BLASTX nr result
ID: Ephedra25_contig00007068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00007068
(2371 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,... 214 1e-52
gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea] 209 6e-51
ref|XP_006847921.1| hypothetical protein AMTR_s00029p00120280 [A... 202 7e-49
ref|XP_002302931.1| predicted protein [Populus trichocarpa] 199 6e-48
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 196 4e-47
emb|CBI15328.3| unnamed protein product [Vitis vinifera] 196 4e-47
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi... 195 7e-47
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi... 195 9e-47
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi... 193 3e-46
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta... 193 3e-46
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr... 192 6e-46
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi... 192 6e-46
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar... 192 7e-46
gb|AAM63453.1| unknown [Arabidopsis thaliana] 191 1e-45
gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus... 191 2e-45
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps... 191 2e-45
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ... 190 3e-45
gb|AFK45023.1| unknown [Medicago truncatula] 190 3e-45
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi... 188 1e-44
gb|EMJ11126.1| hypothetical protein PRUPE_ppa004540mg [Prunus pe... 186 5e-44
>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 569
Score = 214 bits (545), Expect = 1e-52
Identities = 159/523 (30%), Positives = 249/523 (47%), Gaps = 6/523 (1%)
Frame = -2
Query: 2055 PLCIRRFSAMPEMENPETLNSETVNPETKSPKTKNP---EIKTPNSKNPERSGLGMFSEY 1885
P +F+ +P + + +++T+NP + NP I KNP L +
Sbjct: 88 PTHFPKFAFLP-LSLSKPFSTQTLNPNNNVLEDPNPIAQSISAELIKNPNSDSLSI---- 142
Query: 1884 SESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVL 1705
L ++ F + N++ +P ++ L+ L P+ G+ L
Sbjct: 143 ---------------LQRLNLHFSHINNSI-------TPSIILQTLN-LSPDAGRTVLGF 179
Query: 1704 YNWATQLPECKPNLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVK 1525
+ W ++ K E + F +F + D++S +L + D + K FE +V
Sbjct: 180 HQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDV------IGYKCFESMVN 233
Query: 1524 GLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYAD 1348
L+ K M F+RME +YG +R E +VK LCD GY + AE++VK A+
Sbjct: 234 RLVRAGRATKV----MGFFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLAN 289
Query: 1347 RFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCID 1168
+PDE I L+++G+C GKL DEA+R+ EM + VAYNA+L VCKLC +
Sbjct: 290 EIFPDENICDLLIKGWCVDGKL---DEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCRE 346
Query: 1167 REPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPE 988
++PF + EV K+ EM G+ N TFN+ + L +RKTQ A LF+RM E+G P+
Sbjct: 347 KDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPD 406
Query: 987 QFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKV 814
T+ +I++LY R +G E+ +M +GY L Y + IL R EHA+ V
Sbjct: 407 DTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSV 466
Query: 813 FWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXX 634
F MK G P K Y +L+ + + + LF+EAL++ V P ++
Sbjct: 467 FEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEALRNGV--PVAPKEYKVDEKYM 524
Query: 633 XXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
K+ T+ E K +R Q RLS+V+KPKK+ R
Sbjct: 525 KKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMRR 567
>gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea]
Length = 536
Score = 209 bits (531), Expect = 6e-51
Identities = 145/428 (33%), Positives = 216/428 (50%), Gaps = 4/428 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + +P L+ L+ + P+ G+ L WA P P E+F+ + +F + D+++
Sbjct: 118 SHVTVTPALLLATLN-ISPDAGRTVLDFLTWAKSRPGFSPTDEVFSYYVNYFGRRKDFKA 176
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
+L D RE + K FE IV L+ KAV LF+RME +YG ER+
Sbjct: 177 AHEVLA---DNRE---AVGVKCFEAIVDRLVRAGRPNKAVE----LFDRMEADYGFERSF 226
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
++ ++ LC+ G+ + AE++VK A F+PD I ++ G+C GKL DEARR+M
Sbjct: 227 DSLKHIISCLCERGHASHAEKMVKSLASEFFPDAYICDALISGWCIDGKL---DEARRLM 283
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
EM + T AYN+LL VC+LC +++ F + E KL EM+ G+ N TFN+
Sbjct: 284 NEMHRGGFEMTTFAYNSLLDCVCRLCREKDRFRLQSEAQKLLVEMERNGVPRNVDTFNVL 343
