BLASTX nr result

ID: Ephedra25_contig00007184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007184
         (901 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   210   5e-52
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   209   9e-52
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              205   2e-50
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   202   1e-49
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   198   2e-48
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   198   3e-48
gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]   197   4e-48
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   195   2e-47
gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]   194   4e-47
ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898...   191   2e-46
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   190   5e-46
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               190   7e-46
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]   188   3e-45
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   187   6e-45
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   186   8e-45
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   186   1e-44
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   185   2e-44
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         185   2e-44
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   185   2e-44
gb|ABW74566.1| integrase [Boechera divaricarpa]                       184   4e-44

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  210 bits (535), Expect = 5e-52
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 8/306 (2%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEG 179
            C+ HMTG K LFK    S+  +V K+   +++ ++G G + +N G   + LL N Y++  
Sbjct: 312  CSNHMTGIKSLFKELDESHKLKV-KLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPS 370

Query: 180  LRRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVMIS*PMECY 356
            L +NL+S+ QL++  Y I+ +  A  +I+ K  + D+ I  V+   N LF +    +E +
Sbjct: 371  LTQNLLSVGQLMVSGYSIL-FDGATCVIKDK--KSDQIIVNVRMAANKLFPLEVSSIEKH 427

Query: 357  ---LTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPF 521
               + +    NLWH++ GH++   LK +   ++V   PK +  +  CE C   K  + PF
Sbjct: 428  ALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK-IDSVNVCEGCIYGKQSKKPF 486

Query: 522  -RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETF 698
             + R+R  +  LEIIH++LCGP+   S+G  RY L FTDD S+M+W Y L++K+E FETF
Sbjct: 487  PKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETF 546

Query: 699  VIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKN 878
              F+  V+ Q+   IK  R+D G EF SN+F +F +++G+ RELTTPY+P+QNGV+ERKN
Sbjct: 547  KKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKN 606

Query: 879  RTLIEM 896
            RT++EM
Sbjct: 607  RTVVEM 612


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  209 bits (533), Expect = 9e-52
 Identities = 121/306 (39%), Positives = 187/306 (61%), Gaps = 8/306 (2%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEG 179
            C+ HMTG K LFK    S+  +V K+   +++ ++G G   +N G   + LL N Y++  
Sbjct: 297  CSNHMTGIKSLFKELDESHKLKV-KLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPS 355

Query: 180  LRRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVMIS*PMECY 356
            L +NL+S+ QL++  Y I+ +  A  +I+ K  + D+ I  V+   N LF +    +E +
Sbjct: 356  LTQNLLSVGQLMVSGYSIL-FDGATCVIKDK--KSDQIIVBVRMAANKLFPLEVSSIEKH 412

Query: 357  ---LTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPF 521
               + +    NLWH++ GH++   LK +   ++V   PK +  +  CE C   K  + PF
Sbjct: 413  ALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK-IDSVNVCEGCIYGKQSKKPF 471

Query: 522  -RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETF 698
             + R+R  +  LEIIH++LCGP+   S+G  RY L FTDD S+M+W Y L++K+E FETF
Sbjct: 472  PKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETF 531

Query: 699  VIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKN 878
              F+  V+ Q+   IK  R+D G EF SN+F +F +++G+ RELTTPY+P QNGV+ERKN
Sbjct: 532  KKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQNGVAERKN 591

Query: 879  RTLIEM 896
            RT++EM
Sbjct: 592  RTVVEM 597


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  205 bits (521), Expect = 2e-50
 Identities = 116/310 (37%), Positives = 185/310 (59%), Gaps = 11/310 (3%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C+ HM G KD F +F  ++ + V K+     +++ G G++ L   +   ++   +YV  L
Sbjct: 326  CSNHMCGKKDYFSDFDGTFRDSV-KLGNNTSMSVLGKGNVRLKVNEMTQIITGVFYVPEL 384

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQ--NGLFVM--IS*PME 350
            + NL+S+ QL  ++   + ++      +CK+    K +    +   N +F++  +S P+ 
Sbjct: 385  KNNLLSIGQL-QEKGLTILFQHG----KCKVFHSQKGLIMDTKMSSNRMFMLYALSQPIS 439

