVSEILEWLRCQH 130

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGK  ++ KAE+ L  M +     +V ++TA++EAYG++G  +KA
Sbjct: 131  WWDFNEMDFLMLITAYGKLRDFNKAERVLRYMNKKGYPPNVGSHTAVMEAYGRAGQYNKA 190

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS +TYQ ++K  VD  KF EAEEIF+S+LD+E   +KPD++M+H+M
Sbjct: 191  EAIFRRMQSSGPEPSALTYQIILKTFVDAGKFKEAEEIFNSLLDNENAPLKPDQKMYHMM 250

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I MY+K G  ++A++L  +M A+G+ Q TVTFNSLM+ E   K     ++++ R+GL+PD
Sbjct: 251  IFMYRKAGNYEQARKLFADMGAKGMTQSTVTFNSLMSFETNFKEASNTYDQMQRAGLQPD 310

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            V +Y+ LIS YAKAR E  A  +F+EM+ AGV+PT  A+N+LLDA+A +G+VEEA+  FK
Sbjct: 311  VASYSLLISTYAKARREDEALAVFEEMLDAGVRPTRKAYNILLDAFALTGMVEEARTAFK 370

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR+++C PDLCSYTTML+AYVNASDM+GAEKFF R+K DGF PN V YG L+KGY K +
Sbjct: 371  SMRRDKCHPDLCSYTTMLAAYVNASDMDGAEKFFVRMKRDGFEPNVVTYGTLMKGYAKVN 430

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM+  Y+EMR  G+K NVTI+T LMDAHG+  DF S I+W+KEM S+GC PDQKAKN
Sbjct: 431  NLEKMMGIYDEMRMHGIKANVTIFTILMDAHGKQ-DFGSGIVWYKEMQSNGCMPDQKAKN 489

Query: 1615 ILHSL 1629
            IL SL
Sbjct: 490  ILLSL 494


>ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332646343|gb|AEE79864.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  484 bits (1247), Expect = e-134
 Identities = 234/428 (54%), Positives = 321/428 (75%), Gaps = 2/428 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV V+   +  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 79   RWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 138

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 139  QNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN 198

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQSSGP PS +TYQ ++K  V+ DKF EAEE+F ++LD+++  +KPD++M+H
Sbjct: 199  NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  ++A+++ + M+ +G+PQ TVT+NSLM+ E   K   ++++++ RS ++
Sbjct: 259  MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ 318

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 319  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDL SYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YG LIKGY K
Sbjct: 379  FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             +++EKM++ YE+MR  G+K N TI TT+MDA GR  +F SA+ W+KEM S G  PDQKA
Sbjct: 439  ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKA 498

Query: 1609 KNILHSLA 1632
            KN+L SLA
Sbjct: 499  KNVLLSLA 506


>ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g59040 gi|332646344|gb|AEE79865.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 583

 Score =  484 bits (1247), Expect = e-134
 Identities = 234/428 (54%), Positives = 321/428 (75%), Gaps = 2/428 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV V+   +  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72   RWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 132  QNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN 191

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQSSGP PS +TYQ ++K  V+ DKF EAEE+F ++LD+++  +KPD++M+H
Sbjct: 192  NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  ++A+++ + M+ +G+PQ TVT+NSLM+ E   K   ++++++ RS ++
Sbjct: 252  MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ 311

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 312  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDL SYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YG LIKGY K
Sbjct: 372  FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             +++EKM++ YE+MR  G+K N TI TT+MDA GR  +F SA+ W+KEM S G  PDQKA
Sbjct: 432  ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKA 491

Query: 1609 KNILHSLA 1632
            KN+L SLA
Sbjct: 492  KNVLLSLA 499


>emb|CAB86932.1| putative protein [Arabidopsis thaliana] gi|24030379|gb|AAN41351.1|
            unknown protein [Arabidopsis thaliana]
          Length = 526

 Score =  484 bits (1247), Expect = e-134
 Identities = 234/428 (54%), Positives = 321/428 (75%), Gaps = 2/428 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV V+   +  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 15   RWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 74

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 75   QNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCN 134

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQSSGP PS +TYQ ++K  V+ DKF EAEE+F ++LD+++  +KPD++M+H
Sbjct: 135  NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 194