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +RKT+ A LF RM E+G P++ TY +IK+LY R +G ++ +M AGY
Sbjct: 344 ITNLCRIRKTEEAMNLFSRMGEWGCYPDETTYIVLIKSLYRAARISEGDDMMDRMKSAGY 403
Query: 891 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
L Y I +L R HAL VF MKE G P K Y +L+R+L +A
Sbjct: 404 GDALDKKVYYEFIRVLCGVERISHALAVFAKMKE-GCRPGIKTYDLLMRKLCAHGRVEKA 462
Query: 717 EQLFDEALKDHVFTPDMRQKI-MXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRL 541
L+ EA ++ V ++ T+ E K +R Q RL
Sbjct: 463 NALYKEAERNGVAVEPKEYRVDPKFVPTAKSAAAAKKTTTRETLPEKMARKRRRLKQIRL 522
Query: 540 SYVRKPKK 517
S+V+KPKK
Sbjct: 523 SFVKKPKK 530
>ref|XP_006847921.1| hypothetical protein AMTR_s00029p00120280 [Amborella trichopoda]
gi|548851226|gb|ERN09502.1| hypothetical protein
AMTR_s00029p00120280 [Amborella trichopoda]
Length = 466
Score = 202 bits (513), Expect = 7e-49
Identities = 144/477 (30%), Positives = 235/477 (49%), Gaps = 7/477 (1%)
Frame = -2
Query: 1914 RSGLGMFSEYSESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLP 1735
RS L + S + + + + EL++ D L+ L S ++ +P+ L H+L+
Sbjct: 12 RSSLRFSTIASHELELPLSWVKASELLHSDSP---LEENLGQSNIEPTPELLSHLLNT-S 67
Query: 1734 PEVGQKALVLYNWATQLPECK-PNLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALE 1558
P+ G+K L Y++A + P P+ E S +F + D+++I + +
Sbjct: 68 PKAGRKVLGFYSYALKHPSSFIPSDETSKSLVDYFGRRKDFKAINLLFSET-----PPAP 122
Query: 1557 LDGKTFECIVKGLIVGSGTIKAVRHAMILFNRMEEYGMERTPEAKNFLVKHLCDGGYGAE 1378
KTF ++ L+ +AV F ME+ G + +A V LC+ G+ E
Sbjct: 123 TGPKTFASVIDRLVRAGRAKQAVG----FFEDMEKLGFSKDKDALIVTVGSLCNHGFARE 178
Query: 1377 AEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNAL 1198
AEELVKR AD +PD+ I +V+G+C S KL DEA+R++ E+ + AYN++
Sbjct: 179 AEELVKRMADSIFPDQAICHALVKGWCVSEKL---DEAKRLVGEIYRGGFELGPTAYNSI 235
Query: 1197 LKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFH 1018
L+ VCKLC R+P + E K+ EM+ G+ N TFN+ + +RKTQVA LF
Sbjct: 236 LECVCKLCRKRDPLRLESETEKVLLEMETSGVARNTETFNVLIKSYCKIRKTQVAMNLFE 295
Query: 1017 RMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKS 838
M E+G SP+ TY +I++LY R +G E+ ++M +G+ + Y + +L
Sbjct: 296 SMSEWGCSPDSETYTLLIRSLYQAARLGEGDEMLEEMKASGFGVNIKTYYGFLKVLCGIE 355
Query: 837 RKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEA------LKDHVFT 676
R +HA+K+F MK+ G P + +L+ +L + +A++L EA +K V+
Sbjct: 356 RIDHAMKLFEMMKKDGCEPGSMTFDLLIWKLCVHGRAEQADKLCKEAEERGVTIKSAVYE 415
Query: 675 PDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
D R + T+ + K KR + RLS+V+KPKKL R
Sbjct: 416 VDPR--------FVEKKKVKKEKPKRETLPMKMERKRKRLRKLRLSFVKKPKKLMRR 464
>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 199 bits (505), Expect = 6e-48
Identities = 133/419 (31%), Positives = 213/419 (50%), Gaps = 3/419 (0%)
Frame = -2
Query: 1764 SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSIEYMLEKN 1585
SL+ KL P+ G+ + +NW + + N E F +F + D+++ +L
Sbjct: 107 SLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLV-- 164
Query: 1584 FDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVK 1408
E K FE ++ L+ T + + F RME +YG +R E+ F+V+
Sbjct: 165 ----EGKSVAGVKCFESMIDRLVRAGRTTQVIG----FFERMERDYGFKRDKESLTFVVQ 216
Query: 1407 HLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQL 1228
LC+ GY + AE++VK A+ +PD+ I L+++G+C GKL +EA+R+ EM
Sbjct: 217 KLCENGYASYAEKMVKNLANEIFPDDGICDLLIKGWCVDGKL---EEAKRLAGEMYRGGF 273
Query: 1227 KPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVR 1048
+ +A+NA+L VCKLC +++PF + EV K+ EM G+ N TFN+ + L VR
Sbjct: 274 EIGTMAFNAMLDCVCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVR 333
Query: 1047 KTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--F 874
+T+ A +LF R+ E+G P++ T+ +I++LY R +G E+ +M AGY L
Sbjct: 334 RTEDAMKLFSRIGEWGCCPDETTFLVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKA 393
Query: 873 YSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEAL 694
Y + IL R EHA+ VF MK G P K Y +L+ + + +A L++EAL
Sbjct: 394 YYGFLKILCGIERLEHAMSVFEMMKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEAL 453
Query: 693 KDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 517
+ V ++ K+ T+ E K +R Q RLS+V+KPKK
Sbjct: 454 SNGVTVTPKEYRV--DPKFMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 510
>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 196 bits (498), Expect = 4e-47