Query: 351  --CYLTKEEN-LNLWHMKLGHISSISLKKIGD--VVNQGPKNLTIIKNCENCCKAKMHRN 515
              C+ T  E+ L LWH + GH+S   LK +    +VN  P+     K C++C   K HR+
Sbjct: 440  STCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDCLVGKQHRS 499

Query: 516  --PFRSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVF 689
              P +S  R   +IL+++H+++CGPI+P+S  +KRY+LTFTDDFS+ TW Y L  KSE F
Sbjct: 500  SIPKKSNWRA-AEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSEAF 558

Query: 690  ETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSE 869
              F  F+  V+ +T++ ++C R+D G EFTS EF +F    GI+R+LT  YTPQQNGV+E
Sbjct: 559  AVFKSFKTYVEKETSSFLRCLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAE 618

Query: 870  RKNRTLIEMV 899
            RKNRT++ MV
Sbjct: 619  RKNRTIMNMV 628


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  202 bits (514), Expect = 1e-49
 Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 7/305 (2%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEG 179
            C+ HMTG K LFK    S+ +  VK+    ++ ++G G + +N G   + LL N Y++  
Sbjct: 439  CSNHMTGIKSLFKELDESH-KLXVKLGDDXQVQVEGKGTVAVNNGHGNVKLLYNVYFIPS 497

Query: 180  LRRNLI---SLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQNGLFVMIS*PME 350
            L   L+   + Y    DQ  +     AN L   +++  +K    VKE             
Sbjct: 498  LTEKLVKCGATYDKKSDQIIVDVRMAANKLFPLEVSSIEKHALVVKE------------- 544

Query: 351  CYLTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPF- 521
               T E NL  WH++ GH++   LK +   ++V + PK +  +  CE C   K  + PF 
Sbjct: 545  ---TSESNL--WHLRYGHLNVKGLKLLSKKEMVFELPK-IDSVNVCEGCIYGKQSKKPFP 598

Query: 522  RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFV 701
            + R+R  +  LEIIH++LCGP+   S+G  RY L FTDD S+M+W Y L++K+E FETF 
Sbjct: 599  KGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFK 658

Query: 702  IFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNR 881
             F+  V+ Q+   IK  R+D   EF SN+F +F +++G+ RELTTPY+P+QNGV+ERKNR
Sbjct: 659  KFKAFVEKQSGKCIKVLRTDRXGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNR 718

Query: 882  TLIEM 896
            T++EM
Sbjct: 719  TVVEM 723


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  198 bits (504), Expect = 2e-48
 Identities = 119/306 (38%), Positives = 179/306 (58%), Gaps = 8/306 (2%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEG 179
            C+ HM+ +K LF++   S    V ++   +++ I+G G + +   +  +  L +  YV  
Sbjct: 317  CSNHMSSSKSLFRDLDESQKSEV-RLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPT 375

Query: 180  LRRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVM--IS*PME 350
            L  NL+S+ QL+   Y +V Y  A  +   K  +  +TIA+V   QN +F +   +    
Sbjct: 376  LAHNLLSVGQLMTSGYSVVFYDNACDI---KDKESGRTIARVPMTQNKMFPLDISNVGNS 432

Query: 351  CYLTKEEN-LNLWHMKLGHISSISLKKI--GDVVNQGPKNLTIIKNCENCCKAKMHRNPF 521
              + KE+N  NLWH++ GH++   LK +   D+V  G  N+  +  CE C   K  R  F
Sbjct: 433  ALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVI-GLPNIKELDLCEGCIYGKQTRKSF 491

Query: 522  R-SRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETF 698
               ++   T  LE++H++LCGP+   S G  RY L FTDD+S+ +W Y LK KSE FETF
Sbjct: 492  PVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETF 551

Query: 699  VIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKN 878
              F+  V+ Q+  KIK  R+D G EF SN+F +F ++ GI+RELT PYTP+QNGV+ERKN
Sbjct: 552  KKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKN 611

Query: 879  RTLIEM 896
            RT++EM
Sbjct: 612  RTVVEM 617


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  198 bits (503), Expect = 3e-48
 Identities = 116/300 (38%), Positives = 184/300 (61%), Gaps = 8/300 (2%)
 Frame = +3

Query: 21   GNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEGLRRNLI 197
            G K LFK    S+  +V K+   +++ ++G G + +N G   + LL N Y++  L +NL+
Sbjct: 252  GIKSLFKELDESHKLKV-KLGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLL 310