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  ++A+++ + M+ +G+PQ TVT+NSLM+ E   K   ++++++ RS ++
Sbjct: 195  MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ 254

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 255  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 314

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDL SYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YG LIKGY K
Sbjct: 315  FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 374

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             +++EKM++ YE+MR  G+K N TI TT+MDA GR  +F SA+ W+KEM S G  PDQKA
Sbjct: 375  ANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKA 434

Query: 1609 KNILHSLA 1632
            KN+L SLA
Sbjct: 435  KNVLLSLA 442


>ref|XP_002298285.1| hypothetical protein POPTR_0001s22750g [Populus trichocarpa]
            gi|222845543|gb|EEE83090.1| hypothetical protein
            POPTR_0001s22750g [Populus trichocarpa]
          Length = 575

 Score =  484 bits (1245), Expect = e-134
 Identities = 234/426 (54%), Positives = 319/426 (74%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR++MK+IE  GSAV+V+   RI K  LPR+L+LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 51   WRRLMKQIEDTGSAVSVLRRERIKKDGLPRDLVLGTLVRFKQLKKWDLVSEILEWLQSQH 110

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D+ +L+ AYGK G++  AE  L SM       +V ++TAL+EAYG+ G  + A
Sbjct: 111  WWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNA 170

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQ+SGP PS +TYQ ++K  V+ +KF EAEE+F ++L+ E   ++PD++MFH+M
Sbjct: 171  EAIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMM 230

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+M KK G  ++A+++   M  RG+PQ TVT+NSLM+ E   K   ++++++ RSGLRPD
Sbjct: 231  IYMQKKAGNYEKARKVFALMAERGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSGLRPD 290

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y  LI  Y +AR E+ A  +F+EM+ AGV+P+H A+N+LLDA+A SG+VE+A+VVFK
Sbjct: 291  VVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFK 350

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++RC PDLCSYTTMLSAYVNASDMEGAE FF R++ DG  PN V YGALIKG+ K +
Sbjct: 351  SMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVN 410

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NLEKM++ YEEM+   +K N TI TT+MDA+G+N DF SA+IW+KEM   G  PDQKA+N
Sbjct: 411  NLEKMMEIYEEMQLNSIKANQTILTTIMDAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQN 470

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 471  ILLSLA 476


>ref|XP_006290805.1| hypothetical protein CARUB_v10016912mg [Capsella rubella]
            gi|482559512|gb|EOA23703.1| hypothetical protein
            CARUB_v10016912mg [Capsella rubella]
          Length = 586

 Score =  483 bits (1242), Expect = e-133
 Identities = 235/428 (54%), Positives = 319/428 (74%), Gaps = 2/428 (0%)
 Frame = +1

Query: 355  RWRKMMKEIESCGSAVTVINALRI-GKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKG 531
            RWR +M EIES GSAV V+   R  G   LPR+L+LG L RFK  K W  VSE++EWL+ 
Sbjct: 72   RWRGLMLEIESTGSAVPVLRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRY 131

Query: 532  QDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSS 711
            Q+WWNF+ +D+ +L+ AYGK GN+  AE+ L  + +     +V +YTAL+E+YG+ G  +
Sbjct: 132  QNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCN 191

Query: 712  KALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFH 891
             A +IF+RMQ+SGP PS VTYQ ++K  V+ +KF EAEE+F ++LD+++  +KPD++M+H
Sbjct: 192  NAEAIFRRMQTSGPEPSAVTYQIILKTFVEGNKFKEAEEVFETLLDEKKSPLKPDQKMYH 251

Query: 892  LMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLR 1068
            +MI+MYKK G  D+A+++   M  +G+PQ TVT+NSLM+ E   K   ++++++ RS ++
Sbjct: 252  MMIYMYKKAGNYDKARKVFASMSGKGVPQSTVTYNSLMSFETNYKEVSKIYDQMQRSDVQ 311

Query: 1069 PDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVV 1248
            PDVV+Y  LI  Y +AR E+ A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+AK V
Sbjct: 312  PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371

Query: 1249 FKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGK 1428
            FK MR++R FPDL SYTTMLSAYVNASDMEGAEKFF RIK DGF PN V YG +IKGY K
Sbjct: 372  FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNVVTYGTMIKGYAK 431

Query: 1429 ESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKA 1608
             +++EKM++ YE+MR  G+K N TI TT+MDA GR  DF SA+ W+KEM S G  PDQKA
Sbjct: 432  VNDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALDWYKEMESCGVPPDQKA 491

Query: 1609 KNILHSLA 1632
            KN+L SLA
Sbjct: 492  KNVLLSLA 499


>ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527686|gb|EEF29795.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 553

 Score =  483 bits (1242), Expect = e-133
 Identities = 229/426 (53%), Positives = 318/426 (74%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR +M++IE   S V+V+ +  I    LP+ L+LG L RFK  K W  VS+++EW++ Q 
Sbjct: 75   WRGLMRQIEETDSPVSVLKSKLINNQSLPKHLVLGTLVRFKQLKKWHLVSQILEWVRTQS 134

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+FN +D  +L+ AYGKQGN+  AE+ L  M +     +V ++TAL+EAYG+    + A
Sbjct: 135  WWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNA 194

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             +IF+RMQSSGP PS VTYQ ++K  V+ +KF EAEE+F ++LD+E+  +KPD++MFH+M
Sbjct: 195  EAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMM 254

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+M++K G  ++A+++   M  RG+P+ TVT+NSLM+ E   K   ++++++ RSGL+PD
Sbjct: 255  IYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPD 314

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            V++Y  LI+ Y KAR E  A  +F+EM+ AGV+PTH A+N+LLDA+A SG+VE+A+ VFK
Sbjct: 315  VISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFK 374

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR++R  PDLCSYTTMLSAYVNASDM GAE FF R+K DG  PN V YGALIKGY K +
Sbjct: 375  SMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTN 434

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            NL+KM++KYEEM+ +G+K N TI+TT+MDA+G+N DF SA+IW+KEM   G  PDQKAKN
Sbjct: 435  NLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVPPDQKAKN 494

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 495  ILLSLA 500


>ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
            gi|241940341|gb|EES13486.1| hypothetical protein
            SORBIDRAFT_07g005470 [Sorghum bicolor]
          Length = 602

 Score =  481 bits (1239), Expect = e-133
 Identities = 234/432 (54%), Positives = 316/432 (73%), Gaps = 1/432 (0%)
 Frame = +1

Query: 340  EIPDWRWRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVME 519
            E     WR+MM+EIE  GSAV ++   R GK PLPR+++LG L RFK  K W  VSE++E
Sbjct: 69   EAEQMNWRRMMREIEEAGSAVPILKTQRSGKGPLPRDVILGTLVRFKQLKKWNIVSEILE 128

Query: 520  WLKGQDWWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKS 699
            WL+ Q WW+F+ +D+ +L+ AYGK G++ +AE+ L  M +      V + T L+EAYG+ 
Sbjct: 129  WLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRG 188

Query: 700  GHSSKALSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDK 879
                KA ++F+RMQ+SGP PS VTYQ ++K LV+ DK+ EAE IF  +L+++R + KPD+
Sbjct: 189  KQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQ 248

Query: 880  RMFHLMIHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYR 1056
            +MFH+MI+MYKK G   +A++L  +M  R IP  TVTFNSLM+ E   K    +++++ R
Sbjct: 249  KMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLSTVTFNSLMSFETDYKEVSSIYDQMQR 308

Query: 1057 SGLRPDVVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEE 1236
            +G++PDVV+Y+ LI  Y KAR E+ A  +F+EM+ AGV+PT  ++N+LLDA+A SGLV+E
Sbjct: 309  AGMKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDE 368

Query: 1237 AKVVFKRMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIK 1416
            A  VFK MR+ R  PDLCSYTTM+ AYVNASDM GAEKFF RIK DG  PN V YG L+K
Sbjct: 369  ANTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMK 428

Query: 1417 GYGKESNLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKP 1596
            GY K +N+EK+++ YE MR +G++PN TIYTT+MDAHGRN+DF +A+IWFKEM + G  P
Sbjct: 429  GYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPP 488

Query: 1597 DQKAKNILHSLA 1632
            DQKAKNIL SLA
Sbjct: 489  DQKAKNILLSLA 500


>ref|XP_004972659.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like
            [Setaria italica]
          Length = 602