Identities = 133/428 (31%), Positives = 214/428 (50%), Gaps = 3/428 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + SP ++ L+ P+ G+ L Y W + P+ + E + F +F + D+++
Sbjct: 101 SHITPSPPLILQTLNT-SPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKA 159
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
I +L D R A KT E + L+ + V F+RME +YG R
Sbjct: 160 IHEVL---MDGRNFA---GAKTLESAIDRLVRAGRATQVVS----FFDRMEVDYGFRRDR 209
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
E+ +V LC+ G+ + AE++VK A+ +P+E I L+++G+C GKL DEARR+
Sbjct: 210 ESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKL---DEARRLA 266
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
+EM + +AYN++L +CKLC ++PF + E K+ +M G+ N TFN+
Sbjct: 267 EEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVL 326
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +RKT+ A +LF+RM E+G P + T+ + ++LY R +G E+ +M AG+
Sbjct: 327 ITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGF 386
Query: 891 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
L Y I IL R +HA+ +F MKE G P K Y +L+ +L +A
Sbjct: 387 GNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKA 446
Query: 717 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLS 538
LF EA+ V K+ K+ T+ E K +R + RLS
Sbjct: 447 NALFSEAVNRGVPVESKAYKL--DPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLS 504
Query: 537 YVRKPKKL 514
+V+KPK++
Sbjct: 505 FVKKPKRM 512
>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 196 bits (498), Expect = 4e-47
Identities = 133/428 (31%), Positives = 214/428 (50%), Gaps = 3/428 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + SP ++ L+ P+ G+ L Y W + P+ + E + F +F + D+++
Sbjct: 117 SHITPSPPLILQTLNT-SPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKA 175
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
I +L D R A KT E + L+ + V F+RME +YG R
Sbjct: 176 IHEVL---MDGRNFA---GAKTLESAIDRLVRAGRATQVVS----FFDRMEVDYGFRRDR 225
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
E+ +V LC+ G+ + AE++VK A+ +P+E I L+++G+C GKL DEARR+
Sbjct: 226 ESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKL---DEARRLA 282
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
+EM + +AYN++L +CKLC ++PF + E K+ +M G+ N TFN+
Sbjct: 283 EEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVL 342
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +RKT+ A +LF+RM E+G P + T+ + ++LY R +G E+ +M AG+
Sbjct: 343 ITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGF 402
Query: 891 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
L Y I IL R +HA+ +F MKE G P K Y +L+ +L +A
Sbjct: 403 GNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKA 462
Query: 717 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLS 538
LF EA+ V K+ K+ T+ E K +R + RLS
Sbjct: 463 NALFSEAVNRGVPVESKAYKL--DPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLS 520
Query: 537 YVRKPKKL 514
+V+KPK++
Sbjct: 521 FVKKPKRM 528
>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Solanum tuberosum]
Length = 521
Score = 195 bits (496), Expect = 7e-47
Identities = 141/467 (30%), Positives = 234/467 (50%), Gaps = 4/467 (0%)
Frame = -2
Query: 1893 SEYSESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKA 1714
S+ E+ + + E + EL + +S I L S + +P SLI L P+ G+
Sbjct: 70 SDQEETTAQSLSSELVKELDAESLS-IPQSLDLSFSHVNLTP-SLILTTLNLSPDAGRTV 127
Query: 1713 LVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDG-KTFE 1537
L + W K + E+ + F +F + D+++ + +L + + L G KT E
Sbjct: 128 LGFFKWVKSKESFKVDDEVVSYFVDYFGRRKDFKAAQDVLI-------DGIGLAGRKTLE 180
Query: 1536 CIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVK 1360
+V L+ + + V F ME +YG+ R ++ +V LC+ G+ + AE++VK
Sbjct: 181 SMVDRLVRAGRSTQTVA----FFENMEKDYGLVRDLDSLKLVVSRLCEHGFASYAEKMVK 236
Query: 1359 RYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCK 1180
A F+PDE I +++RG+C GKL DEA+R+ EM + AYNA+L VCK
Sbjct: 237 SLASEFFPDEYICDMLIRGWCIDGKL---DEAQRLAGEMYRGGFEIGASAYNAILDCVCK 293
Query: 1179 LCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFG 1000
LC ++PF + E + EM+ G+ + TFN+ + L +RKT+ A LF+RM E+G
Sbjct: 294 LCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGEWG 353
Query: 999 VSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEH 826
+P++ T+ T+I++LY R +G E+ +M AG+ L Y + IL R +H
Sbjct: 354 CNPDETTFLTLIRSLYQAARVGEGDEMIDRMKSAGFGDALDKKAYYEFLKILCGIERLDH 413
Query: 825 ALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXX 646
A+ VF MKE G P K Y +L+ ++ + +A L+ EA + + + + ++