Query: 198  SLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVMIS*PMECY---LTK 365
            S+ QL++  Y I+ +  A  +I+ K  + D+ I  V+   N LF +    +E +   + +
Sbjct: 311  SVGQLMVSGYSIL-FDGATCVIKDK--KSDQIIFDVRMAANKLFPLEVSSIEKHALVVKE 367

Query: 366  EENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPF-RSRTR 536
                NLWH++ GH++   LK +   ++V   PK +  +  CE C   K  + PF + R+R
Sbjct: 368  TSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPK-IDSVNVCEGCIYGKQSKKPFPKGRSR 426

Query: 537  TITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFVIFRKK 716
              +  LEIIH++LCGP+   S+G  RY L FT+D S+M+W Y L++K+E FETF  F+  
Sbjct: 427  RASSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAETFETFKKFKAF 486

Query: 717  VQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNRTLIEM 896
            V+ Q+   IK  R+D G EF SN+F +F +++G+ RELTTPY+P+QNGV+ERKNRT++EM
Sbjct: 487  VEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEM 546


>gb|EOY11267.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  197 bits (501), Expect = 4e-48
 Identities = 118/311 (37%), Positives = 174/311 (55%), Gaps = 12/311 (3%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C+TH+TG    F +   +Y +  V+I     L I G G + +   K    + N  +   +
Sbjct: 335  CSTHITGKIKNFLDLNKAY-KSTVEIGDGNLLKIAGRGTVGITTKKGMKTIANVCFAPEV 393

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDD-KTIAKVKEQNGLFVMIS*PME--- 350
             +NL+S+ QLV ++  ++   E      C I     + IA VK +N  F     P++   
Sbjct: 394  TQNLLSVGQLVKEKNSLLFKDEL-----CTIFDPSGREIATVKMRNKCF-----PLDLNE 443

Query: 351  ----CYLTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHR 512
                 Y        LWH +LGHI+   +K +G  ++VN  P    + K CE C + K  R
Sbjct: 444  AGHMAYKCVSNEARLWHRRLGHINYQFIKNMGSLNLVNDMPIITEVEKTCEVCLQGKQSR 503

Query: 513  NPF--RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEV 686
            +PF  +S+TRT  + L++IH+++CGPI  LS    +Y + F DDFS+  W + LK KSE 
Sbjct: 504  HPFPKQSQTRTANR-LQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEA 562

Query: 687  FETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVS 866
             + F+ F+  V+ QT+ KIK  RSDNG+E+TSNEF      +GIK+ LT PY+PQQNGVS
Sbjct: 563  IQYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVPYSPQQNGVS 622

Query: 867  ERKNRTLIEMV 899
            ERKNRT++EM+
Sbjct: 623  ERKNRTIMEMI 633


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  195 bits (496), Expect = 2e-47
 Identities = 115/304 (37%), Positives = 172/304 (56%), Gaps = 6/304 (1%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C  HM+ +   F     S  + +++I    K+  +G GDI ++  K   ++K+  YV  L
Sbjct: 330  CTNHMSKDVRHFIALDRSK-KIIIRIGNGGKVVSEGKGDIRVSTNKGDHVIKDVLYVPEL 388

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQNGLFVMIS*PMECYLT 362
             RNL+S+ Q++ + Y+++   E N  +   +        K+K+++   +      E Y+ 
Sbjct: 389  ARNLLSVSQMISNGYRVIF--EDNKCVIQDLKGRKILDIKMKDRSFPIIWKKSREETYMA 446

Query: 363  ---KEENLNLWHMKLGHIS--SISLKKIGDVVNQGPKNLTIIKNCENCCKAKMHRNPFRS 527
               KEE  +LWH + GH++   I   +   +V + PK   I   C  C   K  R  F  
Sbjct: 447  FEEKEEQTDLWHKRFGHVNYDKIETMQTLKIVEKLPKFEVIKGICAACEMGKQSRRSFPK 506

Query: 528  RTRTIT-KILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFVI 704
            ++++ T K LE+IHS++CGP+   S    RY LTF DDFS+MTW Y LKNKSEV   F I
Sbjct: 507  KSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKI 566

