BLASTX nr result

ID: Ephedra25_contig00007096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007096
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17803.1| unknown [Picea sitchensis]                              76   4e-12
ref|XP_006829101.1| hypothetical protein AMTR_s00001p00263560 [A...    57   3e-06

>gb|ABR17803.1| unknown [Picea sitchensis]
          Length = 536

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = -2

Query: 430 DGEEIKEKLRNWADVSMRGTYSTESIGSVAMVAKACVEEDPYDRPSVAEIVYRLSNALDG 251
           +GE+I+ KLR W D +++  Y+ +SI  VA +A+ACVEEDP  RP++ EIVY+LSN  D 
Sbjct: 459 EGEDIEGKLRKWVDRNLQNAYTMDSILGVATIARACVEEDPVARPTLPEIVYKLSNLFDA 518

Query: 250 CQS--DDSVNIFLPVDAR 203
           C S  D+ + I   +  R
Sbjct: 519 CTSNPDEKIEIRTSITGR 536


>ref|XP_006829101.1| hypothetical protein AMTR_s00001p00263560 [Amborella trichopoda]
           gi|548834080|gb|ERM96517.1| hypothetical protein
           AMTR_s00001p00263560 [Amborella trichopoda]
          Length = 627

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = -2

Query: 424 EEIKEKLRNWADVSM-RGTYSTESIGSVAMVAKACVEEDPYDRPSVAEIVYRLSNALDGC 248
           E  +E+LR W D  +   + S ES+ +VA+VA+ACV +DP  RPS+A++VY LS A + C
Sbjct: 548 ENKEERLRGWMDGRLFDDSCSVESVMNVAVVARACVSKDPSKRPSLADVVYILSKADELC 607

Query: 247 -----QSDDSVNIFLPVDAR 203
                 S DS+++   V AR
Sbjct: 608 FDLSSASHDSISVNSGVTAR 627


Top