Sbjct: 414 AMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEA-ESNELAVEPKAYMVHP 472
Query: 645 XXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
K+ T E K + + RLSYV+KPKK++ R
Sbjct: 473 KYAKKKSAPAKKEKKRETFPEKMARKRTKLKKIRLSYVKKPKKMARR 519
>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Solanum lycopersicum]
Length = 522
Score = 195 bits (495), Expect = 9e-47
Identities = 132/424 (31%), Positives = 211/424 (49%), Gaps = 4/424 (0%)
Frame = -2
Query: 1764 SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSIEYMLEKN 1585
SLI L P+ G+ L + W K + E+ + F +F + D+++ + +L
Sbjct: 111 SLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSCFVDYFGRRKDFKAAQDVLI-- 168
Query: 1584 FDKRENALELDG-KTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLV 1411
+ + L G KT E +V L+ + V F ME +YG+ R ++ +V
Sbjct: 169 -----DGIGLTGRKTLESMVDRLVRAGRPTQTVA----FFENMEKDYGLARDLDSLKLVV 219
Query: 1410 KHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQ 1231
LC+ G+ + AE++VK A F+PDE I ++VRG+C GKL DEA+R+ EM
Sbjct: 220 SRLCEHGFASYAEKMVKSLACEFFPDEYICDMLVRGWCIDGKL---DEAQRLAGEMYRGG 276
Query: 1230 LKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLV 1051
+ AYNA+L VCKLC ++PF + E + EM+ G+ + TFN+ + L +
Sbjct: 277 FEIGASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKI 336
Query: 1050 RKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG-- 877
RKT+ A LF+RM E+G +P++ T+ T+I++LY R +G E+ +M AG+ L
Sbjct: 337 RKTEDALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEGDEMIDRMRSAGFGDALDKK 396
Query: 876 FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEA 697
Y + IL R +HA+ VF MKE G P K Y +L+ ++ + +A L+ EA
Sbjct: 397 AYYEFLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEA 456
Query: 696 LKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 517
+ + + K+ T E K + + RLSYV+KPKK
Sbjct: 457 ESNDLAVEPKAYMVHPKYAKKKSAPAKKEEKKRETFPEKMARKRTKLKKIRLSYVKKPKK 516
Query: 516 LSTR 505
++ R
Sbjct: 517 MARR 520
>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Citrus sinensis]
Length = 503
Score = 193 bits (491), Expect = 3e-46
Identities = 138/451 (30%), Positives = 223/451 (49%), Gaps = 3/451 (0%)
Frame = -2
Query: 1848 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 1669
++E + D I + L+ S + +P SL+ PE G+ L +W TQ
Sbjct: 71 LLENLEADPLPISQRLHLIFSHVTPTP-SLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
Query: 1668 NLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAV 1489
E + F +F + D+++I L N + L KT + L+ +A
Sbjct: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV------LGPKTLASCIDRLV------RAG 177
Query: 1488 RHAMIL--FNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITS 1318
R +L F RME +YG +R ++ +V+ LC+ GY + AE+LVK A+ +PD++I
Sbjct: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
Query: 1317 LIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEV 1138
L+++G+C GKL DEA+R+ +EM + VAYN +L V KLC ++PF + E
Sbjct: 238 LLIKGWCVDGKL---DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
Query: 1137 CKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKA 958
K+ +M+ G+ N TFN+ + L +R+++ A +LF+RM E+G P + T+ +IK+
Sbjct: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
Query: 957 LYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 778
LY R +G E+ +M AGY Y + L R E A+ VF MK G P
Sbjct: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
Query: 777 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRG 598
+ Y +L+R+ + +A LFDEA+++ V ++ K+
Sbjct: 415 TETYDLLMRKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV--DPRYLKKPIAVKKGKKR 472
Query: 597 PTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
T+ E K +R Q RLS+V+KPK+ R
Sbjct: 473 ETLPEKMARKRRRLKQIRLSFVKKPKRTMMR 503
>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 494
Score = 193 bits (491), Expect = 3e-46
Identities = 143/447 (31%), Positives = 221/447 (49%), Gaps = 6/447 (1%)
Frame = -2
Query: 1839 LVNKDVSFIELKNTLVNSKLKTSPKSL-IHILSKLPPEVGQKALVLYNWATQLPECKPNL 1663
L N D+ + + L S P SL I L PE G+ L +W P
Sbjct: 60 LKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDWLLSDPNFNHTD 119
Query: 1662 ELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRH 1483
E + F +F + D+++ +L N KTFE V L+ +A R
Sbjct: 120 ETLSFFIDYFGRRKDFKAAHDLLVNNKSVA------GPKTFESSVDRLV------RAGRP 167
Query: 1482 AMIL--FNRM-EEYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLI 1312