Query: 705  FRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNRT 884
            F+  V+ Q+ ++IK  R+D G EF S EFI   Q+ GI  E+TTPY+PQQNGV+ER+NRT
Sbjct: 567  FKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRT 626

Query: 885  LIEM 896
            L+EM
Sbjct: 627  LVEM 630


>gb|EOY32548.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
          Length = 1266

 Score =  194 bits (493), Expect = 4e-47
 Identities = 116/310 (37%), Positives = 172/310 (55%), Gaps = 11/310 (3%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C+TH+TG    F +   +Y +  V+I     L I+G G I +   K    + N  +   +
Sbjct: 335  CSTHITGKIKNFLDLNKAY-KSTVEIGDGNLLKIEGRGTIGITTKKGIKTIANVCFAPEV 393

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDD-KTIAKVKEQNGLFVMIS*PME--- 350
             +NL+S+ QLV ++  ++   E      C I     + IA VK +N  F     P++   
Sbjct: 394  TQNLLSVGQLVKEKNSLLFKDEL-----CTIFDPSGREIATVKMRNKCF-----PLDLNE 443

Query: 351  ----CYLTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHR 512
                 Y        LWH +LGHI+   +K +G  ++VN  P    + K CE C + K  R
Sbjct: 444  AGHMAYKCVSNEARLWHRRLGHINYQFIKNMGSLNLVNDMPVITEVEKTCEVCLQGKQSR 503

Query: 513  NPFRSRTRT-ITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVF 689
            +PF  +++T  T  L++IH+++CGPI  LS    +Y + F DDFS+  W + LK KSE  
Sbjct: 504  HPFPKQSQTRATNRLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAI 563

Query: 690  ETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSE 869
            + F+ F+  V+ QT+ KIK  RSDNG+E+TSNEF      +GIK+ LT  Y+PQQNGVSE
Sbjct: 564  QYFMKFKVLVEKQTDQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVTYSPQQNGVSE 623

Query: 870  RKNRTLIEMV 899
            RKNRT++EM+
Sbjct: 624  RKNRTIMEMI 633


>ref|XP_002064813.1| GK15001 [Drosophila willistoni] gi|194160898|gb|EDW75799.1| GK15001
            [Drosophila willistoni]
          Length = 1249

 Score =  191 bits (486), Expect = 2e-46
 Identities = 110/300 (36%), Positives = 167/300 (55%), Gaps = 4/300 (1%)
 Frame = +3

Query: 9    THMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGLRR 188
            +HM  +K +F +F  S  +  + +A    L  +G G + +  G  K+ + N  YV GL  
Sbjct: 277  SHMCCDKSMFSDF--SVHDEKISLADAGYLRAEGKGKVTIRTGICKLTMNNVLYVPGLAG 334

Query: 189  NLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQNGLFVMIS*PMECYLTKE 368
            N +S+ +++  +Y  V + E +     KI Q+ + I K K+   LFV  +     +    
Sbjct: 335  NFMSVARVI--EYNSVVHFEKH---MAKIIQNGECILKAKKIGNLFVFEAESENLFAAVG 389

Query: 369  ENLNLWHMKLGHISSISLKKI---GDVVNQGPKNLTIIKNCENCCKAKMHRNPFRSRTRT 539
            E+++LWH + GH++  SL +I   G V      N      C+ C  +K+H  PF   T +
Sbjct: 390  EDVSLWHKRFGHLNYKSLTQIASKGLVRGLSVTNFAPNTPCKTCMVSKIHVQPFPKMTES 449

Query: 540  -ITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFVIFRKK 716
              +++L+++HS++CGP    S G  RY LTF DD S+  + Y LK K EVF  F+ F+  
Sbjct: 450  RSSELLQLVHSDVCGPFGTKSLGGSRYFLTFIDDKSRRIFVYFLKGKDEVFGKFLEFKSL 509

Query: 717  VQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNRTLIEM 896
            V+ QT  K+KC RSDNG E+ +N F  + +  GI R+LT  YTPQQNGV+ER NRTL+EM
Sbjct: 510  VERQTGKKLKCIRSDNGREYVNNAFDDYLKKNGILRQLTIAYTPQQNGVAERANRTLVEM 569