 Score =  481 bits (1238), Expect = e-133
 Identities = 233/426 (54%), Positives = 315/426 (73%), Gaps = 1/426 (0%)
 Frame = +1

Query: 358  WRKMMKEIESCGSAVTVINALRIGKMPLPRELLLGILTRFKFAKDWRYVSEVMEWLKGQD 537
            WR+MM+EIE  GSAV+++   R GK PLPR+++LG L RFK  K W  VSE++EWL+ Q 
Sbjct: 74   WRRMMREIEEKGSAVSILKTQRSGKEPLPRDVILGTLVRFKQLKKWNIVSEILEWLRTQH 133

Query: 538  WWNFNRLDYNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKA 717
            WW+F  +D+ +L+ AYGK G++ +AE+ L  M +      V + T L+EAYG+     KA
Sbjct: 134  WWDFTEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPSVISQTGLMEAYGRGKQYRKA 193

Query: 718  LSIFKRMQSSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLM 897
             ++F+RMQ+SGP PS VTYQ ++K LV+ DK+ EAE IF  +L+++R + KPD++MFH+M
Sbjct: 194  EAVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAETIFEDLLNEKRASFKPDQKMFHMM 253

Query: 898  IHMYKKIGKNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIKR-DELFNEVYRSGLRPD 1074
            I+MY+K G   +A++L  +M  RGIP  TVTFNSLM+ E   K    +++++ R+GL+PD
Sbjct: 254  IYMYRKSGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSSIYDQMQRAGLKPD 313

Query: 1075 VVTYTQLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFK 1254
            VV+Y+ LI  Y KAR E+ A  +F+EM+ AGV+PT  ++N+LLDA+A SGLV+EA  VFK
Sbjct: 314  VVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFK 373

Query: 1255 RMRKERCFPDLCSYTTMLSAYVNASDMEGAEKFFTRIKADGFVPNAVAYGALIKGYGKES 1434
             MR+ R  PDLCSYTTM+ AYVNASDM GAEKFF RIK DG  PN V YG L+KGY K +
Sbjct: 374  AMRRHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLN 433

Query: 1435 NLEKMVKKYEEMRRKGLKPNVTIYTTLMDAHGRNADFSSAIIWFKEMVSSGCKPDQKAKN 1614
            N+EK+++ YE MR +G++PN TIYTT+MD HGRN+DF +A+IWFKEM + G  PDQKAKN
Sbjct: 434  NVEKVMRVYERMRIQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPPDQKAKN 493

Query: 1615 ILHSLA 1632
            IL SLA
Sbjct: 494  ILLSLA 499



 Score = 90.9 bits (224), Expect = 2e-15
 Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 4/267 (1%)
 Frame = +1

Query: 562  YNLLMLAYGKQGNYEKAEQTLDSMREAQVFIDVAAYTALIEAYGKSGHSSKALSIFKRMQ 741
            +++++  Y K G+Y +A +    M E  + +    + +L+          +  SI+ +MQ
Sbjct: 250  FHMMIYMYRKSGDYAQARKLFAQMSERGIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQ 306

Query: 742  SSGPLPSVVTYQTMIKILVDEDKFDEAEEIFHSVLDDERPAVKPDKRMFHLMIHMYKKIG 921
             +G  P VV+Y  +IK      + +EA  +F  +LD     V+P ++ +++++  +   G
Sbjct: 307  RAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLD---AGVRPTRKSYNILLDAFAISG 363

Query: 922  KNDEAQRLLNEMIARGIPQCTVTFNSLMTGEQGIK----RDELFNEVYRSGLRPDVVTYT 1089
              DEA  +   M    +     ++ +++            ++ F  +   GL+P+VV Y 
Sbjct: 364  LVDEANTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYG 423

Query: 1090 QLISRYAKARNEQAAQEIFDEMIAAGVKPTHMAFNVLLDAYARSGLVEEAKVVFKRMRKE 1269
             L+  Y+K  N +    +++ M   GV+P    +  ++D + R+     A + FK M   
Sbjct: 424  TLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEAR 483

Query: 1270 RCFPDLCSYTTMLSAYVNASDMEGAEK 1350
               PD  +   +LS      + + A +
Sbjct: 484  GYPPDQKAKNILLSLAKTPEEQQEANE 510