A +L F M ++YG +R E+ +V+ LC+ GY + AE++VK A+ +PDE I L+
Sbjct: 168 AQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIFPDEMICDLL 227
Query: 1311 VRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCK 1132
++G+C GKL +EA+R+ EM + +AYNA+L VCKLC ++PF + E K
Sbjct: 228 IKGWCVDGKL---EEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKDPFRLHSEAEK 284
Query: 1131 LFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALY 952
+ +M G+ N TFN+ + L +RKT+ A +LF+RM E+G P+ +Y +I++LY
Sbjct: 285 VLLDMDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGEWGCYPDAESYLILIRSLY 344
Query: 951 YQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 778
R +G E+ +M AG+ LG Y + + IL R EHA+ VF MK G P
Sbjct: 345 QAARVAEGDEMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFKKMKADGCKPG 404
Query: 777 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRG 598
K Y +L+ + + RA L++EA+++ V P + K+
Sbjct: 405 IKTYDLLMGKWCGHNRLDRANALYNEAVENGV--PVEPKPYRVDPRYMKKTKAVKEEKKR 462
Query: 597 PTIAEMKKIKIKRDTQKRLSYVRKPKK 517
T+ E K +R Q RLS+V+KPK+
Sbjct: 463 ETLPEKMARKRRRLKQIRLSFVKKPKR 489
>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
gi|557543056|gb|ESR54034.1| hypothetical protein
CICLE_v10019809mg [Citrus clementina]
Length = 503
Score = 192 bits (488), Expect = 6e-46
Identities = 138/451 (30%), Positives = 222/451 (49%), Gaps = 3/451 (0%)
Frame = -2
Query: 1848 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 1669
++E + D I + L+ S + +P SL+ PE G+ L +W TQ
Sbjct: 71 LLENLEADPLPISQRLHLIFSHVTPTP-SLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
Query: 1668 NLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAV 1489
E + F +F + D+++I L N + L KT + L+ +A
Sbjct: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV------LGPKTLASCIDRLV------RAG 177
Query: 1488 RHAMIL--FNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITS 1318
R +L F RME +YG +R ++ +V+ LC+ GY + AE+LVK A+ +PD++I
Sbjct: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
Query: 1317 LIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEV 1138
L+++G+C GKL DEA+R+ EM + VAYN +L V KLC ++PF + E
Sbjct: 238 LLIKGWCVDGKL---DEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
Query: 1137 CKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKA 958
K+ +M+ G+ N TFN+ + L +R+T+ A +LF+RM E+G P + T+ +IK+
Sbjct: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKS 354
Query: 957 LYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 778
LY R +G E+ +M AGY Y + L R E A+ VF MK G P
Sbjct: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
Query: 777 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRG 598
+ Y +L+ + + +A LFDEA+++ V ++ K+
Sbjct: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV--DPRYLKKPIAVKKGKKR 472
Query: 597 PTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
T+ E K +R Q RLS+V+KPK++ R
Sbjct: 473 ETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 517
Score = 192 bits (488), Expect = 6e-46
Identities = 136/436 (31%), Positives = 211/436 (48%), Gaps = 4/436 (0%)
Frame = -2
Query: 1812 ELKNTLVNSKLKTSPK-SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFW 1636
++ TL +S +P SL+ + L E G+ L W P E + F +
Sbjct: 92 DVTKTLQSSFPNVTPTPSLVLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLSYFVDY 151
Query: 1635 FSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME 1456
F + D+++ ++ + D KT + L+ +AV +F +ME
Sbjct: 152 FGRRKDFKATHDVILSSRDVA------GPKTLAASIDRLVRAGRPAQAVS----MFEKME 201
Query: 1455 E-YGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLG 1279
E YG++R A +V+ LC+ G+ + AE++VK + F+PDE + L+++G+C GKL
Sbjct: 202 EEYGIKRDKAALRLVVEKLCEYGFASNAEKMVKGLVNEFFPDEYMCDLLIKGWCVDGKL- 260
Query: 1278 NYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGIT 1099
DEARR+ EM + A+NA+L VCKLC ++PF + E ++ +M G+
Sbjct: 261 --DEARRLAGEMYRGGFEIGTSAFNAILDCVCKLCRKKDPFRLHSEAEQILVDMDYHGVP 318
Query: 1098 PNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHEL 919
N TFN+ + L +RKT A LFHRM E+G SP + T+ + ++LY R +G E+
Sbjct: 319 RNVETFNVLITNLCKIRKTNDALNLFHRMGEWGCSPNETTFLELTRSLYQAARVGEGDEM 378
Query: 918 RQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRL 745
+M AG+ L Y + IL R +HAL VF MK+ G P K Y +L+ +L
Sbjct: 379 IDRMKSAGFGEALDKKAYFGFLKILCGIERIDHALSVFKKMKQDGCEPGIKTYDLLMGKL 438
Query: 744 WMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKI 565