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  190 bits (483), Expect = 5e-46
 Identities = 113/304 (37%), Positives = 174/304 (57%), Gaps = 6/304 (1%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C +HMT +  +F +   S   +V K+   E +  KG G I ++  +   ++ N  Y+  L
Sbjct: 322  CTSHMTKHLSIFTSIDRSVQPKV-KLGNGEVVQAKGKGTIAISTKRGTKIVTNVLYIPDL 380

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKT-IAKVKEQNGLFVMIS*PMECYL 359
             +NL+S+ Q++ + Y  V++KE      C I+    T IAK+K     F +    +E ++
Sbjct: 381  DQNLLSVAQMLRNGYA-VSFKENF----CFISDVHGTKIAKIKMNGNSFYLKLDLVEGHV 435

Query: 360  --TKEENLNLWHMKLGHISSISLKKIGD--VVNQGPKNLTIIKNCENCCKAKMHRNPF-R 524
               K +   +WH + GH +  SL+ + +  +V   P+     + CE+C   K  R PF +
Sbjct: 436  FSAKIDESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQ 495

Query: 525  SRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFVI 704
            + ++  T  LE+IHS++CGP+S  S     Y   F DDFS+MTW Y LK KS+V   F  
Sbjct: 496  NMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKS 555

Query: 705  FRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNRT 884
            F+K V+TQ+   +K  R+DNG E+TS EF +F Q+ GI  +LT PY+PQQNGVS+RKNRT
Sbjct: 556  FKKMVETQSGQNVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQQNGVSKRKNRT 615

Query: 885  LIEM 896
            ++EM
Sbjct: 616  VMEM 619


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  190 bits (482), Expect = 7e-46
 Identities = 116/314 (36%), Positives = 170/314 (54%), Gaps = 15/314 (4%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
            C+ HMTG+K+ F      +  R VK+    ++++ G G + +       ++   YYV  L
Sbjct: 306  CSNHMTGSKEWFSELEEGFN-RTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPEL 364

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQNG---LFVMIS*PME- 350
            R NL+SL QL   Q + +A    +G   CK+    K        +G    F++ S P + 
Sbjct: 365  RNNLLSLGQL---QERGLAILIRDGT--CKVYHPSKGAIMETNMSGNRMFFLLASKPQKN 419

Query: 351  --CYLTKE----ENLNLWHMKLGHISSISLKKIGDVVNQGPKNLTIIKN----CENCCKA 500
              C  T+E    EN +LWH + GH++   LK +     +    L I+K     C  C   
Sbjct: 420  SLCLQTEEVMDKEN-HLWHCRFGHLNQEGLKLLAH--KKMVIGLPILKATKEICAICLTG 476

Query: 501  KMHRNPFRSRTRTITKI-LEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNK 677
            K HR     +T   +   L+++HS++CGPI+P+S+  KRYIL+F DDF++ TW Y L  K
Sbjct: 477  KQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEK 536

Query: 678  SEVFETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQN 857
            SE F TF IF+  V+ +    + C R+D G EFTSNEF  F +  GI R+LT  +TPQQN
Sbjct: 537  SEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQN 596

Query: 858  GVSERKNRTLIEMV 899
            GV+ERKNRT++  V
Sbjct: 597  GVAERKNRTIMNAV 610


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score =  188 bits (477), Expect = 3e-45
 Identities = 114/309 (36%), Positives = 176/309 (56%), Gaps = 10/309 (3%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFG-KNKILLKNTYYVEG 179
            C+ HM G+K  F +   ++   V       K+++ G G + ++   K+  ++ N ++V  
Sbjct: 299  CSNHMCGDKSAFSDLDETFRXSVT-FGDNSKVSVMGKGSVXIHSKEKSDQIISNVFFVPD 357

Query: 180  LRRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKT--IAKVK-EQNGLFVMI--S*P 344
            L+ NL+S+ QL    Y+I      +G+  C+I QD+K   IA+V    N +F +   +  
Sbjct: 358  LKTNLLSVXQLQEKGYEIFI---KDGV--CRI-QDEKLGLIAQVNMTTNRMFPLYLDNTT 411

Query: 345  MECYLTKEENLN-LWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRN 515
              C+ TK  +   LWH + GH++   LK +   ++V   P   T  + CE C   K HR 
Sbjct: 412  QNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGLPPIXTPSQICEECVVGKQHRY 471

Query: 516  PF-RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFE 692
             F + ++    K+LE++HS++CGPI+P S G KRY +TF  D+S  TW Y L+ KSE F 
Sbjct: 472  QFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITFIXDYSXKTWVYFLQEKSEAFS 531

Query: 693  TFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSER 872
            TF  F+  V+ +    IK FRSD G E+TS EF+ F ++ GI+++LT  Y+PQQNG S R
Sbjct: 532  TFKSFKMLVEKEAXKPIKIFRSDXGGEYTSQEFVNFCENHGIQKQLTAAYSPQQNGXSXR 591

Query: 873  KNRTLIEMV 899
            KNRT++ MV
Sbjct: 592  KNRTILNMV 600


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  187 bits (474), Expect = 6e-45
 Identities = 117/310 (37%), Positives = 175/310 (56%), Gaps = 13/310 (4%)
 Frame = +3

Query: 6    NTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGK-NKILLKNTYYVEGL 182
            + HM G K +F     S    V  +  + K+ +KG G+I++     +   + N YY+  +
Sbjct: 342  SNHMCGRKSMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSM 400

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVM-----IS*P 344
            + N++SL QL+   Y I   K+ N  I+    Q+   I KV   +N +FV+     I+  
Sbjct: 401  KTNILSLGQLLEKGYDI-RLKDNNLSIR---DQESNLITKVPMSKNRMFVLNIRNDIAQC 456

Query: 345  ME-CYLTKEENLNLWHMKLGHISSISLKKIGDVVNQGPKNLTIIKN----CENCCKAKMH 509
            ++ CY  KEE+  LWH++ GH++   L+ +     +  + L  I +    CE C   K  
Sbjct: 457  LKMCY--KEESW-LWHLRFGHLNFGGLELLSR--KEMVRGLPCINHPNQVCEGCLLGKQF 511

Query: 510  RNPF-RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEV 686
            +  F +  +    K LE+IH+++CGPI P S G+  Y L F DDFS+ TW Y LK KSEV
Sbjct: 512  KMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571

Query: 687  FETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVS 866
            FE F  F+  V+ ++   IK  RSD G EFTS EF+ + +D GI+R+LT P +PQQNGV+
Sbjct: 572  FEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVA 631

Query: 867  ERKNRTLIEM 896
            ERKNRT++EM
Sbjct: 632  ERKNRTILEM 641


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  186 bits (473), Expect = 8e-45
 Identities = 117/310 (37%), Positives = 175/310 (56%), Gaps = 13/310 (4%)
 Frame = +3

Query: 6    NTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGK-NKILLKNTYYVEGL 182
            + HM G K +F     S    V  +  + K+ +KG G+I++     +   + N YY+  +
Sbjct: 342  SNHMCGRKSMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSM 400

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVM-----IS*P 344
            + N++SL QL+   Y I   K+ N  I+    Q+   I KV   +N +FV+     I+  
Sbjct: 401  KTNILSLGQLLEKGYDI-RLKDNNLSIR---DQESNLITKVPMSKNRMFVLNIRNDIAQC 456

Query: 345  ME-CYLTKEENLNLWHMKLGHISSISLKKIGDVVNQGPKNLTIIKN----CENCCKAKMH 509
            ++ CY  KEE+  LWH++ GH++   L+ +     +  + L  I +    CE C   K  
Sbjct: 457  LKMCY--KEESW-LWHLRFGHLNFGGLELLSR--KEMVRGLPCINHPNQVCEGCLLGKQF 511

Query: 510  RNPF-RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEV 686
            +  F +  +    K LE+IH+++CGPI P S G+  Y L F DDFS+ TW Y LK KSEV
Sbjct: 512  KMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571

Query: 687  FETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVS 866
            FE F  F+  V+ ++   IK  RSD G EFTS EF+ + +D GI+R+LT P +PQQNGV+
Sbjct: 572  FEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVA 631

Query: 867  ERKNRTLIEM 896
            ERKNRT++EM
Sbjct: 632  ERKNRTILEM 641


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  186 bits (471), Expect = 1e-44
 Identities = 113/304 (37%), Positives = 167/304 (54%), Gaps = 6/304 (1%)
 Frame = +3

Query: 3   CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKILLKNTYYVEGL 182
           C  HMT N+ LF      + +  +++     +  +G GDI +   K+K  +++   V  L
Sbjct: 36  CTNHMTPNEKLFTKINRDF-KVPIRVGNGAVMMSEGKGDIEVMTRKDKRGIRDVLLVPKL 94