+ + RA LF+EA K V + K T+ E K
Sbjct: 439 YAQNRADRATALFNEAQKKEV---PVTHKTYQVDSKYLKKPKAKKENTRETLPEKMARKR 495
Query: 564 KRDTQKRLSYVRKPKK 517
+R Q RLS+V+KPKK
Sbjct: 496 RRLKQIRLSFVKKPKK 511
>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein PNM1,
mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO THE
NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product
[Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 521
Score = 192 bits (487), Expect = 7e-46
Identities = 137/433 (31%), Positives = 211/433 (48%), Gaps = 3/433 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 103 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG 161
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
+ ++ K GKT E + L V +G K V F +ME +YG++R
Sbjct: 162 MLEIISKYKGIA------GGKTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 211
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
E+ +VK LC+ G+ + AE++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 212 ESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKL---DEATRLA 268
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 269 GEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +R+T+ A LF RM E+G P+ TY +I++LY R +G E+ KM AGY
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 891 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
L Y + IL R EHA+ VF +MK G P K Y +L+ ++ ++ RA
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 717 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLS 538
L+ EA K + ++ K+ T+ E K KR Q +S
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRLKQINMS 508
Query: 537 YVRKPKKLSTRRI 499
+V+KP RR+
Sbjct: 509 FVKKPHNKMRRRM 521
>gb|AAM63453.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 191 bits (486), Expect = 1e-45
Identities = 137/433 (31%), Positives = 211/433 (48%), Gaps = 3/433 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 103 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG 161
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
+ ++ K GKT E + L V +G K V F +ME +YG++R
Sbjct: 162 MLGIISKYKGIA------GGKTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 211
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
E+ +VK LC+ G+ + AE++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 212 ESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKL---DEATRLA 268
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 269 GEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +R+T+ A LF RM E+G P+ TY +I++LY R +G E+ KM AGY
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 891 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
L Y + IL R EHA+ VF +MK G P K Y +L+ ++ ++ RA
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 717 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLS 538
L+ EA K + ++ K+ T+ E K KR Q +S
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRLKQINMS 508
Query: 537 YVRKPKKLSTRRI 499
+V+KP RR+
Sbjct: 509 FVKKPHNKMRRRM 521
>gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
Length = 505
Score = 191 bits (484), Expect = 2e-45
Identities = 140/459 (30%), Positives = 225/459 (49%), Gaps = 11/459 (2%)
Frame = -2
Query: 1848 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 1669
+++ ++ D + + L S + +P ++ L+ L P+ G+ L + W + P+
Sbjct: 71 LLKELDSDPLSVSQRLHLSFSHITPTPNLILQTLN-LSPQAGRTVLGFHQWLSSNPQFTH 129
Query: 1668 NLELFNSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAV 1489
+ F +F + D+++ +L A KT E + L+ +AV
Sbjct: 130 TDHTLSYFVDYFGRRKDFKATHDLLSAA------AAASGPKTLESAIDRLVRAGRPSQAV 183
Query: 1488 RHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLI 1312
+ F RME +YG++R + +V+ LC G+ + AE++VK A F+PDE L+
Sbjct: 184 Q----FFERMERDYGLKRDRCSLKVVVEKLCSKGFASYAEKMVKELAREFFPDEATCDLL 239
Query: 1311 VRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCK 1132
+RG+C GKL +EA+R+ EM + AYNA+L VCKLC +++ F + E K
Sbjct: 240 IRGWCVDGKL---EEAQRLAGEMYRGGFELGVGAYNAMLDCVCKLCREKDLFRLDSEAEK 296
Query: 1131 LFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALY 952
+ EM+ G+ N TFN+ + L +RKT+ A LF M E+G SP + T+ +I++LY
Sbjct: 297 VLVEMEYRGVPRNVETFNVLITNLCKIRKTEDALNLFSSMGEWGCSPNESTFLVLIRSLY 356
Query: 951 YQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 778
R E+G E+ +M AGY L Y + IL R +HAL VF MK G VP
Sbjct: 357 QAARLEEGDEMIDRMRSAGYGEFLDKKAYYQFLKILCGIERIDHALSVFAMMKADGCVPG 416