Query: 183 RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDD-KTIAKVKEQNGLFVM--IS*PMEC 353
            +NL+S+ Q++++ YQ+           C I     K I +V+  N  F +  +S     
Sbjct: 95  GKNLLSVPQMIINGYQVTLKNN-----YCTIHDSARKKIGEVEMVNKSFHLRWLSNEETA 149

Query: 354 YLTKEENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPFRS 527
            + K+E   LWH +LGH    +LK +   ++V   PK       CE+C  +K  R+PF  
Sbjct: 150 MVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPK 209

Query: 528 RTRTITKI-LEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETFVI 704
            + T  K  LE+IHS++CGP+   S    RYILTF DD ++M W Y LK KSEVF+TF  
Sbjct: 210 ESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQTFKK 269

Query: 705 FRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKNRT 884
           F+  V+   N +IK  R D GTE+ S EF  F +  GI+R+LT  Y+PQQN VSER+NR+
Sbjct: 270 FKNLVENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRS 329

Query: 885 LIEM 896
           L+EM
Sbjct: 330 LVEM 333


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  185 bits (470), Expect = 2e-44
 Identities = 120/311 (38%), Positives = 167/311 (53%), Gaps = 14/311 (4%)
 Frame = +3

Query: 6    NTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNF--GKNKILLKNTYYVEG 179
            + HMTG+K  F     S   RV K      + I G G II     G+ K LL N YY+  
Sbjct: 208  SNHMTGDKSFFSELNESIKGRV-KFGDGSCVKINGKGSIIFEAKTGEQK-LLTNIYYIPE 265

Query: 180  LRRNLISLYQL--------VMDQYQIVAYKEANGLIQCKITQDDKTIAKVKEQNGLFVMI 335
            LR N++SL Q         + D Y  +  ++ +G +  K+ +    + KV  + G     
Sbjct: 266  LRSNILSLGQATEQGCDVRMKDNY--LTLRDPSGRLLVKVLRSPNRLYKVSLKVG----- 318

Query: 336  S*PMECYLTK-EENLNLWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKM 506
                 C LTK  E    WH +LGHI+  ++K +   ++V   P+     K CE+C   K 
Sbjct: 319  --KPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQ 376

Query: 507  HRNPFRSRT-RTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSE 683
             RN F S T    +++LE++H++LCGPISP +  + RYI    DD ++  WS LLK KSE
Sbjct: 377  TRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEKSE 436

Query: 684  VFETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGV 863
            VFE F  F+  V+ + N  I   R+D G EFTS +F  +  + GI+R LT PYTPQQNGV
Sbjct: 437  VFEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGV 496

Query: 864  SERKNRTLIEM 896
             ER+NRTL+EM
Sbjct: 497  VERRNRTLMEM 507


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  185 bits (470), Expect = 2e-44
 Identities = 117/310 (37%), Positives = 174/310 (56%), Gaps = 13/310 (4%)
 Frame = +3

Query: 6    NTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGK-NKILLKNTYYVEGL 182
            + HM G K +F     S    V  +  + K+ +KG G+I++     +   + N YY+  +
Sbjct: 342  SNHMCGRKSMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSM 400

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVM-----IS*P 344
            + N++SL QL+   Y I   K+ N  I+    Q+   I KV   +N +FV+     I+  
Sbjct: 401  KTNILSLGQLLEKGYDI-RLKDNNLSIR---DQESNLITKVPMSKNRMFVLNIRNDIAQC 456

Query: 345  ME-CYLTKEENLNLWHMKLGHISSISLKKIGDVVNQGPKNLTIIKN----CENCCKAKMH 509
            ++ CY  KEE+  LWH++ GH++   L+ +     +  + L  I +    CE C   K  
Sbjct: 457  LKMCY--KEESW-LWHLRFGHLNFGGLELLSR--KEMVRGLPCINHPNQVCEGCLLGKQF 511

Query: 510  RNPF-RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEV 686
            +  F +  +    K LE+IH+++CGPI P S G+  Y L F DDFS+ TW Y LK KSEV
Sbjct: 512  KMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571