Query: 777 KKIYSILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXX 622
+ Y +L+ +L + RA LF+EA LKD+ P ++K
Sbjct: 417 VQTYDLLMGKLGAHNRIDRANALFNEAKTRGLPVILKDYAVDPRYQKK----------KR 466
Query: 621 XXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
K+ T+ E K +R Q RLS+V+KP++ R
Sbjct: 467 VVKAVKKRETLPEKMARKRRRLNQIRLSFVKKPQRAMGR 505
>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
gi|482550779|gb|EOA14973.1| hypothetical protein
CARUB_v10028321mg [Capsella rubella]
Length = 522
Score = 191 bits (484), Expect = 2e-45
Identities = 137/433 (31%), Positives = 214/433 (49%), Gaps = 3/433 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 104 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSSNGFSHTDETVSYFVDYFGRRKDFKG 162
Query: 1608 IEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 1432
+ ++ K + A KT E + L V +G K V F +ME +YG++R
Sbjct: 163 MLEIISK-YKGISGA-----KTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 212
Query: 1431 EAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 1252
E+ +VK LC+ G+ + AE++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 213 ESLTLVVKKLCEKGHASIAEKMVKNTANDIFPDENICDLLISGWCTAEKL---DEATRLA 269
Query: 1251 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1072
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 270 GEMSRGGFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 329
Query: 1071 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 892
+ L +R+T+ A LF RM E+G P+ TY +IK+LY R +G E+ KM AGY
Sbjct: 330 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIKSLYQAARIGEGDEMIDKMKSAGY 389
Query: 891 TGTL--GFYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 718
+ +L Y + IL R EHA+ VF MK G+ P K Y +L+ ++ ++ RA
Sbjct: 390 SESLTKKEYYGFLKILCGIERLEHAMSVFKNMKANGIKPGIKTYDLLMGKMCANNQLTRA 449
Query: 717 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLS 538
L+ EA K + ++ K+ T+ E K +R Q +S
Sbjct: 450 NGLYKEAAKKGIAVSPKEYRVDPRFLKKKTKEVDSNVKKRETLPEKTARKRRRLKQINMS 509
Query: 537 YVRKPKKLSTRRI 499
+V+KP RR+
Sbjct: 510 FVKKPHNKMRRRM 522
>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524375|gb|AET04829.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 190 bits (482), Expect = 3e-45
Identities = 140/450 (31%), Positives = 216/450 (48%), Gaps = 11/450 (2%)
Frame = -2
Query: 1833 NKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELF 1654
+ D S + + L S + +P ++ L+ L E G+ L + W P+ E
Sbjct: 92 DSDPSSVTQRLNLSFSHITPTPNLILETLN-LSLEAGRNVLGFHQWLASNPKFTHTDETL 150
Query: 1653 NSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMI 1474
+ F +F + D+++ + +L + KT V L+ +AV+
Sbjct: 151 SYFVDYFGRRKDFKATDKILSGGGGGQ--------KTLLSAVDRLVRAGRQSQAVQ---- 198
Query: 1473 LFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYC 1297
F RME +YG++R + +V+ LC GY + AE++ A F+PDE+I L+V GYC
Sbjct: 199 FFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYC 258
Query: 1296 RSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEM 1117
GK+ +EARR+ EM + AYNA+L VCK+C +++PF + E K+ EM
Sbjct: 259 IDGKI---EEARRLAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEM 315
Query: 1116 KAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRT 937
+ G+ N TFN+ + +RKT A LF+ M ++ +P + T+ +IK+LY R
Sbjct: 316 DSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARL 375
Query: 936 EDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYS 763
E+G + M AGY L Y + IL R HALK+F MK G P K Y
Sbjct: 376 EEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYD 435
Query: 762 ILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXXXXXXX 607
+L+++L D +A LF+EA LK+HV P +K
Sbjct: 436 LLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDPRFSKK--------KEKKAVKAE 487
Query: 606 KRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 517
K+ T+ E K +R Q RLS+V+KPKK
Sbjct: 488 KKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>gb|AFK45023.1| unknown [Medicago truncatula]
Length = 521
Score = 190 bits (482), Expect = 3e-45
Identities = 140/450 (31%), Positives = 216/450 (48%), Gaps = 11/450 (2%)
Frame = -2
Query: 1833 NKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELF 1654
+ D S + + L S + +P ++ L+ L E G+ L + W P+ E
Sbjct: 92 DSDPSSVTQRLNLSFSHITPTPNLILETLN-LSLEAGRNVLGFHQWLASNPKFTHTDETL 150
Query: 1653 NSFAFWFSKVDDYRSIEYMLEKNFDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMI 1474
+ F +F + D+++ + +L + KT V L+ +AV+