Query: 687  FETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVS 866
            FE F  F+  V+ ++   IK  RSD G EFTS EF+ + +D GI+R+LT P +PQQNGV 
Sbjct: 572  FEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVV 631

Query: 867  ERKNRTLIEM 896
            ERKNRT++EM
Sbjct: 632  ERKNRTILEM 641


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  185 bits (470), Expect = 2e-44
 Identities = 117/310 (37%), Positives = 174/310 (56%), Gaps = 13/310 (4%)
 Frame = +3

Query: 6    NTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGK-NKILLKNTYYVEGL 182
            + HM G K +F     S    V  +  + K+ +KG G+I++     +   + N YY+  +
Sbjct: 342  SNHMCGRKSMFAELDESVRGNVA-LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSM 400

Query: 183  RRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVK-EQNGLFVM-----IS*P 344
            + N++SL QL+   Y I   K+ N  I+    Q+   I KV   +N +FV+     I+  
Sbjct: 401  KTNILSLGQLLEKGYDI-RLKDNNLSIR---DQESNLITKVPMSKNRMFVLNIRNDIAQC 456

Query: 345  ME-CYLTKEENLNLWHMKLGHISSISLKKIGDVVNQGPKNLTIIKN----CENCCKAKMH 509
            ++ CY  KEE+  LWH++ GH++   L+ +     +  + L  I +    CE C   K  
Sbjct: 457  LKMCY--KEESW-LWHLRFGHLNFGGLELLSR--KEMVRGLPCINHPNQVCEGCLLGKQF 511

Query: 510  RNPF-RSRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEV 686
            +  F +  +    K LE+IH+++CGPI P S G+  Y L F DDFS+ TW Y LK KSEV
Sbjct: 512  KMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEV 571

Query: 687  FETFVIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVS 866
            FE F  F+  V+ ++   IK  RSD G EFTS EF+ + +D GI+R+LT P +PQQNGV 
Sbjct: 572  FEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVV 631

Query: 867  ERKNRTLIEM 896
            ERKNRT++EM
Sbjct: 632  ERKNRTILEM 641


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  184 bits (467), Expect = 4e-44
 Identities = 111/306 (36%), Positives = 175/306 (57%), Gaps = 8/306 (2%)
 Frame = +3

Query: 3    CNTHMTGNKDLFKNFTNSYGERVVKIAGKEKLAIKGYGDIILNFGKNKI-LLKNTYYVEG 179
            C+ HMTG K  FK    S+  +V K+   +++ ++G G + ++ G   + L+   YY+  
Sbjct: 153  CSNHMTGTKSSFKELDESHKLKV-KLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPD 211

Query: 180  LRRNLISLYQLVMDQYQIVAYKEANGLIQCKITQDDKTIAKVKE-QNGLFV--MIS*PME 350
            L  NL+S+ Q+V +   ++   + N  +  K  +   T+A VK+  N L+   M S   +
Sbjct: 212  LAHNLLSVGQMVENNCSVLF--DGNECV-IKEKKSGVTLAMVKKTSNNLYPLEMSSVETK 268

Query: 351  CYLTKEENLN-LWHMKLGHISSISLKKIG--DVVNQGPKNLTIIKNCENCCKAKMHRNPF 521
              + K  +++ L H++ GH+    L+ +   D+V   PK +  +K CE C   K  R  F
Sbjct: 269  ALVAKVSDISKLLHLRYGHLHENGLRVLNQKDMVIGLPK-IGALKLCEGCVYGKQSRRSF 327

Query: 522  R-SRTRTITKILEIIHSNLCGPISPLSYGEKRYILTFTDDFSKMTWSYLLKNKSEVFETF 698
               R R  T+ LEI+H++LCGP+   S G  +Y L  TDD+S+M+W Y LK+K E F+ F
Sbjct: 328  PVGRARRATQYLEIVHADLCGPMQTASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAFDMF 387

Query: 699  VIFRKKVQTQTNTKIKCFRSDNGTEFTSNEFIMFFQDKGIKRELTTPYTPQQNGVSERKN 878
              F+  V+ Q+  ++K  R+D G EFTS +F  F + +GI  ELTT YTP+QNGV+ERKN
Sbjct: 388  KNFKALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKN 447

Query: 879  RTLIEM 896
             T++EM
Sbjct: 448  TTVVEM 453


Top