Sbjct: 151 SYFVDYFGRRKDFKATDKILSGGGGGQ--------KTLLSAVDRLVRAGRQSQAVQ---- 198
Query: 1473 LFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYC 1297
F RME +YG++R + +V+ LC GY + AE++ A F+PDE+I L+V GYC
Sbjct: 199 FFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYC 258
Query: 1296 RSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEM 1117
GK+ +EARR+ EM + AYNA+L VCK+C +++PF + E K+ EM
Sbjct: 259 IDGKI---EEARRLAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEM 315
Query: 1116 KAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRT 937
+ G+ N TFN+ + +RKT A LF+ M ++ +P + T+ +IK+LY R
Sbjct: 316 DSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARL 375
Query: 936 EDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYS 763
E+G + M AGY L Y + IL R HALK+F MK G P K Y
Sbjct: 376 EEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYD 435
Query: 762 ILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXXXXXXX 607
+L+++L D +A LF+EA LK+HV P +K
Sbjct: 436 LLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDPRFSKK--------KEKKAVKAE 487
Query: 606 KRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 517
K+ T+ E K +R Q RLS+V+KPKK
Sbjct: 488 KKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
gi|449477122|ref|XP_004154936.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
Length = 522
Score = 188 bits (477), Expect = 1e-44
Identities = 135/428 (31%), Positives = 211/428 (49%), Gaps = 4/428 (0%)
Frame = -2
Query: 1788 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 1609
S +K +P+ + + L+ L E G+ L W P+ E + F +F + D+ +
Sbjct: 106 SHVKPNPELVRNTLN-LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNA 164
Query: 1608 IEYMLEKNFDKRENALELDG-KTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERT 1435
++ +L K L ++G KT + + K + F ME YG++R
Sbjct: 165 VQEVLAKG-------LGINGPKTLKSSIHRFARAGRPTKLIS----FFETMETNYGLKRD 213
Query: 1434 PEAKNFLVKHLCDGGYGAEAEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRV 1255
E+ +V+ LC+ G+G+ AE++VK A+ F+PDE I +++G+C + KL DEA+R+
Sbjct: 214 KESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKL---DEAKRL 270
Query: 1254 MKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNI 1075
EM + AYNALL VCKLC ++PF + E ++ EM G+ N TFN+
Sbjct: 271 AGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNV 330
Query: 1074 ALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAG 895
+ L +R+T A LFHRM E+G P T+ +I++LY RT +G E+ +M G
Sbjct: 331 LINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVG 390
Query: 894 YTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEAR 721
Y L Y + IL R +HAL VF MK+ G P K Y +L+ +L + +
Sbjct: 391 YGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDK 450
Query: 720 AEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRL 541
A LF+EA K V P + K+ T+ E K +R Q RL
Sbjct: 451 ANSLFNEAQKRGV--PVTPKAYQVDPKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRL 508
Query: 540 SYVRKPKK 517
S+V+KP++
Sbjct: 509 SFVKKPRR 516
>gb|EMJ11126.1| hypothetical protein PRUPE_ppa004540mg [Prunus persica]
Length = 504
Score = 186 bits (471), Expect = 5e-44
Identities = 124/353 (35%), Positives = 185/353 (52%), Gaps = 5/353 (1%)
Frame = -2
Query: 1548 KTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAEAE 1372
KTF + L+ +AV F RME +YG++R + +V+ LC+ G+ + AE
Sbjct: 160 KTFASSIDRLVRAGRPAQAVS----FFERMEKDYGLKRDKTSLRLVVEKLCENGFASNAE 215
Query: 1371 ELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLK 1192
++VK A+ F+PDE I L+++G+C GKL +EARR+ EM + AYNA+L
Sbjct: 216 KMVKSLANEFFPDEYICDLLIKGWCIDGKL---EEARRLAGEMYRGGFEIGTTAYNAILD 272
Query: 1191 MVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRM 1012
V KLC ++PF + E ++ +M G+ N TFN+ + L +RKT+ A LFHRM
Sbjct: 273 CVSKLCRKKDPFRLHSEAEQILVDMDTHGVPRNVETFNVLISNLCKLRKTEDALNLFHRM 332
Query: 1011 EEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKS 838
E+G P + T+ +I++LY R +G E+ +M AG+ G L Y + IL
Sbjct: 333 GEWGCYPNETTFLVLIRSLYQGARIGEGDEMIDRMKSAGFGGALDKKAYYGFMKILCGIE 392
Query: 837 RKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQK 658
R +HA++VF MKE G P K Y +L+ +L+ + RA LF+EA K V + QK
Sbjct: 393 RIDHAMRVFKKMKEDGCEPGIKSYDLLMGKLYAHNRADRATALFNEAQKRGV---PLTQK 449
Query: 657 I--MXXXXXXXXXXXXXXXKRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 505
K+ T E K +R Q RLS+V+KPKK+ R
Sbjct: 450 AYQADPRFLKKKPKAAKKEKKRETFPEKMARKKRRLKQIRLSFVKKPKKMMRR 502